Protein–RNA interactions for Protein: Q6IRU2

Tpm4, Tropomyosin alpha-4 chain, mousemouse

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm4Q6IRU2 Ly75-201ENSMUST00000028362 5172 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.35
Tpm4Q6IRU2 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Tpm4Q6IRU2 Srsf6-203ENSMUST00000130411 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Tpm4Q6IRU2 Ubap2l-201ENSMUST00000029553 3509 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Tpm4Q6IRU2 Tnfsf13b-203ENSMUST00000207792 4771 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Tpm4Q6IRU2 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Tpm4Q6IRU2 C730027H18Rik-201ENSMUST00000218381 2300 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Tpm4Q6IRU2 Slc45a4-202ENSMUST00000076224 4240 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Tpm4Q6IRU2 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Tpm4Q6IRU2 Myh9-201ENSMUST00000016771 7433 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Tpm4Q6IRU2 Slc25a51-201ENSMUST00000107796 4433 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Tpm4Q6IRU2 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Tpm4Q6IRU2 Gm15004-201ENSMUST00000119192 630 ntBASIC12.83□□□□□ -0.36
Tpm4Q6IRU2 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Tpm4Q6IRU2 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Tpm4Q6IRU2 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC12.83□□□□□ -0.36
Tpm4Q6IRU2 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC12.83□□□□□ -0.36
Tpm4Q6IRU2 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC12.83□□□□□ -0.36
Tpm4Q6IRU2 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC12.83□□□□□ -0.36
Tpm4Q6IRU2 Gm38266-201ENSMUST00000194931 421 ntBASIC12.83□□□□□ -0.36
Tpm4Q6IRU2 Gm38314-201ENSMUST00000195709 625 ntBASIC12.83□□□□□ -0.36
Tpm4Q6IRU2 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Tpm4Q6IRU2 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Tpm4Q6IRU2 Arc-202ENSMUST00000110009 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Tpm4Q6IRU2 Arc-201ENSMUST00000023268 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Tpm4Q6IRU2 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Tpm4Q6IRU2 Sirt2-208ENSMUST00000155327 2117 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Tpm4Q6IRU2 Gm44755-201ENSMUST00000207830 2102 ntBASIC12.83□□□□□ -0.36
Tpm4Q6IRU2 Gm13135-201ENSMUST00000117628 3121 ntBASIC12.83□□□□□ -0.36
Tpm4Q6IRU2 Gm8862-201ENSMUST00000198379 1346 ntBASIC12.83□□□□□ -0.36
Tpm4Q6IRU2 Cdc42ep4-201ENSMUST00000053536 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Tpm4Q6IRU2 Pou2f1-202ENSMUST00000069609 2402 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Tpm4Q6IRU2 Gm45234-201ENSMUST00000129411 4359 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
Tpm4Q6IRU2 4933407I05Rik-204ENSMUST00000217562 1561 ntBASIC12.82□□□□□ -0.36
Tpm4Q6IRU2 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Tpm4Q6IRU2 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Tpm4Q6IRU2 Gm13392-201ENSMUST00000117708 150 ntBASIC12.82□□□□□ -0.36
Tpm4Q6IRU2 Srrm3os-201ENSMUST00000131896 1271 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Tpm4Q6IRU2 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Tpm4Q6IRU2 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC12.82□□□□□ -0.36
Tpm4Q6IRU2 Ighv4-2-201ENSMUST00000192975 362 ntBASIC12.82□□□□□ -0.36
Tpm4Q6IRU2 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Tpm4Q6IRU2 Gm6334-201ENSMUST00000207083 228 ntBASIC12.82□□□□□ -0.36
Tpm4Q6IRU2 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC12.82□□□□□ -0.36
Tpm4Q6IRU2 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC12.82□□□□□ -0.36
Tpm4Q6IRU2 Gm5705-201ENSMUST00000066241 711 ntBASIC12.82□□□□□ -0.36
Tpm4Q6IRU2 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Tpm4Q6IRU2 Kcns2-202ENSMUST00000228725 4906 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Tpm4Q6IRU2 Acin1-203ENSMUST00000111484 4048 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Tpm4Q6IRU2 Ldb2-204ENSMUST00000199256 2596 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Tpm4Q6IRU2 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Tpm4Q6IRU2 Zfp30-202ENSMUST00000122387 3342 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Tpm4Q6IRU2 Rbm8a-203ENSMUST00000198027 2757 ntTSL 3 BASIC12.82□□□□□ -0.36
