Protein–RNA interactions for Protein: Q8BGE6

Atg4b, Cysteine protease ATG4B, mousemouse

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4bQ8BGE6 Gm13869-201ENSMUST00000146978 1054 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Atg4bQ8BGE6 1700008K24Rik-201ENSMUST00000185974 833 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Atg4bQ8BGE6 Mir124-2hg-207ENSMUST00000189868 535 ntTSL 2 BASIC10.82□□□□□ -0.68
Atg4bQ8BGE6 Gm44008-201ENSMUST00000204345 412 ntBASIC10.82□□□□□ -0.68
Atg4bQ8BGE6 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC10.82□□□□□ -0.68
Atg4bQ8BGE6 Gm7395-201ENSMUST00000216059 1045 ntBASIC10.82□□□□□ -0.68
Atg4bQ8BGE6 Spcs1-203ENSMUST00000226374 592 ntBASIC10.82□□□□□ -0.68
Atg4bQ8BGE6 Ankrd7-201ENSMUST00000031489 1190 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Atg4bQ8BGE6 Olfr959-201ENSMUST00000079178 1055 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Atg4bQ8BGE6 Tcp11l1-202ENSMUST00000111118 5474 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Atg4bQ8BGE6 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Atg4bQ8BGE6 CT009489.1-201ENSMUST00000227740 1893 ntBASIC10.82□□□□□ -0.68
Atg4bQ8BGE6 Olfr1428-203ENSMUST00000214103 2127 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Atg4bQ8BGE6 Hs6st2-202ENSMUST00000114871 4351 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Atg4bQ8BGE6 Art3-202ENSMUST00000117108 1408 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Atg4bQ8BGE6 Art3-203ENSMUST00000118106 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Atg4bQ8BGE6 Grin1-208ENSMUST00000114318 3920 ntTSL 5 BASIC10.82□□□□□ -0.68
Atg4bQ8BGE6 Dsc2-202ENSMUST00000075214 4508 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Atg4bQ8BGE6 Adgrl3-210ENSMUST00000119788 5394 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Atg4bQ8BGE6 Pbrm1-208ENSMUST00000112098 6566 ntTSL 5 BASIC10.82□□□□□ -0.68
Atg4bQ8BGE6 Enpp5-201ENSMUST00000024756 2534 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Atg4bQ8BGE6 Gm43127-201ENSMUST00000195890 2789 ntBASIC10.82□□□□□ -0.68
Atg4bQ8BGE6 Lrp12-201ENSMUST00000022916 4109 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Atg4bQ8BGE6 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Atg4bQ8BGE6 Prdm1-201ENSMUST00000039174 5281 ntAPPRIS ALT2 TSL 2 BASIC10.81□□□□□ -0.68
Atg4bQ8BGE6 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Atg4bQ8BGE6 Galntl6-202ENSMUST00000098757 2210 ntTSL 5 BASIC10.81□□□□□ -0.68
Atg4bQ8BGE6 Slc25a21-205ENSMUST00000217690 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Atg4bQ8BGE6 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Atg4bQ8BGE6 Syne3-202ENSMUST00000095439 3357 ntAPPRIS P4 TSL 1 (best) BASIC10.81□□□□□ -0.68
Atg4bQ8BGE6 Telo2-202ENSMUST00000115181 3530 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Atg4bQ8BGE6 Tunar-201ENSMUST00000180458 3282 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Atg4bQ8BGE6 Sparcl1-201ENSMUST00000031249 2759 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Atg4bQ8BGE6 Ankrd60-201ENSMUST00000109112 833 ntAPPRIS ALT2 TSL 3 BASIC10.81□□□□□ -0.68
Atg4bQ8BGE6 Gm22711-201ENSMUST00000116890 133 ntBASIC10.81□□□□□ -0.68
Atg4bQ8BGE6 2900011O08Rik-202ENSMUST00000118412 954 ntTSL 3 BASIC10.81□□□□□ -0.68
Atg4bQ8BGE6 Olfr647-ps1-201ENSMUST00000121599 960 ntBASIC10.81□□□□□ -0.68
Atg4bQ8BGE6 Gm12316-201ENSMUST00000125853 406 ntTSL 5 BASIC10.81□□□□□ -0.68
Atg4bQ8BGE6 B9d1os-201ENSMUST00000137010 674 ntBASIC10.81□□□□□ -0.68
Atg4bQ8BGE6 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC10.81□□□□□ -0.68
Atg4bQ8BGE6 Gm16570-201ENSMUST00000161951 436 ntBASIC10.81□□□□□ -0.68
Atg4bQ8BGE6 Park2-204ENSMUST00000179624 1108 ntTSL 5 BASIC10.81□□□□□ -0.68
Atg4bQ8BGE6 Gapdh-ps14-201ENSMUST00000183246 1002 ntBASIC10.81□□□□□ -0.68
Atg4bQ8BGE6 Gm28287-201ENSMUST00000186612 546 ntTSL 5 BASIC10.81□□□□□ -0.68
Atg4bQ8BGE6 Gm37707-201ENSMUST00000195309 325 ntTSL 3 BASIC10.81□□□□□ -0.68
Atg4bQ8BGE6 Rbakdn-201ENSMUST00000198334 520 ntTSL 2 BASIC10.81□□□□□ -0.68
Atg4bQ8BGE6 Gm44506-201ENSMUST00000206278 965 ntBASIC10.81□□□□□ -0.68
Atg4bQ8BGE6 AC118639.2-201ENSMUST00000226289 223 ntBASIC10.81□□□□□ -0.68
