Protein–RNA interactions for Protein: Q3USH1

Fam196a, Protein FAM196A, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam196aQ3USH1 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Fam196aQ3USH1 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC11.59□□□□□ -0.55
Fam196aQ3USH1 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Fam196aQ3USH1 Tfrc-201ENSMUST00000023486 4890 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Fam196aQ3USH1 Gm12912-201ENSMUST00000121596 1381 ntBASIC11.59□□□□□ -0.55
Fam196aQ3USH1 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC11.59□□□□□ -0.55
Fam196aQ3USH1 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC11.59□□□□□ -0.55
Fam196aQ3USH1 Gm11651-201ENSMUST00000130673 529 ntTSL 3 BASIC11.59□□□□□ -0.55
Fam196aQ3USH1 Gm26313-201ENSMUST00000157770 308 ntBASIC11.59□□□□□ -0.55
Fam196aQ3USH1 Gm22388-201ENSMUST00000158194 248 ntBASIC11.59□□□□□ -0.55
Fam196aQ3USH1 Gm21964-201ENSMUST00000178785 936 ntTSL 5 BASIC11.59□□□□□ -0.55
Fam196aQ3USH1 Plac9a-203ENSMUST00000183725 439 ntTSL 3 BASIC11.59□□□□□ -0.55
Fam196aQ3USH1 Plac9b-202ENSMUST00000183811 396 ntTSL 3 BASIC11.59□□□□□ -0.55
Fam196aQ3USH1 Gm37634-201ENSMUST00000195700 650 ntTSL 3 BASIC11.59□□□□□ -0.55
Fam196aQ3USH1 4930573C15Rik-201ENSMUST00000197707 777 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Fam196aQ3USH1 Mrpl23-207ENSMUST00000210803 590 ntTSL 3 BASIC11.59□□□□□ -0.55
Fam196aQ3USH1 AC134869.4-202ENSMUST00000224350 837 ntBASIC11.59□□□□□ -0.55
Fam196aQ3USH1 4933407L21Rik-201ENSMUST00000027426 1146 ntAPPRIS P5 TSL 1 (best) BASIC11.59□□□□□ -0.55
Fam196aQ3USH1 Ctrl-201ENSMUST00000034368 879 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Fam196aQ3USH1 Olfr985-201ENSMUST00000060345 1116 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Fam196aQ3USH1 4921508M14Rik-201ENSMUST00000061679 1099 ntBASIC11.59□□□□□ -0.55
Fam196aQ3USH1 Iqcf1-201ENSMUST00000085114 613 ntAPPRIS P4 TSL 1 (best) BASIC11.59□□□□□ -0.55
Fam196aQ3USH1 2310016G11Rik-201ENSMUST00000094460 992 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Fam196aQ3USH1 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Fam196aQ3USH1 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Fam196aQ3USH1 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Fam196aQ3USH1 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC11.59□□□□□ -0.55
Fam196aQ3USH1 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Fam196aQ3USH1 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Fam196aQ3USH1 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Fam196aQ3USH1 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC11.59□□□□□ -0.55
Fam196aQ3USH1 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Fam196aQ3USH1 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Fam196aQ3USH1 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Fam196aQ3USH1 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Fam196aQ3USH1 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Fam196aQ3USH1 Pax5-205ENSMUST00000107827 1315 ntTSL 5 BASIC11.59□□□□□ -0.55
Fam196aQ3USH1 1500004A13Rik-209ENSMUST00000185189 1659 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Fam196aQ3USH1 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Fam196aQ3USH1 Gm8038-201ENSMUST00000164674 2044 ntBASIC11.59□□□□□ -0.55
Fam196aQ3USH1 AC022682.1-201ENSMUST00000224624 2023 ntBASIC11.59□□□□□ -0.55
Fam196aQ3USH1 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.55
Fam196aQ3USH1 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC11.58□□□□□ -0.55
Fam196aQ3USH1 Klf3-202ENSMUST00000166409 1562 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
Fam196aQ3USH1 Rpl15-202ENSMUST00000080281 1922 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
Fam196aQ3USH1 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Fam196aQ3USH1 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Fam196aQ3USH1 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC11.58□□□□□ -0.56
