Protein–RNA interactions for Protein: Q6IRT3

Parpbp, PCNA-interacting partner, mousemouse

Predictions only

Length 573 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ParpbpQ6IRT3 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC10.82□□□□□ -0.68
ParpbpQ6IRT3 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
ParpbpQ6IRT3 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
ParpbpQ6IRT3 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
ParpbpQ6IRT3 Gm3836-201ENSMUST00000211377 1613 ntBASIC10.82□□□□□ -0.68
ParpbpQ6IRT3 LMLN2-201ENSMUST00000224691 2342 ntAPPRIS P5 BASIC10.82□□□□□ -0.68
ParpbpQ6IRT3 Kirrel2-201ENSMUST00000045817 3352 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
ParpbpQ6IRT3 Gpr161-201ENSMUST00000111450 6862 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
ParpbpQ6IRT3 Srrm4-201ENSMUST00000076124 7472 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
ParpbpQ6IRT3 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
ParpbpQ6IRT3 Anxa7-202ENSMUST00000100844 2904 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
ParpbpQ6IRT3 Gm15987-201ENSMUST00000141700 2231 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
ParpbpQ6IRT3 Fetub-204ENSMUST00000170805 1508 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
ParpbpQ6IRT3 Gm45234-201ENSMUST00000129411 4359 ntAPPRIS P1 TSL 2 BASIC10.82□□□□□ -0.68
ParpbpQ6IRT3 Gm43242-201ENSMUST00000199507 1776 ntBASIC10.82□□□□□ -0.68
ParpbpQ6IRT3 Plekhn1-202ENSMUST00000105571 2004 ntTSL 5 BASIC10.82□□□□□ -0.68
ParpbpQ6IRT3 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
ParpbpQ6IRT3 Capn15-201ENSMUST00000041641 3520 ntAPPRIS P3 TSL 5 BASIC10.81□□□□□ -0.68
ParpbpQ6IRT3 Nrd1-203ENSMUST00000106644 3784 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
ParpbpQ6IRT3 Gm5475-202ENSMUST00000148928 2320 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
ParpbpQ6IRT3 AC159308.2-201ENSMUST00000213592 2325 ntBASIC10.81□□□□□ -0.68
ParpbpQ6IRT3 Gm42427-201ENSMUST00000200473 5292 ntBASIC10.81□□□□□ -0.68
ParpbpQ6IRT3 Nup210-202ENSMUST00000113509 6893 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
ParpbpQ6IRT3 Slc46a2-201ENSMUST00000030081 2833 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
ParpbpQ6IRT3 Dck-201ENSMUST00000031311 3078 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
ParpbpQ6IRT3 Ttpa-201ENSMUST00000098244 3053 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
ParpbpQ6IRT3 Ptgir-202ENSMUST00000144408 3305 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
ParpbpQ6IRT3 Oplah-209ENSMUST00000171340 4085 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
ParpbpQ6IRT3 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
ParpbpQ6IRT3 Wac-216ENSMUST00000171486 1608 ntTSL 5 BASIC10.81□□□□□ -0.68
ParpbpQ6IRT3 Abi1-204ENSMUST00000114544 2790 ntAPPRIS ALT1 TSL 1 (best) BASIC10.81□□□□□ -0.68
ParpbpQ6IRT3 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
ParpbpQ6IRT3 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
ParpbpQ6IRT3 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
ParpbpQ6IRT3 Gm8566-201ENSMUST00000120174 465 ntBASIC10.81□□□□□ -0.68
ParpbpQ6IRT3 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
ParpbpQ6IRT3 Gm16275-201ENSMUST00000147774 712 ntTSL 3 BASIC10.81□□□□□ -0.68
ParpbpQ6IRT3 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
ParpbpQ6IRT3 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC10.81□□□□□ -0.68
ParpbpQ6IRT3 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
ParpbpQ6IRT3 H2-Q3-201ENSMUST00000172583 608 ntBASIC10.81□□□□□ -0.68
ParpbpQ6IRT3 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC10.81□□□□□ -0.68
ParpbpQ6IRT3 Mir3102-201ENSMUST00000175555 104 ntBASIC10.81□□□□□ -0.68
ParpbpQ6IRT3 Gm2453-202ENSMUST00000195508 568 ntTSL 3 BASIC10.81□□□□□ -0.68
ParpbpQ6IRT3 Gm42660-201ENSMUST00000197733 947 ntBASIC10.81□□□□□ -0.68
ParpbpQ6IRT3 Gm42682-201ENSMUST00000198349 1265 ntBASIC10.81□□□□□ -0.68
ParpbpQ6IRT3 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC10.81□□□□□ -0.68
ParpbpQ6IRT3 Gm7940-201ENSMUST00000218195 769 ntBASIC10.81□□□□□ -0.68
ParpbpQ6IRT3 AC151275.1-201ENSMUST00000224870 585 ntBASIC10.81□□□□□ -0.68