Atg4bQ8BGE6 3830406C13Rik-209ENSMUST00000224389 2444 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Atg4bQ8BGE6 CT010498.2-201ENSMUST00000225690 1659 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Atg4bQ8BGE6 Pnmal2-201ENSMUST00000094807 4147 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Atg4bQ8BGE6 Herc4-201ENSMUST00000020258 3898 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Atg4bQ8BGE6 Susd4-201ENSMUST00000085724 2983 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Atg4bQ8BGE6 Vps54-202ENSMUST00000109578 4273 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Atg4bQ8BGE6 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Atg4bQ8BGE6 H2-M3-201ENSMUST00000038580 1438 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Atg4bQ8BGE6 Cd79b-201ENSMUST00000044228 1431 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Atg4bQ8BGE6 Stra6-202ENSMUST00000085677 2725 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Atg4bQ8BGE6 Kirrel2-201ENSMUST00000045817 3352 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Atg4bQ8BGE6 Hyal3-201ENSMUST00000040059 1830 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Atg4bQ8BGE6 Mgmt-201ENSMUST00000081510 2894 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Atg4bQ8BGE6 Recql4-201ENSMUST00000036852 3922 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Atg4bQ8BGE6 Cyp4f16-208ENSMUST00000169591 2242 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Atg4bQ8BGE6 Mfrp-201ENSMUST00000034654 4316 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Atg4bQ8BGE6 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Atg4bQ8BGE6 Cnga4-202ENSMUST00000210344 1977 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Atg4bQ8BGE6 A430028G04Rik-201ENSMUST00000219095 1973 ntBASIC10.81□□□□□ -0.68
Atg4bQ8BGE6 Cfb-202ENSMUST00000128767 2751 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Atg4bQ8BGE6 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Atg4bQ8BGE6 Stxbp5l-201ENSMUST00000023526 3344 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Atg4bQ8BGE6 Ttpa-201ENSMUST00000098244 3053 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Atg4bQ8BGE6 Muc3-201ENSMUST00000041226 1853 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Atg4bQ8BGE6 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Atg4bQ8BGE6 Cic-212ENSMUST00000169266 8221 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Atg4bQ8BGE6 Hist2h4-201ENSMUST00000171473 1630 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Atg4bQ8BGE6 Lgals12-201ENSMUST00000079902 2590 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Atg4bQ8BGE6 Gm37600-201ENSMUST00000193764 3292 ntBASIC10.8□□□□□ -0.68
Atg4bQ8BGE6 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Atg4bQ8BGE6 Gm43931-201ENSMUST00000204817 2870 ntBASIC10.8□□□□□ -0.68
Atg4bQ8BGE6 Atp4a-204ENSMUST00000170371 3447 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Atg4bQ8BGE6 Ankrd34c-202ENSMUST00000185470 2475 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Atg4bQ8BGE6 Batf2-201ENSMUST00000045042 1391 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Atg4bQ8BGE6 Sirt5-201ENSMUST00000066804 1367 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Atg4bQ8BGE6 Mad1l1-201ENSMUST00000031534 2640 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Atg4bQ8BGE6 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Atg4bQ8BGE6 Slc2a4-201ENSMUST00000018710 2524 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Atg4bQ8BGE6 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC10.8□□□□□ -0.68
Atg4bQ8BGE6 Agpat3-205ENSMUST00000105390 3513 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Atg4bQ8BGE6 Mapkapk5-203ENSMUST00000111782 969 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Atg4bQ8BGE6 Colca2-201ENSMUST00000114427 1263 ntAPPRIS P1 TSL 3 BASIC10.8□□□□□ -0.68
Atg4bQ8BGE6 Gm12247-201ENSMUST00000117585 670 ntBASIC10.8□□□□□ -0.68
Atg4bQ8BGE6 Gm9062-201ENSMUST00000117712 727 ntBASIC10.8□□□□□ -0.68
Atg4bQ8BGE6 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC10.8□□□□□ -0.68
Atg4bQ8BGE6 Gm12566-201ENSMUST00000121479 359 ntBASIC10.8□□□□□ -0.68
Atg4bQ8BGE6 Gm7666-201ENSMUST00000146631 819 ntBASIC10.8□□□□□ -0.68
Atg4bQ8BGE6 Gm18367-201ENSMUST00000176139 600 ntBASIC10.8□□□□□ -0.68
Atg4bQ8BGE6 Crnde-207ENSMUST00000180102 732 ntTSL 3 BASIC10.8□□□□□ -0.68
Atg4bQ8BGE6 Gm7504-201ENSMUST00000201449 424 ntBASIC10.8□□□□□ -0.68
Atg4bQ8BGE6 Hcst-203ENSMUST00000208740 366 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Atg4bQ8BGE6 2010001M07Rik-201ENSMUST00000214235 364 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 140 ms