Protein–RNA interactions for Protein: Q3UJB0

Sf3b2, Splicing factor 3b, subunit 2, mousemouse

Known RBP Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b2Q3UJB0 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Sf3b2Q3UJB0 4933425D22Rik-201ENSMUST00000201035 1721 ntBASIC14.86□□□□□ -0.03
Sf3b2Q3UJB0 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Sf3b2Q3UJB0 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Sf3b2Q3UJB0 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Sf3b2Q3UJB0 Etv1-204ENSMUST00000160701 1578 ntTSL 5 BASIC14.85□□□□□ -0.03
Sf3b2Q3UJB0 Znrf3-203ENSMUST00000172492 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sf3b2Q3UJB0 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sf3b2Q3UJB0 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sf3b2Q3UJB0 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sf3b2Q3UJB0 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sf3b2Q3UJB0 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Sf3b2Q3UJB0 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sf3b2Q3UJB0 Axl-201ENSMUST00000002677 4265 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sf3b2Q3UJB0 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Sf3b2Q3UJB0 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sf3b2Q3UJB0 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sf3b2Q3UJB0 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Sf3b2Q3UJB0 Gm24933-201ENSMUST00000103762 110 ntBASIC14.85□□□□□ -0.03
Sf3b2Q3UJB0 Gm23252-201ENSMUST00000103776 110 ntBASIC14.85□□□□□ -0.03
Sf3b2Q3UJB0 Trub2-203ENSMUST00000113807 1035 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Sf3b2Q3UJB0 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sf3b2Q3UJB0 Gsta3-202ENSMUST00000121676 894 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Sf3b2Q3UJB0 Gm15498-201ENSMUST00000126693 723 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Sf3b2Q3UJB0 E130307A14Rik-204ENSMUST00000139356 701 ntTSL 3 BASIC14.85□□□□□ -0.03
Sf3b2Q3UJB0 Gm13412-201ENSMUST00000150621 677 ntTSL 3 BASIC14.85□□□□□ -0.03
Sf3b2Q3UJB0 U2af1l4-218ENSMUST00000166960 747 ntTSL 3 BASIC14.85□□□□□ -0.03
Sf3b2Q3UJB0 Gm26443-201ENSMUST00000179610 110 ntBASIC14.85□□□□□ -0.03
Sf3b2Q3UJB0 9530085P06Rik-201ENSMUST00000182121 827 ntBASIC14.85□□□□□ -0.03
Sf3b2Q3UJB0 Kif4-ps-202ENSMUST00000185083 652 ntBASIC14.85□□□□□ -0.03
Sf3b2Q3UJB0 Gm19918-201ENSMUST00000194858 400 ntBASIC14.85□□□□□ -0.03
Sf3b2Q3UJB0 Ghrl-204ENSMUST00000203770 891 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sf3b2Q3UJB0 Ghrl-205ENSMUST00000204163 447 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sf3b2Q3UJB0 Gm29918-201ENSMUST00000205635 138 ntTSL 5 BASIC14.85□□□□□ -0.03
Sf3b2Q3UJB0 Ywhaq-ps1-201ENSMUST00000206623 710 ntBASIC14.85□□□□□ -0.03
Sf3b2Q3UJB0 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC14.85□□□□□ -0.03
Sf3b2Q3UJB0 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sf3b2Q3UJB0 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sf3b2Q3UJB0 Olfr582-202ENSMUST00000210119 1787 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Sf3b2Q3UJB0 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sf3b2Q3UJB0 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC14.85□□□□□ -0.03
Sf3b2Q3UJB0 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC14.84□□□□□ -0.03
Sf3b2Q3UJB0 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Sf3b2Q3UJB0 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Sf3b2Q3UJB0 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC14.84□□□□□ -0.03
Sf3b2Q3UJB0 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sf3b2Q3UJB0 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
Sf3b2Q3UJB0 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sf3b2Q3UJB0 Gadl1-202ENSMUST00000119291 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sf3b2Q3UJB0 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Sf3b2Q3UJB0 Gm43417-201ENSMUST00000201586 5207 ntBASIC14.84□□□□□ -0.03
