Protein–RNA interactions for Protein: Q61473

Sox17, Transcription factor SOX-17, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox17Q61473 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Sox17Q61473 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Sox17Q61473 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Sox17Q61473 Ranbp10-201ENSMUST00000041400 5308 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Sox17Q61473 Inf2-201ENSMUST00000101029 4001 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Sox17Q61473 Acin1-203ENSMUST00000111484 4048 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Sox17Q61473 Bace1-202ENSMUST00000078111 4041 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Sox17Q61473 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Sox17Q61473 Il10ra-202ENSMUST00000176222 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Sox17Q61473 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Sox17Q61473 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Sox17Q61473 Mcf2l-202ENSMUST00000098927 3215 ntTSL 5 BASIC10.72□□□□□ -0.69
Sox17Q61473 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Sox17Q61473 Btnl4-201ENSMUST00000065841 1761 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Sox17Q61473 Tpd52l2-202ENSMUST00000069712 1799 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Sox17Q61473 Kif2a-202ENSMUST00000117423 2023 ntTSL 5 BASIC10.72□□□□□ -0.69
Sox17Q61473 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Sox17Q61473 Gm15567-201ENSMUST00000148699 2130 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Sox17Q61473 Myh10-203ENSMUST00000102611 7791 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Sox17Q61473 Prkcd-201ENSMUST00000022521 2612 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Sox17Q61473 Trpm1-217ENSMUST00000206263 5493 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.69
Sox17Q61473 Mlc1-202ENSMUST00000109368 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Sox17Q61473 Themis2-201ENSMUST00000045154 3079 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Sox17Q61473 Mical1-203ENSMUST00000119962 3565 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.69
Sox17Q61473 Aak1-201ENSMUST00000003710 7203 ntAPPRIS P3 TSL 5 BASIC10.71□□□□□ -0.69
Sox17Q61473 Exoc7-202ENSMUST00000106411 3205 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
Sox17Q61473 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC10.71□□□□□ -0.69
Sox17Q61473 Fer1l4-201ENSMUST00000109611 6106 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
Sox17Q61473 Kir3dl2-202ENSMUST00000113108 1932 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Sox17Q61473 Gm14071-201ENSMUST00000117817 509 ntBASIC10.71□□□□□ -0.69
Sox17Q61473 Gm14660-201ENSMUST00000119809 575 ntBASIC10.71□□□□□ -0.69
Sox17Q61473 Arhgap33os-201ENSMUST00000124276 2648 ntTSL 2 BASIC10.71□□□□□ -0.69
Sox17Q61473 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Sox17Q61473 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC10.71□□□□□ -0.69
Sox17Q61473 Gm20498-203ENSMUST00000166664 2284 ntAPPRIS P1 TSL 2 BASIC10.71□□□□□ -0.69
Sox17Q61473 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Sox17Q61473 Bco1-203ENSMUST00000176860 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Sox17Q61473 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Sox17Q61473 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Sox17Q61473 Gnas-223ENSMUST00000185956 3729 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Sox17Q61473 Gnas-224ENSMUST00000186907 3729 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Sox17Q61473 Gm28774-201ENSMUST00000187087 1498 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Sox17Q61473 Gm9230-201ENSMUST00000188228 532 ntBASIC10.71□□□□□ -0.69
Sox17Q61473 Gm37165-201ENSMUST00000193815 1463 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Sox17Q61473 Atp6v0e2-202ENSMUST00000203011 1612 ntTSL 2 BASIC10.71□□□□□ -0.69
Sox17Q61473 Csnk1g1-214ENSMUST00000206594 2482 ntAPPRIS P2 TSL 5 BASIC10.71□□□□□ -0.69
Sox17Q61473 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Sox17Q61473 AC164092.1-201ENSMUST00000215635 2232 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Sox17Q61473 Rin1-208ENSMUST00000225427 4503 ntAPPRIS P2 BASIC10.71□□□□□ -0.69