ParpbpQ6IRT3 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC10.81□□□□□ -0.68
ParpbpQ6IRT3 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
ParpbpQ6IRT3 Acsl4-201ENSMUST00000033634 5280 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
ParpbpQ6IRT3 Vmn2r-ps25-201ENSMUST00000202322 2321 ntBASIC10.81□□□□□ -0.68
ParpbpQ6IRT3 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
ParpbpQ6IRT3 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
ParpbpQ6IRT3 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
ParpbpQ6IRT3 Morf4l2-204ENSMUST00000113097 1825 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
ParpbpQ6IRT3 Telo2-202ENSMUST00000115181 3530 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
ParpbpQ6IRT3 Galnt10-201ENSMUST00000066987 4715 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
ParpbpQ6IRT3 Tbc1d14-210ENSMUST00000140607 4649 ntAPPRIS P3 TSL 5 BASIC10.81□□□□□ -0.68
ParpbpQ6IRT3 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
ParpbpQ6IRT3 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC10.81□□□□□ -0.68
ParpbpQ6IRT3 Dzip1l-201ENSMUST00000078367 3981 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
ParpbpQ6IRT3 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
ParpbpQ6IRT3 Fbxo39-201ENSMUST00000108504 1708 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
ParpbpQ6IRT3 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
ParpbpQ6IRT3 Anks1b-218ENSMUST00000182595 3715 ntTSL 5 BASIC10.81□□□□□ -0.68
ParpbpQ6IRT3 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
ParpbpQ6IRT3 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC10.81□□□□□ -0.68
ParpbpQ6IRT3 CT025681.1-201ENSMUST00000225453 1855 ntBASIC10.81□□□□□ -0.68
ParpbpQ6IRT3 Rnf214-208ENSMUST00000161187 2847 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
ParpbpQ6IRT3 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
ParpbpQ6IRT3 Adgre5-208ENSMUST00000166939 2980 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
ParpbpQ6IRT3 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
ParpbpQ6IRT3 Atg9b-201ENSMUST00000059401 3902 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
ParpbpQ6IRT3 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
ParpbpQ6IRT3 Ank3-204ENSMUST00000092432 5832 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
ParpbpQ6IRT3 Klhl29-202ENSMUST00000218384 2716 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
ParpbpQ6IRT3 Dtl-201ENSMUST00000027933 4212 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
ParpbpQ6IRT3 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
ParpbpQ6IRT3 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
ParpbpQ6IRT3 Tcn2-203ENSMUST00000109989 1949 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
ParpbpQ6IRT3 Gpr146-203ENSMUST00000100514 4264 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
ParpbpQ6IRT3 Zfp772-201ENSMUST00000074455 2777 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
ParpbpQ6IRT3 Rin1-201ENSMUST00000025818 4184 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
ParpbpQ6IRT3 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
ParpbpQ6IRT3 Psapl1-201ENSMUST00000052224 2548 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
ParpbpQ6IRT3 Pfkp-201ENSMUST00000021614 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
ParpbpQ6IRT3 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
ParpbpQ6IRT3 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
ParpbpQ6IRT3 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
ParpbpQ6IRT3 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC10.8□□□□□ -0.68
ParpbpQ6IRT3 Derl2-202ENSMUST00000108523 884 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
ParpbpQ6IRT3 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC10.8□□□□□ -0.68
ParpbpQ6IRT3 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
ParpbpQ6IRT3 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
ParpbpQ6IRT3 Gm37592-201ENSMUST00000192741 373 ntTSL 5 BASIC10.8□□□□□ -0.68
ParpbpQ6IRT3 Gm2965-201ENSMUST00000198365 343 ntBASIC10.8□□□□□ -0.68
ParpbpQ6IRT3 Gm43138-201ENSMUST00000199123 708 ntBASIC10.8□□□□□ -0.68
ParpbpQ6IRT3 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms