Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC11.82□□□□□ -0.52
Trub1Q8C0D0 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC11.82□□□□□ -0.52
Trub1Q8C0D0 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC11.82□□□□□ -0.52
Trub1Q8C0D0 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trub1Q8C0D0 9130204K15Rik-202ENSMUST00000150312 696 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trub1Q8C0D0 Cdpf1-205ENSMUST00000150995 566 ntAPPRIS P1 TSL 3 BASIC11.82□□□□□ -0.52
Trub1Q8C0D0 Rxrg-201ENSMUST00000015987 2110 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trub1Q8C0D0 Gm3685-201ENSMUST00000169215 984 ntAPPRIS P5 TSL 5 BASIC11.82□□□□□ -0.52
Trub1Q8C0D0 Gm37590-201ENSMUST00000193294 603 ntTSL 5 BASIC11.82□□□□□ -0.52
Trub1Q8C0D0 Gm6439-201ENSMUST00000199849 862 ntBASIC11.82□□□□□ -0.52
Trub1Q8C0D0 Gm44506-201ENSMUST00000206278 965 ntBASIC11.82□□□□□ -0.52
Trub1Q8C0D0 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC11.82□□□□□ -0.52
Trub1Q8C0D0 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC11.82□□□□□ -0.52
Trub1Q8C0D0 Pgam2-201ENSMUST00000020768 840 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trub1Q8C0D0 Gm45338-206ENSMUST00000211460 1155 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trub1Q8C0D0 Gm4065-201ENSMUST00000218715 763 ntTSL 2 BASIC11.82□□□□□ -0.52
Trub1Q8C0D0 AC148334.1-201ENSMUST00000220853 370 ntTSL 5 BASIC11.82□□□□□ -0.52
Trub1Q8C0D0 4833405L11Rik-202ENSMUST00000222639 2145 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trub1Q8C0D0 Gm1821-202ENSMUST00000227415 750 ntBASIC11.82□□□□□ -0.52
Trub1Q8C0D0 Dnali1-201ENSMUST00000036383 2133 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trub1Q8C0D0 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trub1Q8C0D0 Tagln3-201ENSMUST00000096057 1240 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trub1Q8C0D0 Gm10338-201ENSMUST00000096148 984 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
Trub1Q8C0D0 Pram1-201ENSMUST00000052079 2278 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trub1Q8C0D0 Knop1-206ENSMUST00000126792 3253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trub1Q8C0D0 Atp6v1a-201ENSMUST00000063661 3896 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trub1Q8C0D0 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Trub1Q8C0D0 Ing1-204ENSMUST00000210041 1881 ntTSL 5 BASIC11.82□□□□□ -0.52
Trub1Q8C0D0 CT009489.1-201ENSMUST00000227740 1893 ntBASIC11.82□□□□□ -0.52
Trub1Q8C0D0 Gm44663-201ENSMUST00000206898 3150 ntBASIC11.82□□□□□ -0.52
Trub1Q8C0D0 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trub1Q8C0D0 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trub1Q8C0D0 Slc35a4-201ENSMUST00000036158 2462 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trub1Q8C0D0 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trub1Q8C0D0 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Trub1Q8C0D0 Gm28424-201ENSMUST00000187393 1319 ntBASIC11.82□□□□□ -0.52
Trub1Q8C0D0 Zp3-201ENSMUST00000005073 1323 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trub1Q8C0D0 Srebf1-201ENSMUST00000020846 4299 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trub1Q8C0D0 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC11.82□□□□□ -0.52
Trub1Q8C0D0 Serpine1-202ENSMUST00000077523 2697 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Trub1Q8C0D0 Agpat3-211ENSMUST00000166360 3439 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trub1Q8C0D0 Wdr82-201ENSMUST00000020490 3747 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trub1Q8C0D0 Pla2g15-201ENSMUST00000034377 2706 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trub1Q8C0D0 Gm13684-201ENSMUST00000152569 2264 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trub1Q8C0D0 Sh2d2a-202ENSMUST00000107581 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trub1Q8C0D0 Prdx2-201ENSMUST00000005292 1500 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trub1Q8C0D0 Vps54-201ENSMUST00000006221 4323 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trub1Q8C0D0 Palld-202ENSMUST00000121200 4193 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trub1Q8C0D0 Fkbp15-204ENSMUST00000107461 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trub1Q8C0D0 Gm37600-201ENSMUST00000193764 3292 ntBASIC11.81□□□□□ -0.52
