Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 Rwdd2a-202ENSMUST00000179212 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rc3h1Q4VGL6 Gm16740-201ENSMUST00000181819 956 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Rc3h1Q4VGL6 Gm8492-201ENSMUST00000182375 987 ntBASIC13.31□□□□□ -0.28
Rc3h1Q4VGL6 Eef1b2-209ENSMUST00000188524 681 ntTSL 3 BASIC13.31□□□□□ -0.28
Rc3h1Q4VGL6 Gm5100-201ENSMUST00000195631 589 ntBASIC13.31□□□□□ -0.28
Rc3h1Q4VGL6 Gm43163-201ENSMUST00000196571 442 ntBASIC13.31□□□□□ -0.28
Rc3h1Q4VGL6 Sox2ot-217ENSMUST00000200414 710 ntTSL 3 BASIC13.31□□□□□ -0.28
Rc3h1Q4VGL6 Gm18561-201ENSMUST00000206027 804 ntBASIC13.31□□□□□ -0.28
Rc3h1Q4VGL6 1700026F02Rik-203ENSMUST00000211950 1082 ntTSL 5 BASIC13.31□□□□□ -0.28
Rc3h1Q4VGL6 Gm19046-201ENSMUST00000221263 1298 ntBASIC13.31□□□□□ -0.28
Rc3h1Q4VGL6 Gm19009-201ENSMUST00000223072 823 ntBASIC13.31□□□□□ -0.28
Rc3h1Q4VGL6 Prrxl1-205ENSMUST00000228878 723 ntBASIC13.31□□□□□ -0.28
Rc3h1Q4VGL6 Smco2-201ENSMUST00000032433 1276 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rc3h1Q4VGL6 4933400A11Rik-201ENSMUST00000068874 1230 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rc3h1Q4VGL6 4933400A11Rik-202ENSMUST00000068894 1217 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rc3h1Q4VGL6 Ifitm2-201ENSMUST00000081649 655 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rc3h1Q4VGL6 Olfr61-201ENSMUST00000084455 936 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Rc3h1Q4VGL6 Gm10263-201ENSMUST00000085163 300 ntBASIC13.31□□□□□ -0.28
Rc3h1Q4VGL6 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Rc3h1Q4VGL6 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rc3h1Q4VGL6 Slc38a3-201ENSMUST00000010208 2585 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rc3h1Q4VGL6 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Rc3h1Q4VGL6 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Rc3h1Q4VGL6 Dmrtc1b-203ENSMUST00000118842 1321 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rc3h1Q4VGL6 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rc3h1Q4VGL6 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rc3h1Q4VGL6 Gm37859-201ENSMUST00000195529 2173 ntBASIC13.31□□□□□ -0.28
Rc3h1Q4VGL6 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rc3h1Q4VGL6 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rc3h1Q4VGL6 Nme1-203ENSMUST00000135884 3181 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rc3h1Q4VGL6 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rc3h1Q4VGL6 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rc3h1Q4VGL6 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rc3h1Q4VGL6 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Rc3h1Q4VGL6 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Rc3h1Q4VGL6 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rc3h1Q4VGL6 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Rc3h1Q4VGL6 Dck-201ENSMUST00000031311 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rc3h1Q4VGL6 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rc3h1Q4VGL6 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rc3h1Q4VGL6 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC13.3□□□□□ -0.28
Rc3h1Q4VGL6 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rc3h1Q4VGL6 Hist1h3d-201ENSMUST00000105105 1249 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Rc3h1Q4VGL6 Gm15528-201ENSMUST00000117821 864 ntBASIC13.3□□□□□ -0.28
Rc3h1Q4VGL6 Elobl-203ENSMUST00000121228 704 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
Rc3h1Q4VGL6 4933416E03Rik-201ENSMUST00000133091 1126 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Rc3h1Q4VGL6 Nudt6-207ENSMUST00000141438 899 ntTSL 2 BASIC13.3□□□□□ -0.28
Rc3h1Q4VGL6 2810403D21Rik-207ENSMUST00000152089 852 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Rc3h1Q4VGL6 Mir6407-201ENSMUST00000184510 101 ntBASIC13.3□□□□□ -0.28
Rc3h1Q4VGL6 Gm29187-201ENSMUST00000186681 689 ntTSL 3 BASIC13.3□□□□□ -0.28
