Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Olfr538-201ENSMUST00000084457 933 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Nup98Q6PFD9 n-R5s71-201ENSMUST00000093668 119 ntBASIC13.3□□□□□ -0.28
Nup98Q6PFD9 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nup98Q6PFD9 Foxp1-201ENSMUST00000074346 2118 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Nup98Q6PFD9 Fhitos-201ENSMUST00000160149 1511 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Nup98Q6PFD9 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Nup98Q6PFD9 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nup98Q6PFD9 Acsm2-202ENSMUST00000098084 2099 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Nup98Q6PFD9 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Nup98Q6PFD9 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nup98Q6PFD9 Cars-202ENSMUST00000105909 2462 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nup98Q6PFD9 Trpc6-203ENSMUST00000217462 3168 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Nup98Q6PFD9 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nup98Q6PFD9 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Nup98Q6PFD9 Foxd2os-201ENSMUST00000123272 2908 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Nup98Q6PFD9 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nup98Q6PFD9 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nup98Q6PFD9 Trav12-3-201ENSMUST00000103657 442 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Nup98Q6PFD9 Gm12712-201ENSMUST00000120676 801 ntBASIC13.29□□□□□ -0.28
Nup98Q6PFD9 Gm15031-201ENSMUST00000121341 210 ntBASIC13.29□□□□□ -0.28
Nup98Q6PFD9 9230111E07Rik-201ENSMUST00000124850 811 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Nup98Q6PFD9 Nudt7-204ENSMUST00000134593 707 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nup98Q6PFD9 Gm13709-201ENSMUST00000138573 614 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Nup98Q6PFD9 4930571N24Rik-202ENSMUST00000142914 598 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Nup98Q6PFD9 Pfdn5-203ENSMUST00000165671 830 ntTSL 2 BASIC13.29□□□□□ -0.28
Nup98Q6PFD9 Gm23400-201ENSMUST00000174994 102 ntBASIC13.29□□□□□ -0.28
Nup98Q6PFD9 Gm26463-201ENSMUST00000175065 101 ntBASIC13.29□□□□□ -0.28
Nup98Q6PFD9 Gm24332-201ENSMUST00000175102 102 ntBASIC13.29□□□□□ -0.28
Nup98Q6PFD9 Gm25959-201ENSMUST00000175112 102 ntBASIC13.29□□□□□ -0.28
Nup98Q6PFD9 Gm22475-201ENSMUST00000175169 102 ntBASIC13.29□□□□□ -0.28
Nup98Q6PFD9 Gm22903-201ENSMUST00000175193 102 ntBASIC13.29□□□□□ -0.28
Nup98Q6PFD9 Gm25070-201ENSMUST00000175237 102 ntBASIC13.29□□□□□ -0.28
Nup98Q6PFD9 Gm24159-201ENSMUST00000175264 102 ntBASIC13.29□□□□□ -0.28
Nup98Q6PFD9 Gm25299-201ENSMUST00000175283 102 ntBASIC13.29□□□□□ -0.28
Nup98Q6PFD9 Gm23798-201ENSMUST00000175560 102 ntBASIC13.29□□□□□ -0.28
Nup98Q6PFD9 Gm23802-201ENSMUST00000175565 102 ntBASIC13.29□□□□□ -0.28
Nup98Q6PFD9 Gm25708-201ENSMUST00000177687 102 ntBASIC13.29□□□□□ -0.28
Nup98Q6PFD9 Gm24370-201ENSMUST00000178007 102 ntBASIC13.29□□□□□ -0.28
Nup98Q6PFD9 Gm23049-201ENSMUST00000178068 102 ntBASIC13.29□□□□□ -0.28
Nup98Q6PFD9 Gm28019-201ENSMUST00000178138 101 ntBASIC13.29□□□□□ -0.28
Nup98Q6PFD9 Gm25571-201ENSMUST00000178322 102 ntBASIC13.29□□□□□ -0.28
Nup98Q6PFD9 Gm25355-201ENSMUST00000178456 101 ntBASIC13.29□□□□□ -0.28
Nup98Q6PFD9 Gm24975-201ENSMUST00000178492 101 ntBASIC13.29□□□□□ -0.28
Nup98Q6PFD9 Gm23189-201ENSMUST00000178954 102 ntBASIC13.29□□□□□ -0.28
Nup98Q6PFD9 Gm25100-201ENSMUST00000179750 101 ntBASIC13.29□□□□□ -0.28
Nup98Q6PFD9 Gm23064-201ENSMUST00000179866 101 ntBASIC13.29□□□□□ -0.28
Nup98Q6PFD9 Prm2-202ENSMUST00000189593 674 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Nup98Q6PFD9 Gstz1-203ENSMUST00000220574 971 ntTSL 2 BASIC13.29□□□□□ -0.28
Nup98Q6PFD9 Gm6831-202ENSMUST00000213025 1673 ntBASIC13.29□□□□□ -0.28
Nup98Q6PFD9 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nup98Q6PFD9 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nup98Q6PFD9 Zfp93-201ENSMUST00000032696 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nup98Q6PFD9 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC13.29□□□□□ -0.28
Nup98Q6PFD9 Lta-201ENSMUST00000025266 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nup98Q6PFD9 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Nup98Q6PFD9 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nup98Q6PFD9 C5ar1-202ENSMUST00000168818 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nup98Q6PFD9 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nup98Q6PFD9 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC13.29□□□□□ -0.28
Nup98Q6PFD9 Gm31816-202ENSMUST00000209591 1332 ntTSL 5 BASIC13.29□□□□□ -0.28
Nup98Q6PFD9 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Nup98Q6PFD9 Pla2g7-201ENSMUST00000024706 2097 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nup98Q6PFD9 Dpysl4-201ENSMUST00000026551 3552 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nup98Q6PFD9 Camsap3-209ENSMUST00000207970 3817 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nup98Q6PFD9 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nup98Q6PFD9 Pigh-203ENSMUST00000217998 2868 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Nup98Q6PFD9 Lrp2bp-201ENSMUST00000066451 1525 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Nup98Q6PFD9 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nup98Q6PFD9 2300003K06Rik-201ENSMUST00000105054 1265 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Nup98Q6PFD9 Tnfrsf9-203ENSMUST00000105671 1278 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nup98Q6PFD9 Gm11475-201ENSMUST00000118482 476 ntBASIC13.29□□□□□ -0.28
Nup98Q6PFD9 Gm1826-201ENSMUST00000118646 1162 ntBASIC13.29□□□□□ -0.28
Nup98Q6PFD9 Gm12906-201ENSMUST00000154610 441 ntBASIC13.29□□□□□ -0.28
Nup98Q6PFD9 Mir99ahg-209ENSMUST00000182820 835 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Nup98Q6PFD9 Gm37723-201ENSMUST00000194480 565 ntBASIC13.29□□□□□ -0.28
Nup98Q6PFD9 Cenpx-201ENSMUST00000026137 692 ntTSL 2 BASIC13.29□□□□□ -0.28
Nup98Q6PFD9 Tnfrsf9-202ENSMUST00000060901 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nup98Q6PFD9 Dcpp2-201ENSMUST00000088598 611 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nup98Q6PFD9 Gm43482-201ENSMUST00000202797 1861 ntBASIC13.29□□□□□ -0.28
Nup98Q6PFD9 Leprot-201ENSMUST00000030254 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nup98Q6PFD9 Ubap2l-201ENSMUST00000029553 3509 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nup98Q6PFD9 Akt2-201ENSMUST00000051356 2923 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nup98Q6PFD9 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nup98Q6PFD9 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Nup98Q6PFD9 Clu-201ENSMUST00000022616 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nup98Q6PFD9 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nup98Q6PFD9 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nup98Q6PFD9 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nup98Q6PFD9 Gm26632-201ENSMUST00000181120 1400 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Nup98Q6PFD9 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nup98Q6PFD9 Wwp2-204ENSMUST00000212205 2758 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Nup98Q6PFD9 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nup98Q6PFD9 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC13.28□□□□□ -0.28
Nup98Q6PFD9 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC13.28□□□□□ -0.28
Nup98Q6PFD9 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nup98Q6PFD9 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nup98Q6PFD9 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nup98Q6PFD9 Pdcl-202ENSMUST00000112940 3056 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nup98Q6PFD9 Gm15136-201ENSMUST00000120552 533 ntBASIC13.28□□□□□ -0.28
Nup98Q6PFD9 Gm13027-201ENSMUST00000135858 241 ntTSL 5 BASIC13.28□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 43.5 ms