Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Col8a1Q00780 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Col8a1Q00780 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Col8a1Q00780 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC9.86□□□□□ -0.83
Col8a1Q00780 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Col8a1Q00780 Tyk2-203ENSMUST00000214454 4770 ntAPPRIS ALT2 TSL 1 (best) BASIC9.86□□□□□ -0.83
Col8a1Q00780 Als2cl-201ENSMUST00000084926 5079 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Col8a1Q00780 Gm23255-201ENSMUST00000102244 110 ntBASIC9.86□□□□□ -0.83
Col8a1Q00780 Ighv7-1-201ENSMUST00000103474 363 ntAPPRIS P1 BASIC9.86□□□□□ -0.83
Col8a1Q00780 Gm25053-201ENSMUST00000103982 133 ntBASIC9.86□□□□□ -0.83
Col8a1Q00780 Gm25922-201ENSMUST00000104281 130 ntBASIC9.86□□□□□ -0.83
Col8a1Q00780 Gng5-ps-201ENSMUST00000120931 205 ntBASIC9.86□□□□□ -0.83
Col8a1Q00780 Gm13445-201ENSMUST00000121664 307 ntBASIC9.86□□□□□ -0.83
Col8a1Q00780 Gm13954-201ENSMUST00000123441 543 ntTSL 3 BASIC9.86□□□□□ -0.83
Col8a1Q00780 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Col8a1Q00780 Gm14266-202ENSMUST00000146542 1067 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Col8a1Q00780 Gzmc-201ENSMUST00000015585 894 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Col8a1Q00780 Gm24679-201ENSMUST00000158762 111 ntBASIC9.86□□□□□ -0.83
Col8a1Q00780 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC9.86□□□□□ -0.83
Col8a1Q00780 Gm20400-201ENSMUST00000173695 665 ntTSL 3 BASIC9.86□□□□□ -0.83
Col8a1Q00780 Gm37782-201ENSMUST00000194879 678 ntBASIC9.86□□□□□ -0.83
Col8a1Q00780 Gm25053-202ENSMUST00000199731 132 ntBASIC9.86□□□□□ -0.83
Col8a1Q00780 Gm15802-202ENSMUST00000209595 1094 ntTSL 5 BASIC9.86□□□□□ -0.83
Col8a1Q00780 Gm45266-201ENSMUST00000210111 2173 ntBASIC9.86□□□□□ -0.83
Col8a1Q00780 Gm8436-201ENSMUST00000210152 1080 ntBASIC9.86□□□□□ -0.83
Col8a1Q00780 Gm5749-201ENSMUST00000210673 1090 ntBASIC9.86□□□□□ -0.83
Col8a1Q00780 Pbld1-204ENSMUST00000219045 602 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Col8a1Q00780 AC122346.3-201ENSMUST00000223983 306 ntBASIC9.86□□□□□ -0.83
Col8a1Q00780 AC164618.2-201ENSMUST00000224770 573 ntBASIC9.86□□□□□ -0.83
Col8a1Q00780 Tspo2-201ENSMUST00000024794 956 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Col8a1Q00780 Triap1-201ENSMUST00000031508 1088 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Col8a1Q00780 Ephx1-201ENSMUST00000036928 1741 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Col8a1Q00780 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Col8a1Q00780 Ensa-202ENSMUST00000058230 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Col8a1Q00780 Klk1b7-ps-201ENSMUST00000078897 448 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Col8a1Q00780 Gm10263-201ENSMUST00000085163 300 ntBASIC9.86□□□□□ -0.83
Col8a1Q00780 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Col8a1Q00780 Maml3-202ENSMUST00000121440 8288 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Col8a1Q00780 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Col8a1Q00780 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Col8a1Q00780 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC9.86□□□□□ -0.83
Col8a1Q00780 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Col8a1Q00780 Schip1-202ENSMUST00000169909 1517 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Col8a1Q00780 Cast-212ENSMUST00000223309 1529 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Col8a1Q00780 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC9.86□□□□□ -0.83
Col8a1Q00780 Airn-205ENSMUST00000161890 1375 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Col8a1Q00780 Rin2-201ENSMUST00000094480 4657 ntAPPRIS P2 TSL 5 BASIC9.86□□□□□ -0.83
Col8a1Q00780 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Col8a1Q00780 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Col8a1Q00780 Arhgef28-201ENSMUST00000109426 5387 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Col8a1Q00780 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC9.86□□□□□ -0.83
Col8a1Q00780 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC9.86□□□□□ -0.83
Col8a1Q00780 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC9.86□□□□□ -0.83
Col8a1Q00780 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Col8a1Q00780 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC9.85□□□□□ -0.83
Col8a1Q00780 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Col8a1Q00780 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC9.85□□□□□ -0.83
Col8a1Q00780 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Col8a1Q00780 Gm19817-201ENSMUST00000199764 2132 ntBASIC9.85□□□□□ -0.83
Col8a1Q00780 Arnt2-213ENSMUST00000209133 6228 ntAPPRIS ALT2 TSL 5 BASIC9.85□□□□□ -0.83
Col8a1Q00780 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Col8a1Q00780 Pitpnc1-202ENSMUST00000103064 6329 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Col8a1Q00780 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC9.85□□□□□ -0.83
Col8a1Q00780 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Col8a1Q00780 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Col8a1Q00780 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Col8a1Q00780 Gm13286-201ENSMUST00000117750 537 ntBASIC9.85□□□□□ -0.83
Col8a1Q00780 Gm6322-201ENSMUST00000118789 1004 ntBASIC9.85□□□□□ -0.83
Col8a1Q00780 Gm11244-201ENSMUST00000121243 237 ntBASIC9.85□□□□□ -0.83
Col8a1Q00780 Gm11789-203ENSMUST00000140645 737 ntTSL 2 BASIC9.85□□□□□ -0.83
Col8a1Q00780 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC9.85□□□□□ -0.83
Col8a1Q00780 Cideb-201ENSMUST00000001497 1212 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Col8a1Q00780 Gm8459-201ENSMUST00000162504 760 ntBASIC9.85□□□□□ -0.83
Col8a1Q00780 Mir133a-1hg-201ENSMUST00000179771 395 ntTSL 3 BASIC9.85□□□□□ -0.83
Col8a1Q00780 Gm9136-201ENSMUST00000193368 454 ntBASIC9.85□□□□□ -0.83
Col8a1Q00780 Gm42430-201ENSMUST00000197209 616 ntBASIC9.85□□□□□ -0.83
Col8a1Q00780 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Col8a1Q00780 2610318N02Rik-202ENSMUST00000207116 1156 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Col8a1Q00780 Gm6108-201ENSMUST00000208365 367 ntBASIC9.85□□□□□ -0.83
Col8a1Q00780 Gm35657-201ENSMUST00000215869 989 ntTSL 5 BASIC9.85□□□□□ -0.83
Col8a1Q00780 AC134537.1-201ENSMUST00000219205 265 ntBASIC9.85□□□□□ -0.83
Col8a1Q00780 AC121357.1-201ENSMUST00000227365 608 ntBASIC9.85□□□□□ -0.83
Col8a1Q00780 Tex35-201ENSMUST00000027884 909 ntAPPRIS ALT2 TSL 1 (best) BASIC9.85□□□□□ -0.83
Col8a1Q00780 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC9.85□□□□□ -0.83
Col8a1Q00780 Mir326-201ENSMUST00000083637 95 ntBASIC9.85□□□□□ -0.83
Col8a1Q00780 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Col8a1Q00780 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC9.85□□□□□ -0.83
Col8a1Q00780 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC9.85□□□□□ -0.83
Col8a1Q00780 Dnm3-202ENSMUST00000086074 7523 ntAPPRIS ALT2 TSL 5 BASIC9.85□□□□□ -0.83
Col8a1Q00780 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Col8a1Q00780 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC9.85□□□□□ -0.83
Col8a1Q00780 Hcn1-201ENSMUST00000006991 14141 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Col8a1Q00780 Sel1l-210ENSMUST00000178462 6150 ntTSL 5 BASIC9.85□□□□□ -0.83
Col8a1Q00780 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Col8a1Q00780 Pigm-201ENSMUST00000052455 7554 ntAPPRIS P1 BASIC9.85□□□□□ -0.83
Col8a1Q00780 Gm8271-201ENSMUST00000171053 1469 ntAPPRIS P1 TSL 5 BASIC9.85□□□□□ -0.83
Col8a1Q00780 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Col8a1Q00780 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Col8a1Q00780 Tctn1-201ENSMUST00000111738 5717 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Col8a1Q00780 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Retrieved 100 of 76,532 protein–RNA pairs in 56.1 ms