Rc3h1Q4VGL6 1700041M19Rik-202ENSMUST00000190908 1123 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Rc3h1Q4VGL6 Gm38188-201ENSMUST00000192879 856 ntBASIC13.3□□□□□ -0.28
Rc3h1Q4VGL6 Gm44008-201ENSMUST00000204345 412 ntBASIC13.3□□□□□ -0.28
Rc3h1Q4VGL6 Gm30671-201ENSMUST00000214898 318 ntBASIC13.3□□□□□ -0.28
Rc3h1Q4VGL6 Acy1-209ENSMUST00000215395 1051 ntTSL 5 BASIC13.3□□□□□ -0.28
Rc3h1Q4VGL6 AC160028.1-201ENSMUST00000219645 1095 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Rc3h1Q4VGL6 CT010506.1-201ENSMUST00000223673 349 ntBASIC13.3□□□□□ -0.28
Rc3h1Q4VGL6 CT025602.2-201ENSMUST00000226553 772 ntBASIC13.3□□□□□ -0.28
Rc3h1Q4VGL6 AC136376.2-201ENSMUST00000228819 490 ntBASIC13.3□□□□□ -0.28
Rc3h1Q4VGL6 Ly6i-201ENSMUST00000023250 1156 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rc3h1Q4VGL6 Gm23680-201ENSMUST00000083162 164 ntBASIC13.3□□□□□ -0.28
Rc3h1Q4VGL6 Ccl21a-201ENSMUST00000095114 870 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rc3h1Q4VGL6 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Rc3h1Q4VGL6 Zfp773-201ENSMUST00000032622 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rc3h1Q4VGL6 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Rc3h1Q4VGL6 Acat1-201ENSMUST00000034547 3405 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rc3h1Q4VGL6 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rc3h1Q4VGL6 Ap1s2-203ENSMUST00000112294 3199 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Rc3h1Q4VGL6 Gm9544-201ENSMUST00000223349 2482 ntBASIC13.3□□□□□ -0.28
Rc3h1Q4VGL6 Arih1-202ENSMUST00000165322 1431 ntTSL 5 BASIC13.3□□□□□ -0.28
Rc3h1Q4VGL6 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rc3h1Q4VGL6 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rc3h1Q4VGL6 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rc3h1Q4VGL6 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rc3h1Q4VGL6 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Rc3h1Q4VGL6 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Rc3h1Q4VGL6 Rspo2-201ENSMUST00000063492 3338 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rc3h1Q4VGL6 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rc3h1Q4VGL6 S100a4-201ENSMUST00000001046 498 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rc3h1Q4VGL6 2610203C22Rik-201ENSMUST00000115480 1246 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Rc3h1Q4VGL6 Gm13791-201ENSMUST00000123263 608 ntTSL 3 BASIC13.29□□□□□ -0.28
Rc3h1Q4VGL6 Gm12798-201ENSMUST00000124786 666 ntTSL 5 BASIC13.29□□□□□ -0.28
Rc3h1Q4VGL6 Nr5a1os-201ENSMUST00000146954 926 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Rc3h1Q4VGL6 2810403D21Rik-206ENSMUST00000151166 1107 ntTSL 3 BASIC13.29□□□□□ -0.28
Rc3h1Q4VGL6 Snhg17-205ENSMUST00000151331 529 ntTSL 2 BASIC13.29□□□□□ -0.28
Rc3h1Q4VGL6 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC13.29□□□□□ -0.28
Rc3h1Q4VGL6 Park2-204ENSMUST00000179624 1108 ntTSL 5 BASIC13.29□□□□□ -0.28
Rc3h1Q4VGL6 Gm2449-201ENSMUST00000180676 585 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Rc3h1Q4VGL6 Gm29410-201ENSMUST00000188383 694 ntBASIC13.29□□□□□ -0.28
Rc3h1Q4VGL6 Gm42518-201ENSMUST00000196277 938 ntBASIC13.29□□□□□ -0.28
Rc3h1Q4VGL6 Fxyd4-202ENSMUST00000203066 522 ntTSL 3 BASIC13.29□□□□□ -0.28
Rc3h1Q4VGL6 Cdipt-202ENSMUST00000205830 805 ntTSL 2 BASIC13.29□□□□□ -0.28
Rc3h1Q4VGL6 Sdf2-201ENSMUST00000002133 1268 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rc3h1Q4VGL6 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rc3h1Q4VGL6 1600002K03Rik-201ENSMUST00000041882 678 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rc3h1Q4VGL6 Olfr1047-201ENSMUST00000099901 960 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Rc3h1Q4VGL6 Gadl1-202ENSMUST00000119291 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rc3h1Q4VGL6 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Rc3h1Q4VGL6 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rc3h1Q4VGL6 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms