Protein–RNA interactions for Protein: Q8BGE7

Trim6, Tripartite motif-containing protein 6, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim6Q8BGE7 Gm4607-201ENSMUST00000206649 577 ntBASIC12.2□□□□□ -0.46
Trim6Q8BGE7 Gm19187-201ENSMUST00000206781 892 ntBASIC12.2□□□□□ -0.46
Trim6Q8BGE7 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC12.2□□□□□ -0.46
Trim6Q8BGE7 Gm10254-201ENSMUST00000052888 867 ntBASIC12.2□□□□□ -0.46
Trim6Q8BGE7 Il4-201ENSMUST00000000889 590 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trim6Q8BGE7 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trim6Q8BGE7 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trim6Q8BGE7 Csnk1a1-204ENSMUST00000165123 4083 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trim6Q8BGE7 Vwa5b2-207ENSMUST00000159780 4042 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Trim6Q8BGE7 Cpt1c-201ENSMUST00000063761 2793 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trim6Q8BGE7 Lysmd4-202ENSMUST00000179106 3319 ntAPPRIS ALT2 TSL 2 BASIC12.2□□□□□ -0.46
Trim6Q8BGE7 Brat1-201ENSMUST00000041588 3333 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trim6Q8BGE7 Prkd2-201ENSMUST00000086104 3628 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trim6Q8BGE7 Ptprt-204ENSMUST00000109445 12082 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trim6Q8BGE7 Fdxacb1-201ENSMUST00000042391 2658 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trim6Q8BGE7 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trim6Q8BGE7 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Trim6Q8BGE7 Cep112-213ENSMUST00000150863 3453 ntTSL 5 BASIC12.2□□□□□ -0.46
Trim6Q8BGE7 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Trim6Q8BGE7 Cdk5rap1-201ENSMUST00000028990 1970 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trim6Q8BGE7 Vwa1-201ENSMUST00000042196 3623 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trim6Q8BGE7 Saxo2-201ENSMUST00000056728 2783 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trim6Q8BGE7 Slc1a4-201ENSMUST00000004634 3872 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trim6Q8BGE7 Olfr56-203ENSMUST00000179282 1935 ntTSL 5 BASIC12.19□□□□□ -0.46
Trim6Q8BGE7 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trim6Q8BGE7 Ptpn23-201ENSMUST00000040021 5346 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Trim6Q8BGE7 Prorsd1-202ENSMUST00000133103 2126 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trim6Q8BGE7 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trim6Q8BGE7 Tubgcp4-201ENSMUST00000039541 4206 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trim6Q8BGE7 Sipa1l2-202ENSMUST00000212168 6586 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trim6Q8BGE7 Mybpc3-203ENSMUST00000169776 4163 ntAPPRIS P2 TSL 5 BASIC12.19□□□□□ -0.46
Trim6Q8BGE7 Glb1l2-207ENSMUST00000162702 2555 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trim6Q8BGE7 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trim6Q8BGE7 Vmn1r207-ps-201ENSMUST00000119931 1073 ntBASIC12.19□□□□□ -0.46
Trim6Q8BGE7 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC12.19□□□□□ -0.46
Trim6Q8BGE7 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC12.19□□□□□ -0.46
Trim6Q8BGE7 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC12.19□□□□□ -0.46
Trim6Q8BGE7 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC12.19□□□□□ -0.46
Trim6Q8BGE7 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC12.19□□□□□ -0.46
Trim6Q8BGE7 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC12.19□□□□□ -0.46
Trim6Q8BGE7 4933401J01Rik-201ENSMUST00000193812 1070 ntBASIC12.19□□□□□ -0.46
Trim6Q8BGE7 Gm18187-201ENSMUST00000196476 984 ntBASIC12.19□□□□□ -0.46
Trim6Q8BGE7 AC132384.14-201ENSMUST00000219346 1147 ntBASIC12.19□□□□□ -0.46
Trim6Q8BGE7 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trim6Q8BGE7 Eif4g2-206ENSMUST00000161051 3548 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trim6Q8BGE7 Gm5703-201ENSMUST00000186658 3973 ntBASIC12.19□□□□□ -0.46
Trim6Q8BGE7 Gm10686-201ENSMUST00000215389 3247 ntBASIC12.19□□□□□ -0.46