Sf3b2Q3UJB0 Prex1-202ENSMUST00000099080 5818 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Sf3b2Q3UJB0 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC14.84□□□□□ -0.03
Sf3b2Q3UJB0 Rplp0-ps1-201ENSMUST00000122125 933 ntBASIC14.84□□□□□ -0.03
Sf3b2Q3UJB0 Gm12946-201ENSMUST00000122969 519 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Sf3b2Q3UJB0 Gm27191-201ENSMUST00000145973 448 ntTSL 3 BASIC14.84□□□□□ -0.03
Sf3b2Q3UJB0 Gm16547-201ENSMUST00000159474 293 ntBASIC14.84□□□□□ -0.03
Sf3b2Q3UJB0 Gm4705-201ENSMUST00000177415 354 ntBASIC14.84□□□□□ -0.03
Sf3b2Q3UJB0 Gm28415-201ENSMUST00000187528 452 ntTSL 2 BASIC14.84□□□□□ -0.03
Sf3b2Q3UJB0 1700084F23Rik-202ENSMUST00000188461 747 ntTSL 3 BASIC14.84□□□□□ -0.03
Sf3b2Q3UJB0 Gm2474-201ENSMUST00000195162 559 ntBASIC14.84□□□□□ -0.03
Sf3b2Q3UJB0 6720482G16Rik-201ENSMUST00000199552 1192 ntBASIC14.84□□□□□ -0.03
Sf3b2Q3UJB0 AC134601.2-201ENSMUST00000221071 130 ntBASIC14.84□□□□□ -0.03
Sf3b2Q3UJB0 Hbb-y-201ENSMUST00000033229 633 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sf3b2Q3UJB0 Ccdc30-203ENSMUST00000084307 989 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Sf3b2Q3UJB0 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sf3b2Q3UJB0 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sf3b2Q3UJB0 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sf3b2Q3UJB0 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Sf3b2Q3UJB0 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sf3b2Q3UJB0 Mkrn1-ps1-201ENSMUST00000122035 1390 ntBASIC14.84□□□□□ -0.03
Sf3b2Q3UJB0 Gm19863-201ENSMUST00000192480 2218 ntBASIC14.84□□□□□ -0.03
Sf3b2Q3UJB0 Eif2c5-201ENSMUST00000125609 1416 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Sf3b2Q3UJB0 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Sf3b2Q3UJB0 Arntl2-202ENSMUST00000111636 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Sf3b2Q3UJB0 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.03
Sf3b2Q3UJB0 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Sf3b2Q3UJB0 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Sf3b2Q3UJB0 Brcc3-203ENSMUST00000118428 2093 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.03
Sf3b2Q3UJB0 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Sf3b2Q3UJB0 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Sf3b2Q3UJB0 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC14.83□□□□□ -0.04
Sf3b2Q3UJB0 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC14.83□□□□□ -0.04
Sf3b2Q3UJB0 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Sf3b2Q3UJB0 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC14.83□□□□□ -0.04
Sf3b2Q3UJB0 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Sf3b2Q3UJB0 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Sf3b2Q3UJB0 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Sf3b2Q3UJB0 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Sf3b2Q3UJB0 Bcl2l11-204ENSMUST00000103211 672 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
Sf3b2Q3UJB0 Gm14071-201ENSMUST00000117817 509 ntBASIC14.83□□□□□ -0.04
Sf3b2Q3UJB0 Gm16209-201ENSMUST00000118457 627 ntBASIC14.83□□□□□ -0.04
Sf3b2Q3UJB0 Gm10171-201ENSMUST00000126220 628 ntBASIC14.83□□□□□ -0.04
Sf3b2Q3UJB0 Gm16341-201ENSMUST00000126385 377 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Sf3b2Q3UJB0 Gm16228-201ENSMUST00000162286 809 ntBASIC14.83□□□□□ -0.04
Sf3b2Q3UJB0 Tex33-202ENSMUST00000165170 1072 ntAPPRIS P4 TSL 1 (best) BASIC14.83□□□□□ -0.04
Sf3b2Q3UJB0 Gm3298-202ENSMUST00000172110 615 ntTSL 5 BASIC14.83□□□□□ -0.04
Sf3b2Q3UJB0 Gstt3-203ENSMUST00000173537 687 ntTSL 3 BASIC14.83□□□□□ -0.04
Sf3b2Q3UJB0 Gm5190-201ENSMUST00000192434 357 ntBASIC14.83□□□□□ -0.04
Sf3b2Q3UJB0 Rhoc-205ENSMUST00000196817 877 ntAPPRIS P1 TSL 3 BASIC14.83□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 109.1 ms