Trub1Q8C0D0 Pofut1-201ENSMUST00000049863 5600 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trub1Q8C0D0 Inpp4a-211ENSMUST00000168546 2964 ntTSL 5 BASIC11.81□□□□□ -0.52
Trub1Q8C0D0 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trub1Q8C0D0 Pla2g4a-202ENSMUST00000111926 2835 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trub1Q8C0D0 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trub1Q8C0D0 AC153380.1-201ENSMUST00000214959 2364 ntBASIC11.81□□□□□ -0.52
Trub1Q8C0D0 Inca1-202ENSMUST00000108541 1150 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trub1Q8C0D0 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trub1Q8C0D0 Gm12463-201ENSMUST00000118271 849 ntBASIC11.81□□□□□ -0.52
Trub1Q8C0D0 Inca1-205ENSMUST00000126114 1189 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trub1Q8C0D0 Spdye4c-203ENSMUST00000178601 1020 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trub1Q8C0D0 Gm5732-201ENSMUST00000182596 1007 ntBASIC11.81□□□□□ -0.52
Trub1Q8C0D0 Gpx1-204ENSMUST00000193987 653 ntTSL 3 BASIC11.81□□□□□ -0.52
Trub1Q8C0D0 Klk1b19-ps-201ENSMUST00000205322 696 ntBASIC11.81□□□□□ -0.52
Trub1Q8C0D0 Gm35060-201ENSMUST00000207669 825 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Trub1Q8C0D0 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC11.81□□□□□ -0.52
Trub1Q8C0D0 Gm8342-201ENSMUST00000209839 757 ntBASIC11.81□□□□□ -0.52
Trub1Q8C0D0 Gm5996-201ENSMUST00000211110 718 ntBASIC11.81□□□□□ -0.52
Trub1Q8C0D0 AC102569.1-201ENSMUST00000221563 685 ntBASIC11.81□□□□□ -0.52
Trub1Q8C0D0 AC166344.1-201ENSMUST00000223745 674 ntBASIC11.81□□□□□ -0.52
Trub1Q8C0D0 Uqcc1-201ENSMUST00000006036 808 ntTSL 5 BASIC11.81□□□□□ -0.52
Trub1Q8C0D0 Inca1-201ENSMUST00000073625 1218 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trub1Q8C0D0 Olfr411-201ENSMUST00000080365 1049 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Trub1Q8C0D0 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trub1Q8C0D0 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trub1Q8C0D0 Cage1-201ENSMUST00000074969 2856 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Trub1Q8C0D0 Ap2b1-206ENSMUST00000176523 2742 ntTSL 5 BASIC11.81□□□□□ -0.52
Trub1Q8C0D0 Gm8110-202ENSMUST00000211297 1782 ntTSL 5 BASIC11.81□□□□□ -0.52
Trub1Q8C0D0 Gm20498-203ENSMUST00000166664 2284 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
Trub1Q8C0D0 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC11.81□□□□□ -0.52
Trub1Q8C0D0 Slc6a5-202ENSMUST00000107605 2467 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trub1Q8C0D0 Fut2-201ENSMUST00000069800 2955 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trub1Q8C0D0 Gm7538-201ENSMUST00000200918 1348 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trub1Q8C0D0 Gm19178-201ENSMUST00000217524 1819 ntBASIC11.81□□□□□ -0.52
Trub1Q8C0D0 Frmpd2-203ENSMUST00000208577 5192 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Trub1Q8C0D0 Eef2k-203ENSMUST00000106488 2537 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trub1Q8C0D0 Enpp5-201ENSMUST00000024756 2534 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trub1Q8C0D0 Gm29358-202ENSMUST00000187941 3227 ntBASIC11.81□□□□□ -0.52
Trub1Q8C0D0 Btg2-201ENSMUST00000020692 2743 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trub1Q8C0D0 Nsd3-210ENSMUST00000153597 1865 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trub1Q8C0D0 Rnf13-210ENSMUST00000200497 2573 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trub1Q8C0D0 Akr1c6-201ENSMUST00000021630 1396 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trub1Q8C0D0 Lox-201ENSMUST00000025409 3604 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trub1Q8C0D0 Tmcc1-208ENSMUST00000173140 1910 ntTSL 5 BASIC11.8□□□□□ -0.52
Trub1Q8C0D0 Ankrd55-202ENSMUST00000056047 1556 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trub1Q8C0D0 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trub1Q8C0D0 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trub1Q8C0D0 Unkl-204ENSMUST00000160896 4787 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trub1Q8C0D0 Gm18642-201ENSMUST00000206642 1400 ntBASIC11.8□□□□□ -0.52
Trub1Q8C0D0 Ddx56-201ENSMUST00000004507 1956 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 1014.8 ms