Protein–RNA interactions for Protein: Q8BJF9

Chmp2b, Charged multivesicular body protein 2b, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2bQ8BJF9 A1cf-202ENSMUST00000224304 2968 ntAPPRIS ALT1 BASIC11.75□□□□□ -0.53
Chmp2bQ8BJF9 Myo18a-207ENSMUST00000102488 7409 ntAPPRIS P3 TSL 5 BASIC11.75□□□□□ -0.53
Chmp2bQ8BJF9 Kat6b-201ENSMUST00000069648 7649 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Chmp2bQ8BJF9 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC11.75□□□□□ -0.53
Chmp2bQ8BJF9 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Chmp2bQ8BJF9 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC11.75□□□□□ -0.53
Chmp2bQ8BJF9 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC11.75□□□□□ -0.53
Chmp2bQ8BJF9 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Chmp2bQ8BJF9 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Chmp2bQ8BJF9 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Chmp2bQ8BJF9 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC11.75□□□□□ -0.53
Chmp2bQ8BJF9 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC11.75□□□□□ -0.53
Chmp2bQ8BJF9 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC11.75□□□□□ -0.53
Chmp2bQ8BJF9 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Chmp2bQ8BJF9 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC11.75□□□□□ -0.53
Chmp2bQ8BJF9 Gm6450-201ENSMUST00000200896 574 ntBASIC11.75□□□□□ -0.53
Chmp2bQ8BJF9 Gm44974-201ENSMUST00000206387 1279 ntBASIC11.75□□□□□ -0.53
Chmp2bQ8BJF9 Hcst-203ENSMUST00000208740 366 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Chmp2bQ8BJF9 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC11.75□□□□□ -0.53
Chmp2bQ8BJF9 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Chmp2bQ8BJF9 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Chmp2bQ8BJF9 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Chmp2bQ8BJF9 Ranbp10-201ENSMUST00000041400 5308 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Chmp2bQ8BJF9 Mab21l2-201ENSMUST00000077524 2703 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Chmp2bQ8BJF9 Amotl1-201ENSMUST00000013220 8957 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Chmp2bQ8BJF9 Aar2-202ENSMUST00000109570 2766 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Chmp2bQ8BJF9 Rgs12-203ENSMUST00000114280 2777 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Chmp2bQ8BJF9 Adgrv1-214ENSMUST00000224088 1492 ntBASIC11.75□□□□□ -0.53
Chmp2bQ8BJF9 Acox3-203ENSMUST00000114237 2956 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Chmp2bQ8BJF9 Neu2-206ENSMUST00000166259 1596 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Chmp2bQ8BJF9 Nme1-203ENSMUST00000135884 3181 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Chmp2bQ8BJF9 9530082P21Rik-203ENSMUST00000181605 3162 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Chmp2bQ8BJF9 Spata5-202ENSMUST00000108112 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Chmp2bQ8BJF9 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Chmp2bQ8BJF9 Papln-202ENSMUST00000121733 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Chmp2bQ8BJF9 Pnpla6-201ENSMUST00000004681 4438 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Chmp2bQ8BJF9 Serpina1b-202ENSMUST00000164454 1760 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Chmp2bQ8BJF9 Tpd52l2-202ENSMUST00000069712 1799 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Chmp2bQ8BJF9 L3mbtl1-201ENSMUST00000035751 2724 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Chmp2bQ8BJF9 Exoc3l4-201ENSMUST00000072646 2778 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Chmp2bQ8BJF9 Tmcc1-208ENSMUST00000173140 1910 ntTSL 5 BASIC11.74□□□□□ -0.53
Chmp2bQ8BJF9 Olfr1495-202ENSMUST00000215930 2025 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Chmp2bQ8BJF9 Uba1-201ENSMUST00000001989 4071 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Chmp2bQ8BJF9 Zfp612-201ENSMUST00000058804 3180 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Chmp2bQ8BJF9 Gm35850-202ENSMUST00000211705 2120 ntBASIC11.74□□□□□ -0.53
Chmp2bQ8BJF9 Gm26846-201ENSMUST00000181865 4869 ntTSL 5 BASIC11.74□□□□□ -0.53
Chmp2bQ8BJF9 Gm22133-201ENSMUST00000102082 109 ntBASIC11.74□□□□□ -0.53
Chmp2bQ8BJF9 Gm13296-201ENSMUST00000117854 997 ntBASIC11.74□□□□□ -0.53
