Protein–RNA interactions for Protein: Q3U4B1

Ssbp4, Single stranded DNA binding protein 4, isoform CRA_b, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssbp4Q3U4B1 Timm10b-210ENSMUST00000209588 373 ntTSL 3 BASIC9.69□□□□□ -0.86
Ssbp4Q3U4B1 Gm45285-201ENSMUST00000210418 749 ntTSL 3 BASIC9.69□□□□□ -0.86
Ssbp4Q3U4B1 Sdf2-201ENSMUST00000002133 1268 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Ssbp4Q3U4B1 Gm46336-201ENSMUST00000221894 279 ntTSL 5 BASIC9.69□□□□□ -0.86
Ssbp4Q3U4B1 Gm36423-202ENSMUST00000222215 1298 ntTSL 5 BASIC9.69□□□□□ -0.86
Ssbp4Q3U4B1 AC132901.1-201ENSMUST00000224345 508 ntBASIC9.69□□□□□ -0.86
Ssbp4Q3U4B1 CT009536.2-201ENSMUST00000225370 665 ntBASIC9.69□□□□□ -0.86
Ssbp4Q3U4B1 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC9.69□□□□□ -0.86
Ssbp4Q3U4B1 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Ssbp4Q3U4B1 BC030499-201ENSMUST00000046361 959 ntAPPRIS P1 TSL 5 BASIC9.69□□□□□ -0.86
Ssbp4Q3U4B1 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC9.69□□□□□ -0.86
Ssbp4Q3U4B1 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Ssbp4Q3U4B1 Gm23680-201ENSMUST00000083162 164 ntBASIC9.69□□□□□ -0.86
Ssbp4Q3U4B1 Lce1e-201ENSMUST00000090867 711 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Ssbp4Q3U4B1 Syt11-203ENSMUST00000107505 5020 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Ssbp4Q3U4B1 Maml3-202ENSMUST00000121440 8288 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Ssbp4Q3U4B1 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Ssbp4Q3U4B1 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Ssbp4Q3U4B1 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Ssbp4Q3U4B1 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Ssbp4Q3U4B1 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Ssbp4Q3U4B1 Brd4-202ENSMUST00000114475 2731 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Ssbp4Q3U4B1 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC9.69□□□□□ -0.86
Ssbp4Q3U4B1 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC9.69□□□□□ -0.86
Ssbp4Q3U4B1 Ppip5k1-205ENSMUST00000110628 5404 ntAPPRIS ALT2 TSL 5 BASIC9.69□□□□□ -0.86
Ssbp4Q3U4B1 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Ssbp4Q3U4B1 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC9.69□□□□□ -0.86
Ssbp4Q3U4B1 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Ssbp4Q3U4B1 B4galt4-201ENSMUST00000023482 2304 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Ssbp4Q3U4B1 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Ssbp4Q3U4B1 Eml5-201ENSMUST00000065716 9482 ntTSL 5 BASIC9.68□□□□□ -0.86
Ssbp4Q3U4B1 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Ssbp4Q3U4B1 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Ssbp4Q3U4B1 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Ssbp4Q3U4B1 Aldh3a1-202ENSMUST00000108716 1721 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Ssbp4Q3U4B1 Otx2-202ENSMUST00000119070 1708 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Ssbp4Q3U4B1 Ankrd53-201ENSMUST00000014891 1739 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Ssbp4Q3U4B1 Pafah1b2-201ENSMUST00000172450 6873 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Ssbp4Q3U4B1 AC156031.2-201ENSMUST00000213107 3310 ntBASIC9.68□□□□□ -0.86
Ssbp4Q3U4B1 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Ssbp4Q3U4B1 Snhg17-203ENSMUST00000141809 1553 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Ssbp4Q3U4B1 Ddx11-205ENSMUST00000224497 4141 ntAPPRIS ALT2 BASIC9.68□□□□□ -0.86
Ssbp4Q3U4B1 1700025G04Rik-201ENSMUST00000044581 9559 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Ssbp4Q3U4B1 Fut4-201ENSMUST00000061498 4074 ntAPPRIS P1 BASIC9.68□□□□□ -0.86
Ssbp4Q3U4B1 Gm6655-201ENSMUST00000201932 1309 ntBASIC9.68□□□□□ -0.86
Ssbp4Q3U4B1 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC9.68□□□□□ -0.86
Ssbp4Q3U4B1 A230006K03Rik-201ENSMUST00000107533 977 ntTSL 5 BASIC9.68□□□□□ -0.86
Ssbp4Q3U4B1 Gm16219-201ENSMUST00000120096 274 ntBASIC9.68□□□□□ -0.86
Ssbp4Q3U4B1 Gm15329-201ENSMUST00000121408 155 ntBASIC9.68□□□□□ -0.86
