Protein–RNA interactions for Protein: Q8BRE0

Rd3, Protein RD3, mousemouse

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rd3Q8BRE0 Iqgap3-201ENSMUST00000071812 5756 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rd3Q8BRE0 Pfkfb2-208ENSMUST00000187089 1690 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Rd3Q8BRE0 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Rd3Q8BRE0 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rd3Q8BRE0 Zc3h12a-201ENSMUST00000036188 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rd3Q8BRE0 AC156031.2-201ENSMUST00000213107 3310 ntBASIC12.17□□□□□ -0.46
Rd3Q8BRE0 Palb2-204ENSMUST00000106469 2559 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rd3Q8BRE0 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rd3Q8BRE0 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Rd3Q8BRE0 Gm13351-201ENSMUST00000118087 414 ntBASIC12.17□□□□□ -0.46
Rd3Q8BRE0 Gm11980-201ENSMUST00000121445 986 ntBASIC12.17□□□□□ -0.46
Rd3Q8BRE0 Gm16271-201ENSMUST00000162837 220 ntTSL 5 BASIC12.17□□□□□ -0.46
Rd3Q8BRE0 Gm23694-201ENSMUST00000179335 110 ntBASIC12.17□□□□□ -0.46
Rd3Q8BRE0 Gm10100-201ENSMUST00000179726 363 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Rd3Q8BRE0 Mir7051-201ENSMUST00000184167 73 ntBASIC12.17□□□□□ -0.46
Rd3Q8BRE0 A930005H10Rik-204ENSMUST00000185681 625 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Rd3Q8BRE0 A930005H10Rik-206ENSMUST00000188260 739 ntTSL 2 BASIC12.17□□□□□ -0.46
Rd3Q8BRE0 Cdipt-204ENSMUST00000206346 806 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Rd3Q8BRE0 1700026F02Rik-203ENSMUST00000211950 1082 ntTSL 5 BASIC12.17□□□□□ -0.46
Rd3Q8BRE0 Pbld1-206ENSMUST00000219687 788 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Rd3Q8BRE0 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rd3Q8BRE0 Gm25201-201ENSMUST00000083093 170 ntBASIC12.17□□□□□ -0.46
Rd3Q8BRE0 Rbm47-209ENSMUST00000201544 5211 ntAPPRIS P3 TSL 5 BASIC12.17□□□□□ -0.46
Rd3Q8BRE0 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Rd3Q8BRE0 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Rd3Q8BRE0 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Rd3Q8BRE0 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rd3Q8BRE0 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rd3Q8BRE0 Col15a1-203ENSMUST00000107730 1755 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Rd3Q8BRE0 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
Rd3Q8BRE0 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Rd3Q8BRE0 Mfsd14b-203ENSMUST00000155487 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rd3Q8BRE0 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rd3Q8BRE0 Neu2-207ENSMUST00000172222 1715 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rd3Q8BRE0 Gm2464-201ENSMUST00000180838 2551 ntTSL 5 BASIC12.17□□□□□ -0.46
Rd3Q8BRE0 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rd3Q8BRE0 Prr5l-210ENSMUST00000171088 4296 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Rd3Q8BRE0 Wbp1l-204ENSMUST00000138302 3900 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rd3Q8BRE0 Gm5740-201ENSMUST00000211003 1857 ntBASIC12.17□□□□□ -0.46
Rd3Q8BRE0 Pofut1-201ENSMUST00000049863 5600 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rd3Q8BRE0 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Rd3Q8BRE0 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Rd3Q8BRE0 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Rd3Q8BRE0 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC12.16□□□□□ -0.46
Rd3Q8BRE0 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rd3Q8BRE0 Cd93-201ENSMUST00000099269 6677 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rd3Q8BRE0 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC12.16□□□□□ -0.46
Rd3Q8BRE0 Gm1110-201ENSMUST00000115261 1996 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Rd3Q8BRE0 Tle6-210ENSMUST00000142948 1961 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rd3Q8BRE0 Rgr-203ENSMUST00000225070 4704 ntBASIC12.16□□□□□ -0.46