Trim6Q8BGE7 Riox2-202ENSMUST00000120667 2200 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trim6Q8BGE7 Mfap3l-204ENSMUST00000161702 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trim6Q8BGE7 Bpnt1-201ENSMUST00000027916 2200 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trim6Q8BGE7 Steap3-203ENSMUST00000112641 5158 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trim6Q8BGE7 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trim6Q8BGE7 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trim6Q8BGE7 Aldoart2-201ENSMUST00000080123 1658 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Trim6Q8BGE7 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trim6Q8BGE7 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Trim6Q8BGE7 Mest-210ENSMUST00000157040 2383 ntAPPRIS ALT1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trim6Q8BGE7 Celf3-213ENSMUST00000199775 2351 ntAPPRIS ALT1 TSL 5 BASIC12.19□□□□□ -0.46
Trim6Q8BGE7 Myo15-203ENSMUST00000094135 11715 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Trim6Q8BGE7 B3galt5-201ENSMUST00000099497 5147 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trim6Q8BGE7 Vars2-201ENSMUST00000043674 4425 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trim6Q8BGE7 Dusp10-201ENSMUST00000048655 2792 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trim6Q8BGE7 Gm37333-201ENSMUST00000192904 2251 ntBASIC12.18□□□□□ -0.46
Trim6Q8BGE7 1810053B23Rik-205ENSMUST00000188056 1592 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trim6Q8BGE7 Sass6-204ENSMUST00000197335 2458 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trim6Q8BGE7 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trim6Q8BGE7 Gm43807-201ENSMUST00000200678 1781 ntBASIC12.18□□□□□ -0.46
Trim6Q8BGE7 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC12.18□□□□□ -0.46
Trim6Q8BGE7 Gm5441-201ENSMUST00000186454 5181 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trim6Q8BGE7 Chdh-202ENSMUST00000118917 3406 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trim6Q8BGE7 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trim6Q8BGE7 Gm13326-201ENSMUST00000118730 1011 ntBASIC12.18□□□□□ -0.46
Trim6Q8BGE7 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC12.18□□□□□ -0.46
Trim6Q8BGE7 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trim6Q8BGE7 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trim6Q8BGE7 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC12.18□□□□□ -0.46
Trim6Q8BGE7 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trim6Q8BGE7 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC12.18□□□□□ -0.46
Trim6Q8BGE7 Olfr812-202ENSMUST00000203571 1232 ntAPPRIS P1 TSL 3 BASIC12.18□□□□□ -0.46
Trim6Q8BGE7 Olfr284-202ENSMUST00000206647 966 ntBASIC12.18□□□□□ -0.46
Trim6Q8BGE7 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC12.18□□□□□ -0.46
Trim6Q8BGE7 AC153954.1-201ENSMUST00000216959 255 ntBASIC12.18□□□□□ -0.46
Trim6Q8BGE7 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trim6Q8BGE7 Gm28774-201ENSMUST00000187087 1498 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trim6Q8BGE7 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Trim6Q8BGE7 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trim6Q8BGE7 Pomt1-201ENSMUST00000036473 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trim6Q8BGE7 Dyrk4-202ENSMUST00000078521 2252 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trim6Q8BGE7 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trim6Q8BGE7 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trim6Q8BGE7 Gm10684-201ENSMUST00000098827 2203 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trim6Q8BGE7 Rap1gap-201ENSMUST00000047243 3247 ntAPPRIS P3 TSL 5 BASIC12.18□□□□□ -0.46
Trim6Q8BGE7 Xpc-201ENSMUST00000032182 3634 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trim6Q8BGE7 Amotl1-201ENSMUST00000013220 8957 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trim6Q8BGE7 Rnf40-206ENSMUST00000206914 3735 ntTSL 5 BASIC12.18□□□□□ -0.46
Trim6Q8BGE7 Capn15-201ENSMUST00000041641 3520 ntAPPRIS P3 TSL 5 BASIC12.17□□□□□ -0.46
Trim6Q8BGE7 Ncf1-202ENSMUST00000111275 2721 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trim6Q8BGE7 Lama4-201ENSMUST00000019992 6046 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trim6Q8BGE7 Cryz-201ENSMUST00000029850 2507 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trim6Q8BGE7 Thsd4-206ENSMUST00000171654 8522 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 70.8 ms