Fam196aQ3USH1 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Fam196aQ3USH1 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Fam196aQ3USH1 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Fam196aQ3USH1 Gm45532-201ENSMUST00000210342 3620 ntBASIC11.58□□□□□ -0.56
Fam196aQ3USH1 Neu2-207ENSMUST00000172222 1715 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Fam196aQ3USH1 H2-M10.1-201ENSMUST00000025322 1394 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Fam196aQ3USH1 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Fam196aQ3USH1 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC11.58□□□□□ -0.56
Fam196aQ3USH1 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Fam196aQ3USH1 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Fam196aQ3USH1 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Fam196aQ3USH1 Gm8111-201ENSMUST00000117659 987 ntBASIC11.58□□□□□ -0.56
Fam196aQ3USH1 Gm15746-201ENSMUST00000120684 1027 ntBASIC11.58□□□□□ -0.56
Fam196aQ3USH1 Gm12052-201ENSMUST00000142151 933 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Fam196aQ3USH1 Gm15658-201ENSMUST00000148293 574 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Fam196aQ3USH1 Gm25872-201ENSMUST00000177784 100 ntBASIC11.58□□□□□ -0.56
Fam196aQ3USH1 1110036E04Rik-201ENSMUST00000181151 777 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Fam196aQ3USH1 Gm26716-201ENSMUST00000181227 415 ntTSL 5 BASIC11.58□□□□□ -0.56
Fam196aQ3USH1 Gm6114-201ENSMUST00000182472 968 ntBASIC11.58□□□□□ -0.56
Fam196aQ3USH1 Gm27440-201ENSMUST00000184785 107 ntBASIC11.58□□□□□ -0.56
Fam196aQ3USH1 1700088E04Rik-211ENSMUST00000190730 691 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Fam196aQ3USH1 1700013M08Rik-202ENSMUST00000200080 798 ntBASIC11.58□□□□□ -0.56
Fam196aQ3USH1 Nt5dc1-206ENSMUST00000213269 802 ntTSL 5 BASIC11.58□□□□□ -0.56
Fam196aQ3USH1 Tmod3-205ENSMUST00000215821 898 ntTSL 3 BASIC11.58□□□□□ -0.56
Fam196aQ3USH1 Gm9102-201ENSMUST00000219250 465 ntBASIC11.58□□□□□ -0.56
Fam196aQ3USH1 Ppm1a-205ENSMUST00000222896 1103 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Fam196aQ3USH1 Gm26782-203ENSMUST00000227103 751 ntBASIC11.58□□□□□ -0.56
Fam196aQ3USH1 Olfr71-201ENSMUST00000055401 939 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Fam196aQ3USH1 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Fam196aQ3USH1 Col15a1-203ENSMUST00000107730 1755 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Fam196aQ3USH1 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Fam196aQ3USH1 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Fam196aQ3USH1 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Fam196aQ3USH1 Hmox1-201ENSMUST00000005548 1569 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Fam196aQ3USH1 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Fam196aQ3USH1 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Fam196aQ3USH1 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Fam196aQ3USH1 Ppp2r2cos-201ENSMUST00000152862 1491 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Fam196aQ3USH1 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Fam196aQ3USH1 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Fam196aQ3USH1 Olfr541-203ENSMUST00000210357 1642 ntAPPRIS P1 TSL 2 BASIC11.57□□□□□ -0.56
Fam196aQ3USH1 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC11.57□□□□□ -0.56
Fam196aQ3USH1 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Fam196aQ3USH1 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Fam196aQ3USH1 Slc9a3-204ENSMUST00000225423 2589 ntAPPRIS ALT2 BASIC11.57□□□□□ -0.56
Fam196aQ3USH1 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Fam196aQ3USH1 Nrf1-220ENSMUST00000170535 1527 ntTSL 5 BASIC11.57□□□□□ -0.56
Fam196aQ3USH1 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Fam196aQ3USH1 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC11.57□□□□□ -0.56
Fam196aQ3USH1 Gm12470-201ENSMUST00000117239 1049 ntBASIC11.57□□□□□ -0.56
Fam196aQ3USH1 Gm15528-201ENSMUST00000117821 864 ntBASIC11.57□□□□□ -0.56
Fam196aQ3USH1 Gm8302-201ENSMUST00000119217 852 ntBASIC11.57□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 80.5 ms