Protein–RNA interactions for Protein: Q8BK35

Nop53, Ribosome biogenesis protein NOP53, mousemouse

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nop53Q8BK35 Ctnnal1-201ENSMUST00000045142 3664 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Nop53Q8BK35 Ptprg-201ENSMUST00000022264 9213 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Nop53Q8BK35 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Nop53Q8BK35 AC123619.2-202ENSMUST00000225097 1568 ntBASIC12.38□□□□□ -0.43
Nop53Q8BK35 Gcnt7-201ENSMUST00000099060 2220 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Nop53Q8BK35 Clvs2-204ENSMUST00000161692 4283 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Nop53Q8BK35 Xpc-201ENSMUST00000032182 3634 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Nop53Q8BK35 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Nop53Q8BK35 Adra2b-202ENSMUST00000104934 4014 ntAPPRIS ALT2 BASIC12.38□□□□□ -0.43
Nop53Q8BK35 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Nop53Q8BK35 Scpep1-201ENSMUST00000000287 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Nop53Q8BK35 Gm2822-201ENSMUST00000164299 2910 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Nop53Q8BK35 AC122811.1-201ENSMUST00000222257 2921 ntBASIC12.38□□□□□ -0.43
Nop53Q8BK35 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Nop53Q8BK35 Enam-201ENSMUST00000031222 5483 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Nop53Q8BK35 Robo1-201ENSMUST00000023600 7563 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nop53Q8BK35 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Nop53Q8BK35 Slc26a11-201ENSMUST00000050880 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nop53Q8BK35 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nop53Q8BK35 Kirrel3-209ENSMUST00000190549 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nop53Q8BK35 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Nop53Q8BK35 Carns1-201ENSMUST00000167055 3968 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Nop53Q8BK35 Serpina1f-202ENSMUST00000117053 2830 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Nop53Q8BK35 Tln2-205ENSMUST00000215267 4999 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Nop53Q8BK35 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
Nop53Q8BK35 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nop53Q8BK35 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Nop53Q8BK35 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Nop53Q8BK35 Gm24990-201ENSMUST00000157406 323 ntBASIC12.37□□□□□ -0.43
Nop53Q8BK35 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nop53Q8BK35 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nop53Q8BK35 Gm6548-201ENSMUST00000167498 1165 ntBASIC12.37□□□□□ -0.43
Nop53Q8BK35 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Nop53Q8BK35 Gm16505-201ENSMUST00000179981 232 ntBASIC12.37□□□□□ -0.43
Nop53Q8BK35 Gm2260-201ENSMUST00000184965 657 ntBASIC12.37□□□□□ -0.43
Nop53Q8BK35 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Nop53Q8BK35 1700029E06Rik-201ENSMUST00000189036 757 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Nop53Q8BK35 5830411K02Rik-201ENSMUST00000200000 997 ntBASIC12.37□□□□□ -0.43
Nop53Q8BK35 B230112I24Rik-201ENSMUST00000203953 1229 ntBASIC12.37□□□□□ -0.43
Nop53Q8BK35 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC12.37□□□□□ -0.43
Nop53Q8BK35 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nop53Q8BK35 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nop53Q8BK35 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
Nop53Q8BK35 Awat2-202ENSMUST00000147103 1984 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Nop53Q8BK35 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Nop53Q8BK35 Thsd4-206ENSMUST00000171654 8522 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Nop53Q8BK35 Dzip1l-202ENSMUST00000112884 3791 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Nop53Q8BK35 Dclk1-204ENSMUST00000196745 7962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nop53Q8BK35 Dntt-201ENSMUST00000051806 2128 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Nop53Q8BK35 Zmym3-209ENSMUST00000121520 5564 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Nop53Q8BK35 Rsc1a1-201ENSMUST00000105782 1749 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Nop53Q8BK35 Spem2-201ENSMUST00000056941 1640 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nop53Q8BK35 Nefm-202ENSMUST00000111089 3680 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nop53Q8BK35 Tfr2-206ENSMUST00000198783 2973 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nop53Q8BK35 Zfp366-201ENSMUST00000056558 6382 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nop53Q8BK35 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nop53Q8BK35 Unc79-202ENSMUST00000101099 8874 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nop53Q8BK35 Dnajb6-201ENSMUST00000008733 2918 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Nop53Q8BK35 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nop53Q8BK35 Akap5-203ENSMUST00000172992 2711 ntAPPRIS ALT2 TSL 3 BASIC12.36□□□□□ -0.43
Nop53Q8BK35 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC12.36□□□□□ -0.43
Nop53Q8BK35 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Nop53Q8BK35 Sgk1-213ENSMUST00000164659 2602 ntTSL 5 BASIC12.36□□□□□ -0.43
Nop53Q8BK35 Dach2-201ENSMUST00000067219 2520 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nop53Q8BK35 Samd4b-201ENSMUST00000040531 4349 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Nop53Q8BK35 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC12.36□□□□□ -0.43
Nop53Q8BK35 Fen1-202ENSMUST00000116542 2100 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nop53Q8BK35 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC12.36□□□□□ -0.43
Nop53Q8BK35 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC12.36□□□□□ -0.43
Nop53Q8BK35 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Nop53Q8BK35 Vmn1r-ps8-201ENSMUST00000177200 838 ntBASIC12.36□□□□□ -0.43
Nop53Q8BK35 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC12.36□□□□□ -0.43
Nop53Q8BK35 Gm9678-201ENSMUST00000198979 1149 ntBASIC12.36□□□□□ -0.43
Nop53Q8BK35 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC12.36□□□□□ -0.43
Nop53Q8BK35 Rps4l-202ENSMUST00000204242 789 ntBASIC12.36□□□□□ -0.43
Nop53Q8BK35 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Nop53Q8BK35 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Nop53Q8BK35 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC12.36□□□□□ -0.43
Nop53Q8BK35 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC12.36□□□□□ -0.43
Nop53Q8BK35 Mettl6-204ENSMUST00000227595 1027 ntBASIC12.36□□□□□ -0.43
Nop53Q8BK35 AC123665.1-201ENSMUST00000228204 438 ntBASIC12.36□□□□□ -0.43
Nop53Q8BK35 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nop53Q8BK35 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nop53Q8BK35 Pip5k1a-204ENSMUST00000107232 3437 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Nop53Q8BK35 Abi1-209ENSMUST00000140164 3403 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nop53Q8BK35 Zfp217-202ENSMUST00000109155 5670 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nop53Q8BK35 Art2b-202ENSMUST00000209526 2819 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Nop53Q8BK35 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Nop53Q8BK35 Pla2g15-201ENSMUST00000034377 2706 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nop53Q8BK35 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nop53Q8BK35 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC12.36□□□□□ -0.43
Nop53Q8BK35 Ttpa-201ENSMUST00000098244 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nop53Q8BK35 Zfp189-202ENSMUST00000107696 2965 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nop53Q8BK35 Spats2l-211ENSMUST00000169772 2311 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nop53Q8BK35 Abca2-201ENSMUST00000102919 8033 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nop53Q8BK35 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC12.35□□□□□ -0.43
Nop53Q8BK35 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nop53Q8BK35 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nop53Q8BK35 Fam53c-201ENSMUST00000049281 4475 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nop53Q8BK35 Gm21136-201ENSMUST00000186812 2575 ntBASIC12.35□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 72.8 ms