Chmp2bQ8BJF9 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Chmp2bQ8BJF9 Gm25700-201ENSMUST00000177693 110 ntBASIC11.74□□□□□ -0.53
Chmp2bQ8BJF9 Gm4310-201ENSMUST00000177847 889 ntBASIC11.74□□□□□ -0.53
Chmp2bQ8BJF9 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC11.74□□□□□ -0.53
Chmp2bQ8BJF9 Gm5982-201ENSMUST00000196234 512 ntBASIC11.74□□□□□ -0.53
Chmp2bQ8BJF9 Gm42629-201ENSMUST00000199063 1102 ntBASIC11.74□□□□□ -0.53
Chmp2bQ8BJF9 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Chmp2bQ8BJF9 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC11.74□□□□□ -0.53
Chmp2bQ8BJF9 Sgk1-213ENSMUST00000164659 2602 ntTSL 5 BASIC11.74□□□□□ -0.53
Chmp2bQ8BJF9 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Chmp2bQ8BJF9 Nmnat1-203ENSMUST00000119921 2657 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Chmp2bQ8BJF9 Gpr161-201ENSMUST00000111450 6862 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Chmp2bQ8BJF9 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC11.74□□□□□ -0.53
Chmp2bQ8BJF9 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC11.74□□□□□ -0.53
Chmp2bQ8BJF9 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Chmp2bQ8BJF9 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Chmp2bQ8BJF9 Gm1840-201ENSMUST00000051687 1432 ntBASIC11.74□□□□□ -0.53
Chmp2bQ8BJF9 Col6a6-202ENSMUST00000098441 8781 ntAPPRIS P2 TSL 5 BASIC11.74□□□□□ -0.53
Chmp2bQ8BJF9 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Chmp2bQ8BJF9 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Chmp2bQ8BJF9 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Chmp2bQ8BJF9 Abcc10-202ENSMUST00000095261 5266 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Chmp2bQ8BJF9 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Chmp2bQ8BJF9 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Chmp2bQ8BJF9 Tmod2-201ENSMUST00000064433 9884 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Chmp2bQ8BJF9 Myh2-201ENSMUST00000018641 6018 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Chmp2bQ8BJF9 Oas1d-201ENSMUST00000044224 2021 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Chmp2bQ8BJF9 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Chmp2bQ8BJF9 Maob-201ENSMUST00000040820 2411 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Chmp2bQ8BJF9 Slc12a7-201ENSMUST00000017900 5142 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Chmp2bQ8BJF9 D830039M14Rik-202ENSMUST00000217740 3362 ntBASIC11.73□□□□□ -0.53
Chmp2bQ8BJF9 Atp1a3-205ENSMUST00000196684 3642 ntTSL 5 BASIC11.73□□□□□ -0.53
Chmp2bQ8BJF9 Megf11-202ENSMUST00000093829 3652 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Chmp2bQ8BJF9 Pphln1-201ENSMUST00000049122 4023 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Chmp2bQ8BJF9 Tnpo3-201ENSMUST00000012679 4251 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Chmp2bQ8BJF9 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Chmp2bQ8BJF9 Anxa6-201ENSMUST00000102727 2471 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Chmp2bQ8BJF9 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Chmp2bQ8BJF9 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Chmp2bQ8BJF9 Jmjd4-202ENSMUST00000108777 4351 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Chmp2bQ8BJF9 Dclk3-201ENSMUST00000111879 3005 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Chmp2bQ8BJF9 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC11.73□□□□□ -0.53
Chmp2bQ8BJF9 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Chmp2bQ8BJF9 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC11.73□□□□□ -0.53
Chmp2bQ8BJF9 Gm13398-201ENSMUST00000149378 2837 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Chmp2bQ8BJF9 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
Chmp2bQ8BJF9 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Chmp2bQ8BJF9 Pknox1-206ENSMUST00000176701 4232 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Chmp2bQ8BJF9 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Chmp2bQ8BJF9 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Chmp2bQ8BJF9 Mir8093-201ENSMUST00000185043 137 ntBASIC11.73□□□□□ -0.53
Chmp2bQ8BJF9 Gm8856-201ENSMUST00000185254 1144 ntBASIC11.73□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms