Protein–RNA interactions for Protein: Q8BQM7

Smco3, Single-pass membrane and coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco3Q8BQM7 A430105I19Rik-201ENSMUST00000059997 4703 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Smco3Q8BQM7 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Smco3Q8BQM7 Ccdc15-206ENSMUST00000217238 1747 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Smco3Q8BQM7 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
Smco3Q8BQM7 Gm38192-201ENSMUST00000194364 1847 ntBASIC9.44□□□□□ -0.9
Smco3Q8BQM7 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Smco3Q8BQM7 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC9.44□□□□□ -0.9
Smco3Q8BQM7 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Smco3Q8BQM7 Pcgf2-206ENSMUST00000169807 2347 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Smco3Q8BQM7 Anxa6-201ENSMUST00000102727 2471 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Smco3Q8BQM7 Ldb2-204ENSMUST00000199256 2596 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Smco3Q8BQM7 Pck1-201ENSMUST00000029017 2661 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Smco3Q8BQM7 Tex10-206ENSMUST00000164866 3203 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Smco3Q8BQM7 Mkx-201ENSMUST00000079788 3202 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Smco3Q8BQM7 Slit2-208ENSMUST00000173107 9960 ntAPPRIS P3 TSL 1 (best) BASIC9.44□□□□□ -0.9
Smco3Q8BQM7 Kif1b-203ENSMUST00000060537 10233 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Smco3Q8BQM7 Dysf-215ENSMUST00000204591 6641 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
Smco3Q8BQM7 Spaar-201ENSMUST00000131248 4086 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Smco3Q8BQM7 Gm32856-201ENSMUST00000212145 3767 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Smco3Q8BQM7 Tia1-206ENSMUST00000113713 3108 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Smco3Q8BQM7 Prrxl1-204ENSMUST00000189022 2985 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Smco3Q8BQM7 Slc38a3-201ENSMUST00000010208 2585 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Smco3Q8BQM7 Slc22a14-201ENSMUST00000093775 2213 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Smco3Q8BQM7 Cacna1c-206ENSMUST00000185345 6579 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
Smco3Q8BQM7 Tank-203ENSMUST00000112495 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Smco3Q8BQM7 Gm43143-201ENSMUST00000196083 2023 ntBASIC9.43□□□□□ -0.9
Smco3Q8BQM7 Helz-202ENSMUST00000100305 5953 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Smco3Q8BQM7 Gm13553-201ENSMUST00000133025 1970 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Smco3Q8BQM7 Tmcc1-208ENSMUST00000173140 1910 ntTSL 5 BASIC9.43□□□□□ -0.9
Smco3Q8BQM7 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC9.43□□□□□ -0.9
Smco3Q8BQM7 Ikbkg-204ENSMUST00000114128 1867 ntAPPRIS ALT2 TSL 2 BASIC9.43□□□□□ -0.9
Smco3Q8BQM7 Firre-206ENSMUST00000203933 5555 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Smco3Q8BQM7 Gm14023-201ENSMUST00000144178 1781 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Smco3Q8BQM7 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC9.43□□□□□ -0.9
Smco3Q8BQM7 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Smco3Q8BQM7 Eno3-201ENSMUST00000072841 1454 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Smco3Q8BQM7 Gm18626-201ENSMUST00000221512 1409 ntBASIC9.43□□□□□ -0.9
Smco3Q8BQM7 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Smco3Q8BQM7 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Smco3Q8BQM7 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC9.43□□□□□ -0.9
Smco3Q8BQM7 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Smco3Q8BQM7 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Smco3Q8BQM7 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC9.43□□□□□ -0.9
Smco3Q8BQM7 Rs1-202ENSMUST00000112368 731 ntTSL 3 BASIC9.43□□□□□ -0.9
Smco3Q8BQM7 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Smco3Q8BQM7 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC9.43□□□□□ -0.9
Smco3Q8BQM7 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Smco3Q8BQM7 Gm27682-201ENSMUST00000183930 110 ntBASIC9.43□□□□□ -0.9
Smco3Q8BQM7 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC9.43□□□□□ -0.9
Smco3Q8BQM7 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC9.43□□□□□ -0.9
Smco3Q8BQM7 Gm43692-201ENSMUST00000198236 1062 ntBASIC9.43□□□□□ -0.9
Smco3Q8BQM7 Gm45059-201ENSMUST00000205558 1077 ntBASIC9.43□□□□□ -0.9
Smco3Q8BQM7 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC9.43□□□□□ -0.9
Smco3Q8BQM7 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC9.43□□□□□ -0.9
Smco3Q8BQM7 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC9.43□□□□□ -0.9
Smco3Q8BQM7 Tyms-ps-201ENSMUST00000219550 915 ntBASIC9.43□□□□□ -0.9
Smco3Q8BQM7 AC154239.3-201ENSMUST00000226933 674 ntBASIC9.43□□□□□ -0.9
Smco3Q8BQM7 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Smco3Q8BQM7 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Smco3Q8BQM7 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Smco3Q8BQM7 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Smco3Q8BQM7 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Smco3Q8BQM7 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Smco3Q8BQM7 Zdhhc21-201ENSMUST00000030110 8763 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Smco3Q8BQM7 Pde4c-201ENSMUST00000034307 3203 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Smco3Q8BQM7 Ctnnd1-223ENSMUST00000111697 5294 ntTSL 5 BASIC9.43□□□□□ -0.9
Smco3Q8BQM7 Pkn3-201ENSMUST00000045246 3113 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Smco3Q8BQM7 Ank3-242ENSMUST00000183261 4999 ntTSL 5 BASIC9.43□□□□□ -0.9
Smco3Q8BQM7 1110051M20Rik-201ENSMUST00000064652 2896 ntAPPRIS ALT1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Smco3Q8BQM7 Ccdc186-202ENSMUST00000118592 6445 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
Smco3Q8BQM7 Cacna1d-204ENSMUST00000223803 6435 ntAPPRIS ALT2 BASIC9.43□□□□□ -0.9
Smco3Q8BQM7 Ncf1-202ENSMUST00000111275 2721 ntAPPRIS P3 TSL 1 (best) BASIC9.43□□□□□ -0.9
Smco3Q8BQM7 Synj2-203ENSMUST00000115784 2634 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Smco3Q8BQM7 Dennd1c-201ENSMUST00000011623 2520 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Smco3Q8BQM7 Gm26631-201ENSMUST00000181462 2505 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Smco3Q8BQM7 Pou6f1-201ENSMUST00000058274 2523 ntTSL 2 BASIC9.43□□□□□ -0.9
Smco3Q8BQM7 Olfr315-202ENSMUST00000203256 2458 ntAPPRIS P1 TSL 3 BASIC9.43□□□□□ -0.9
Smco3Q8BQM7 Bace1-202ENSMUST00000078111 4041 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Smco3Q8BQM7 Ces3a-201ENSMUST00000093222 2046 ntAPPRIS P4 TSL 1 (best) BASIC9.43□□□□□ -0.9
Smco3Q8BQM7 Ndst3-202ENSMUST00000124803 1917 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Smco3Q8BQM7 Phf20-201ENSMUST00000037401 5737 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Smco3Q8BQM7 Cd276-201ENSMUST00000039788 3186 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Smco3Q8BQM7 Dspp-201ENSMUST00000112771 4431 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Smco3Q8BQM7 Ptpn21-201ENSMUST00000085116 5696 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Smco3Q8BQM7 Lama3-201ENSMUST00000092070 10548 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
Smco3Q8BQM7 Entpd4-201ENSMUST00000064831 1842 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
Smco3Q8BQM7 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Smco3Q8BQM7 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Smco3Q8BQM7 Mab21l2-201ENSMUST00000077524 2703 ntAPPRIS P1 BASIC9.42□□□□□ -0.9
Smco3Q8BQM7 Chd2-203ENSMUST00000169922 9085 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
Smco3Q8BQM7 Camk2g-201ENSMUST00000071816 3703 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Smco3Q8BQM7 Sirpa-201ENSMUST00000049262 3644 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Smco3Q8BQM7 Mical1-203ENSMUST00000119962 3565 ntAPPRIS ALT2 TSL 5 BASIC9.42□□□□□ -0.9
Smco3Q8BQM7 Tas1r2-202ENSMUST00000166773 2524 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Smco3Q8BQM7 Isl1-201ENSMUST00000036060 2516 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Smco3Q8BQM7 Gm8706-201ENSMUST00000197372 1491 ntBASIC9.42□□□□□ -0.9
Smco3Q8BQM7 Odf2l-204ENSMUST00000106192 2425 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
Smco3Q8BQM7 Stk4-201ENSMUST00000018353 5232 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Smco3Q8BQM7 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC9.42□□□□□ -0.9
Smco3Q8BQM7 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC9.42□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 68.4 ms