Sox17Q61473 AC154528.2-201ENSMUST00000228432 3023 ntBASIC10.71□□□□□ -0.69
Sox17Q61473 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Sox17Q61473 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Sox17Q61473 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Sox17Q61473 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC10.71□□□□□ -0.69
Sox17Q61473 Elmod3-201ENSMUST00000070990 2122 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Sox17Q61473 Pygl-201ENSMUST00000071250 2825 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Sox17Q61473 Trim16-202ENSMUST00000072639 1929 ntTSL 2 BASIC10.71□□□□□ -0.69
Sox17Q61473 Apol9a-201ENSMUST00000081776 1475 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Sox17Q61473 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Sox17Q61473 Myo18a-222ENSMUST00000168348 6582 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.7
Sox17Q61473 Llgl1-202ENSMUST00000108719 4268 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.7
Sox17Q61473 Golm1-201ENSMUST00000022039 3954 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Sox17Q61473 Slc18a1-201ENSMUST00000037478 3115 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Sox17Q61473 Mtmr11-201ENSMUST00000054356 2778 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Sox17Q61473 Icam1-201ENSMUST00000086399 2535 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Sox17Q61473 4632427E13Rik-202ENSMUST00000147198 6559 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Sox17Q61473 Aktip-203ENSMUST00000120349 2153 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Sox17Q61473 Togaram1-201ENSMUST00000066296 6372 ntAPPRIS P2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Sox17Q61473 Stc2-201ENSMUST00000020546 3940 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Sox17Q61473 Brat1-203ENSMUST00000110806 3854 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Sox17Q61473 CT025681.1-201ENSMUST00000225453 1855 ntBASIC10.7□□□□□ -0.7
Sox17Q61473 BC049352-203ENSMUST00000171799 1714 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Sox17Q61473 Platr25-207ENSMUST00000222477 1705 ntTSL 5 BASIC10.7□□□□□ -0.7
Sox17Q61473 D2hgdh-201ENSMUST00000097633 3232 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
Sox17Q61473 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Sox17Q61473 Phf21a-209ENSMUST00000111297 6188 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
Sox17Q61473 Phf21a-201ENSMUST00000044036 6187 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
Sox17Q61473 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Sox17Q61473 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Sox17Q61473 Pnkd-202ENSMUST00000087225 2859 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Sox17Q61473 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC10.7□□□□□ -0.7
Sox17Q61473 AC171277.1-201ENSMUST00000216902 1441 ntBASIC10.7□□□□□ -0.7
Sox17Q61473 Tsc22d4-202ENSMUST00000100539 3983 ntAPPRIS P2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Sox17Q61473 Gprc5d-202ENSMUST00000111922 1317 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
Sox17Q61473 Gm6203-201ENSMUST00000209575 1342 ntBASIC10.7□□□□□ -0.7
Sox17Q61473 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Sox17Q61473 Gm23931-201ENSMUST00000103842 109 ntBASIC10.7□□□□□ -0.7
Sox17Q61473 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC10.7□□□□□ -0.7
Sox17Q61473 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Sox17Q61473 1700037C06Rik-201ENSMUST00000132824 874 ntBASIC10.7□□□□□ -0.7
Sox17Q61473 9130204K15Rik-202ENSMUST00000150312 696 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Sox17Q61473 Gm3329-201ENSMUST00000159873 556 ntBASIC10.7□□□□□ -0.7
Sox17Q61473 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC10.7□□□□□ -0.7
Sox17Q61473 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
Sox17Q61473 Gm34767-201ENSMUST00000191813 1062 ntBASIC10.7□□□□□ -0.7
Sox17Q61473 Gm43133-201ENSMUST00000197472 463 ntBASIC10.7□□□□□ -0.7
Sox17Q61473 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Sox17Q61473 Gm8956-201ENSMUST00000203939 825 ntBASIC10.7□□□□□ -0.7
Sox17Q61473 Gm6013-201ENSMUST00000212264 699 ntBASIC10.7□□□□□ -0.7
Sox17Q61473 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC10.7□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms