Protein–RNA interactions for Protein: Q01853

Vcp, Transitional endoplasmic reticulum ATPase, mousemouse

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcpQ01853 Mrps17-204ENSMUST00000119604 1208 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
VcpQ01853 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
VcpQ01853 Gm28037-201ENSMUST00000122365 611 ntTSL 3 BASIC12.3□□□□□ -0.44
VcpQ01853 Gm15507-201ENSMUST00000133523 592 ntTSL 5 BASIC12.3□□□□□ -0.44
VcpQ01853 Gm18159-201ENSMUST00000174516 1070 ntBASIC12.3□□□□□ -0.44
VcpQ01853 Rpain-201ENSMUST00000018593 1100 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
VcpQ01853 Shisa5-205ENSMUST00000197099 742 ntTSL 3 BASIC12.3□□□□□ -0.44
VcpQ01853 Gm9645-201ENSMUST00000197131 792 ntBASIC12.3□□□□□ -0.44
VcpQ01853 Gm8956-201ENSMUST00000203939 825 ntBASIC12.3□□□□□ -0.44
VcpQ01853 Gm18463-201ENSMUST00000207258 474 ntBASIC12.3□□□□□ -0.44
VcpQ01853 Fcer2a-206ENSMUST00000208438 930 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
VcpQ01853 Fcer2a-208ENSMUST00000208603 930 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
VcpQ01853 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC12.3□□□□□ -0.44
VcpQ01853 Eny2-204ENSMUST00000226827 558 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
VcpQ01853 Olfr284-201ENSMUST00000063289 918 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
VcpQ01853 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC12.3□□□□□ -0.44
VcpQ01853 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC12.3□□□□□ -0.44
VcpQ01853 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
VcpQ01853 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC12.3□□□□□ -0.44
VcpQ01853 Stim1-209ENSMUST00000211457 2183 ntTSL 5 BASIC12.3□□□□□ -0.44
VcpQ01853 Myo18b-201ENSMUST00000086617 8280 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
VcpQ01853 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
VcpQ01853 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC12.3□□□□□ -0.44
VcpQ01853 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
VcpQ01853 Cfap161-201ENSMUST00000011298 1335 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
VcpQ01853 Serinc4-202ENSMUST00000110613 2240 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
VcpQ01853 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
VcpQ01853 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
VcpQ01853 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
VcpQ01853 Slc39a6-201ENSMUST00000070726 3882 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
VcpQ01853 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC12.3□□□□□ -0.44
VcpQ01853 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
VcpQ01853 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
VcpQ01853 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
VcpQ01853 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
VcpQ01853 Gm3836-201ENSMUST00000211377 1613 ntBASIC12.29□□□□□ -0.44
VcpQ01853 F10-205ENSMUST00000152034 1449 ntTSL 5 BASIC12.29□□□□□ -0.44
VcpQ01853 Samd11-201ENSMUST00000179919 2610 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
VcpQ01853 Ces2a-201ENSMUST00000034346 1960 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
VcpQ01853 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
VcpQ01853 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
VcpQ01853 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
VcpQ01853 Gm26286-201ENSMUST00000104166 134 ntBASIC12.29□□□□□ -0.44
VcpQ01853 Krtap4-16-201ENSMUST00000107437 954 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
VcpQ01853 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
VcpQ01853 Gm11949-201ENSMUST00000117640 372 ntBASIC12.29□□□□□ -0.44
VcpQ01853 Gm13549-201ENSMUST00000118339 796 ntBASIC12.29□□□□□ -0.44
VcpQ01853 Gm14724-201ENSMUST00000118400 537 ntBASIC12.29□□□□□ -0.44
VcpQ01853 4930502E09Rik-201ENSMUST00000126016 755 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
VcpQ01853 Gm25604-201ENSMUST00000158359 133 ntBASIC12.29□□□□□ -0.44
VcpQ01853 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC12.29□□□□□ -0.44
VcpQ01853 A430105J06Rik-201ENSMUST00000180869 1275 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
VcpQ01853 Mir8115-201ENSMUST00000184992 119 ntBASIC12.29□□□□□ -0.44
VcpQ01853 Gm2965-201ENSMUST00000198365 343 ntBASIC12.29□□□□□ -0.44
VcpQ01853 6430531B16Rik-204ENSMUST00000209335 898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
VcpQ01853 Gm18204-201ENSMUST00000209835 793 ntBASIC12.29□□□□□ -0.44
VcpQ01853 Gm2875-201ENSMUST00000211333 360 ntBASIC12.29□□□□□ -0.44
VcpQ01853 AC027700.1-201ENSMUST00000213965 370 ntTSL 5 BASIC12.29□□□□□ -0.44
VcpQ01853 Gm19009-201ENSMUST00000223072 823 ntBASIC12.29□□□□□ -0.44
VcpQ01853 1700029P11Rik-201ENSMUST00000074608 1024 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
VcpQ01853 Tmem220-202ENSMUST00000079077 1147 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
VcpQ01853 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
VcpQ01853 Mindy1-201ENSMUST00000039537 2800 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
VcpQ01853 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
VcpQ01853 Gm8146-201ENSMUST00000192106 1847 ntBASIC12.29□□□□□ -0.44
VcpQ01853 Gm10152-201ENSMUST00000193475 1344 ntBASIC12.29□□□□□ -0.44
VcpQ01853 Gm42941-201ENSMUST00000200347 1321 ntBASIC12.29□□□□□ -0.44
VcpQ01853 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC12.29□□□□□ -0.44
VcpQ01853 Nrd1-203ENSMUST00000106644 3784 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
VcpQ01853 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC12.29□□□□□ -0.44
VcpQ01853 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
VcpQ01853 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC12.29□□□□□ -0.44
VcpQ01853 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
VcpQ01853 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
VcpQ01853 Adamts10-201ENSMUST00000087623 4043 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
VcpQ01853 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
VcpQ01853 Brwd1-204ENSMUST00000113829 9843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
VcpQ01853 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
VcpQ01853 Gtf2ird1-203ENSMUST00000100650 3487 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
VcpQ01853 Ube2q2-203ENSMUST00000122441 2081 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
VcpQ01853 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC12.28□□□□□ -0.44
VcpQ01853 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
VcpQ01853 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
VcpQ01853 Leprot-201ENSMUST00000030254 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
VcpQ01853 Cxcr5-202ENSMUST00000179828 2824 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
VcpQ01853 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
VcpQ01853 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
VcpQ01853 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
VcpQ01853 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
VcpQ01853 Cdc42se1-203ENSMUST00000107200 637 ntTSL 3 BASIC12.28□□□□□ -0.44
VcpQ01853 Gm11511-201ENSMUST00000118146 540 ntBASIC12.28□□□□□ -0.44
VcpQ01853 Gm13022-201ENSMUST00000121181 285 ntBASIC12.28□□□□□ -0.44
VcpQ01853 Igf1-205ENSMUST00000121952 798 ntTSL 3 BASIC12.28□□□□□ -0.44
VcpQ01853 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
VcpQ01853 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC12.28□□□□□ -0.44
VcpQ01853 2010001M07Rik-201ENSMUST00000214235 364 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
VcpQ01853 1700011B04Rik-204ENSMUST00000220859 422 ntTSL 5 BASIC12.28□□□□□ -0.44
VcpQ01853 Psmg2-201ENSMUST00000025418 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
VcpQ01853 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
VcpQ01853 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 52 ms