Tpm4Q6IRU2 Slit2-202ENSMUST00000170109 7758 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Tpm4Q6IRU2 Slit2-217ENSMUST00000174421 7785 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Tpm4Q6IRU2 Tnpo3-201ENSMUST00000012679 4251 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Tpm4Q6IRU2 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC12.82□□□□□ -0.36
Tpm4Q6IRU2 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Tpm4Q6IRU2 Lin52-201ENSMUST00000137170 2270 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Tpm4Q6IRU2 Nectin4-201ENSMUST00000006578 3636 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Tpm4Q6IRU2 Fbxo43-201ENSMUST00000058643 4035 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Tpm4Q6IRU2 Ints10-201ENSMUST00000034328 4201 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Tpm4Q6IRU2 Slc9a8-202ENSMUST00000073873 4429 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Tpm4Q6IRU2 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Tpm4Q6IRU2 Usp2-203ENSMUST00000114830 2122 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Tpm4Q6IRU2 Flna-201ENSMUST00000033699 8312 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Tpm4Q6IRU2 Pou6f1-201ENSMUST00000058274 2523 ntTSL 2 BASIC12.82□□□□□ -0.36
Tpm4Q6IRU2 Btg2-201ENSMUST00000020692 2743 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Tpm4Q6IRU2 Tube1-201ENSMUST00000019991 2929 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Tpm4Q6IRU2 Sorbs1-203ENSMUST00000165212 2175 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Tpm4Q6IRU2 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tpm4Q6IRU2 Ttll10-206ENSMUST00000184348 2556 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Tpm4Q6IRU2 Pla2g4b-201ENSMUST00000126150 2790 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Tpm4Q6IRU2 Gm10829-201ENSMUST00000202084 2988 ntBASIC12.81□□□□□ -0.36
Tpm4Q6IRU2 4930431P19Rik-202ENSMUST00000207761 2959 ntBASIC12.81□□□□□ -0.36
Tpm4Q6IRU2 Lrtm2-204ENSMUST00000168793 3407 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Tpm4Q6IRU2 Gm37368-201ENSMUST00000193173 3212 ntBASIC12.81□□□□□ -0.36
Tpm4Q6IRU2 Mageb4-202ENSMUST00000113969 2403 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tpm4Q6IRU2 Ttll7-205ENSMUST00000170055 6075 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Tpm4Q6IRU2 Spem2-201ENSMUST00000056941 1640 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tpm4Q6IRU2 Khnyn-201ENSMUST00000022831 3898 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tpm4Q6IRU2 Bicral-201ENSMUST00000040624 6579 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tpm4Q6IRU2 Slc26a11-201ENSMUST00000050880 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tpm4Q6IRU2 Anxa6-201ENSMUST00000102727 2471 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Tpm4Q6IRU2 Slc6a5-202ENSMUST00000107605 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tpm4Q6IRU2 Myh13-201ENSMUST00000081911 5817 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Tpm4Q6IRU2 Slc6a12-205ENSMUST00000166457 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tpm4Q6IRU2 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Tpm4Q6IRU2 Ttc30b-201ENSMUST00000099996 2737 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Tpm4Q6IRU2 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tpm4Q6IRU2 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Tpm4Q6IRU2 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC12.81□□□□□ -0.36
Tpm4Q6IRU2 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC12.81□□□□□ -0.36
Tpm4Q6IRU2 Gm26047-201ENSMUST00000157308 113 ntBASIC12.81□□□□□ -0.36
Tpm4Q6IRU2 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC12.81□□□□□ -0.36
Tpm4Q6IRU2 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Tpm4Q6IRU2 Phf8-211ENSMUST00000168501 6359 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Tpm4Q6IRU2 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tpm4Q6IRU2 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC12.81□□□□□ -0.36
Tpm4Q6IRU2 Gm26047-202ENSMUST00000198840 115 ntBASIC12.81□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 43.5 ms