Ssbp4Q3U4B1 Gm15549-201ENSMUST00000121595 622 ntBASIC9.68□□□□□ -0.86
Ssbp4Q3U4B1 Mrpl20-202ENSMUST00000130188 442 ntTSL 3 BASIC9.68□□□□□ -0.86
Ssbp4Q3U4B1 Gm11651-201ENSMUST00000130673 529 ntTSL 3 BASIC9.68□□□□□ -0.86
Ssbp4Q3U4B1 Gm21972-201ENSMUST00000135197 776 ntAPPRIS P1 TSL 3 BASIC9.68□□□□□ -0.86
Ssbp4Q3U4B1 Gm11457-203ENSMUST00000146846 676 ntTSL 3 BASIC9.68□□□□□ -0.86
Ssbp4Q3U4B1 Agtpbp1-219ENSMUST00000170378 653 ntTSL 3 BASIC9.68□□□□□ -0.86
Ssbp4Q3U4B1 Gm23153-201ENSMUST00000175323 313 ntBASIC9.68□□□□□ -0.86
Ssbp4Q3U4B1 1700025F24Rik-201ENSMUST00000185238 894 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Ssbp4Q3U4B1 Gm29237-201ENSMUST00000186216 448 ntTSL 5 BASIC9.68□□□□□ -0.86
Ssbp4Q3U4B1 Pdcd5-ps-201ENSMUST00000191699 381 ntBASIC9.68□□□□□ -0.86
Ssbp4Q3U4B1 Gm37284-201ENSMUST00000193607 539 ntBASIC9.68□□□□□ -0.86
Ssbp4Q3U4B1 4930477O15Rik-201ENSMUST00000196484 1089 ntBASIC9.68□□□□□ -0.86
Ssbp4Q3U4B1 Fxyd4-202ENSMUST00000203066 522 ntTSL 3 BASIC9.68□□□□□ -0.86
Ssbp4Q3U4B1 Gm44593-201ENSMUST00000208372 1249 ntTSL 5 BASIC9.68□□□□□ -0.86
Ssbp4Q3U4B1 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Ssbp4Q3U4B1 Gm35625-201ENSMUST00000210416 316 ntTSL 3 BASIC9.68□□□□□ -0.86
Ssbp4Q3U4B1 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC9.68□□□□□ -0.86
Ssbp4Q3U4B1 1110019B22Rik-202ENSMUST00000218396 989 ntTSL 5 BASIC9.68□□□□□ -0.86
Ssbp4Q3U4B1 Cinp-204ENSMUST00000221102 536 ntTSL 2 BASIC9.68□□□□□ -0.86
Ssbp4Q3U4B1 Gm19009-201ENSMUST00000223072 823 ntBASIC9.68□□□□□ -0.86
Ssbp4Q3U4B1 Krtap19-5-201ENSMUST00000053460 483 ntAPPRIS P1 BASIC9.68□□□□□ -0.86
Ssbp4Q3U4B1 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Ssbp4Q3U4B1 1810009A15Rik-201ENSMUST00000096251 806 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Ssbp4Q3U4B1 Pigm-201ENSMUST00000052455 7554 ntAPPRIS P1 BASIC9.68□□□□□ -0.86
Ssbp4Q3U4B1 Fip1l1-204ENSMUST00000113536 4769 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Ssbp4Q3U4B1 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC9.68□□□□□ -0.86
Ssbp4Q3U4B1 Lvrn-201ENSMUST00000025358 3219 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
Ssbp4Q3U4B1 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Ssbp4Q3U4B1 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Ssbp4Q3U4B1 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC9.68□□□□□ -0.86
Ssbp4Q3U4B1 Psd4-201ENSMUST00000056641 4748 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Ssbp4Q3U4B1 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Ssbp4Q3U4B1 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Ssbp4Q3U4B1 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Ssbp4Q3U4B1 Pacsin1-201ENSMUST00000045896 4190 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Ssbp4Q3U4B1 Pisd-203ENSMUST00000120591 2491 ntAPPRIS ALT2 TSL 5 BASIC9.67□□□□□ -0.86
Ssbp4Q3U4B1 Cic-212ENSMUST00000169266 8221 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Ssbp4Q3U4B1 Gm37600-201ENSMUST00000193764 3292 ntBASIC9.67□□□□□ -0.86
Ssbp4Q3U4B1 Btbd9-201ENSMUST00000079924 6657 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Ssbp4Q3U4B1 Jmjd4-202ENSMUST00000108777 4351 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Ssbp4Q3U4B1 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC9.67□□□□□ -0.86
Ssbp4Q3U4B1 Gm44190-201ENSMUST00000205083 1401 ntBASIC9.67□□□□□ -0.86
Ssbp4Q3U4B1 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC9.67□□□□□ -0.86
Ssbp4Q3U4B1 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Ssbp4Q3U4B1 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC9.67□□□□□ -0.86
Ssbp4Q3U4B1 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC9.67□□□□□ -0.86
Ssbp4Q3U4B1 Map7d2-202ENSMUST00000112470 1350 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Ssbp4Q3U4B1 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Ssbp4Q3U4B1 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC9.67□□□□□ -0.86
Ssbp4Q3U4B1 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC9.67□□□□□ -0.86
Ssbp4Q3U4B1 Myo3b-202ENSMUST00000112241 1319 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 53.6 ms