Rd3Q8BRE0 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rd3Q8BRE0 Becn1-205ENSMUST00000130916 4365 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rd3Q8BRE0 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rd3Q8BRE0 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Rd3Q8BRE0 Sun3-202ENSMUST00000102909 1205 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rd3Q8BRE0 Churc1-203ENSMUST00000126408 462 ntTSL 2 BASIC12.16□□□□□ -0.46
Rd3Q8BRE0 Mrpl20-202ENSMUST00000130188 442 ntTSL 3 BASIC12.16□□□□□ -0.46
Rd3Q8BRE0 2810403D21Rik-208ENSMUST00000153212 1005 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Rd3Q8BRE0 Gm16553-201ENSMUST00000160490 716 ntTSL 3 BASIC12.16□□□□□ -0.46
Rd3Q8BRE0 Gm20400-201ENSMUST00000173695 665 ntTSL 3 BASIC12.16□□□□□ -0.46
Rd3Q8BRE0 Gm21844-201ENSMUST00000178699 663 ntTSL 3 BASIC12.16□□□□□ -0.46
Rd3Q8BRE0 5730585A16Rik-201ENSMUST00000193457 1027 ntBASIC12.16□□□□□ -0.46
Rd3Q8BRE0 Gm37013-201ENSMUST00000194544 313 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Rd3Q8BRE0 Crcp-204ENSMUST00000202163 931 ntTSL 2 BASIC12.16□□□□□ -0.46
Rd3Q8BRE0 Gm18968-201ENSMUST00000221319 862 ntBASIC12.16□□□□□ -0.46
Rd3Q8BRE0 Mitd1-201ENSMUST00000027257 1231 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rd3Q8BRE0 Rps10-ps1-201ENSMUST00000074353 495 ntBASIC12.16□□□□□ -0.46
Rd3Q8BRE0 Gm16380-201ENSMUST00000077997 478 ntBASIC12.16□□□□□ -0.46
Rd3Q8BRE0 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rd3Q8BRE0 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rd3Q8BRE0 Asz1-201ENSMUST00000010940 1736 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rd3Q8BRE0 Rpap1-202ENSMUST00000099529 4813 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rd3Q8BRE0 Mpv17l-204ENSMUST00000141971 2155 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Rd3Q8BRE0 Dixdc1-203ENSMUST00000117646 5719 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Rd3Q8BRE0 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Rd3Q8BRE0 P2rx7-203ENSMUST00000100737 4936 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rd3Q8BRE0 Gm17213-201ENSMUST00000165161 1360 ntBASIC12.16□□□□□ -0.46
Rd3Q8BRE0 Dopey2-207ENSMUST00000227156 7340 ntBASIC12.16□□□□□ -0.46
Rd3Q8BRE0 Tbl2-204ENSMUST00000153183 7488 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rd3Q8BRE0 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rd3Q8BRE0 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rd3Q8BRE0 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rd3Q8BRE0 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rd3Q8BRE0 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rd3Q8BRE0 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rd3Q8BRE0 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rd3Q8BRE0 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Rd3Q8BRE0 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Rd3Q8BRE0 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rd3Q8BRE0 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Rd3Q8BRE0 Numa1-201ENSMUST00000084852 7180 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rd3Q8BRE0 Lmbr1-201ENSMUST00000055195 4926 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rd3Q8BRE0 Gm18294-201ENSMUST00000176980 1748 ntBASIC12.15□□□□□ -0.46
Rd3Q8BRE0 Gpr158-201ENSMUST00000055946 7171 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rd3Q8BRE0 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC12.15□□□□□ -0.46
Rd3Q8BRE0 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC12.15□□□□□ -0.46
Rd3Q8BRE0 Trmt10b-202ENSMUST00000107800 983 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Rd3Q8BRE0 Rfc4-202ENSMUST00000115337 416 ntTSL 5 BASIC12.15□□□□□ -0.46
Rd3Q8BRE0 Gm12274-201ENSMUST00000120062 385 ntBASIC12.15□□□□□ -0.46
Rd3Q8BRE0 Nhp2-202ENSMUST00000127405 1042 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms