Protein–RNA interactions for Protein: P97496

Smarcc1, SWI/SNF complex subunit SMARCC1, mousemouse

Predictions only

Length 1,104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1P97496 Gm29684-201ENSMUST00000220248 1982 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Smarcc1P97496 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC14.38□□□□□ -0.11
Smarcc1P97496 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Smarcc1P97496 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Smarcc1P97496 Mta1-202ENSMUST00000069690 2697 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Smarcc1P97496 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC14.38□□□□□ -0.11
Smarcc1P97496 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC14.37□□□□□ -0.11
Smarcc1P97496 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smarcc1P97496 Gm20757-201ENSMUST00000182870 1604 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Smarcc1P97496 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smarcc1P97496 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smarcc1P97496 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smarcc1P97496 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smarcc1P97496 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smarcc1P97496 Abi1-204ENSMUST00000114544 2790 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smarcc1P97496 Bcat2-208ENSMUST00000211173 1684 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Smarcc1P97496 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smarcc1P97496 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smarcc1P97496 Ighv1-50-201ENSMUST00000103521 390 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Smarcc1P97496 Gm25148-201ENSMUST00000104611 123 ntBASIC14.37□□□□□ -0.11
Smarcc1P97496 Fas-202ENSMUST00000112472 555 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Smarcc1P97496 Cidec-203ENSMUST00000113091 785 ntAPPRIS ALT1 TSL 3 BASIC14.37□□□□□ -0.11
Smarcc1P97496 9130204K15Rik-202ENSMUST00000150312 696 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Smarcc1P97496 Mrto4-ps2-201ENSMUST00000164169 549 ntBASIC14.37□□□□□ -0.11
Smarcc1P97496 Gm5294-201ENSMUST00000179205 651 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Smarcc1P97496 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Smarcc1P97496 Gm30946-201ENSMUST00000198288 724 ntBASIC14.37□□□□□ -0.11
Smarcc1P97496 Gm43458-201ENSMUST00000200791 462 ntTSL 3 BASIC14.37□□□□□ -0.11
Smarcc1P97496 Akr1c18-201ENSMUST00000021635 1200 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smarcc1P97496 Gstz1-203ENSMUST00000220574 971 ntTSL 2 BASIC14.37□□□□□ -0.11
Smarcc1P97496 AC115304.2-201ENSMUST00000226399 332 ntBASIC14.37□□□□□ -0.11
Smarcc1P97496 AC122035.1-201ENSMUST00000227576 1016 ntBASIC14.37□□□□□ -0.11
Smarcc1P97496 Palb2-204ENSMUST00000106469 2559 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smarcc1P97496 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smarcc1P97496 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC14.37□□□□□ -0.11
Smarcc1P97496 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smarcc1P97496 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smarcc1P97496 Pax5-205ENSMUST00000107827 1315 ntTSL 5 BASIC14.37□□□□□ -0.11
Smarcc1P97496 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smarcc1P97496 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Smarcc1P97496 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smarcc1P97496 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smarcc1P97496 Map7d2-202ENSMUST00000112470 1350 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Smarcc1P97496 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Smarcc1P97496 Sec13-201ENSMUST00000032440 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smarcc1P97496 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC14.36□□□□□ -0.11
Smarcc1P97496 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Smarcc1P97496 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Smarcc1P97496 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smarcc1P97496 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smarcc1P97496 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smarcc1P97496 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smarcc1P97496 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smarcc1P97496 Acnat2-202ENSMUST00000107698 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smarcc1P97496 5330413D20Rik-201ENSMUST00000208649 1416 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Smarcc1P97496 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smarcc1P97496 Gm16341-201ENSMUST00000126385 377 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Smarcc1P97496 Tspan32os-201ENSMUST00000131740 975 ntTSL 2 BASIC14.36□□□□□ -0.11
Smarcc1P97496 Gm13802-201ENSMUST00000150159 663 ntTSL 3 BASIC14.36□□□□□ -0.11
Smarcc1P97496 1700057H21Rik-202ENSMUST00000154530 506 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Smarcc1P97496 Pax4-202ENSMUST00000164519 1229 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smarcc1P97496 H2al1i-201ENSMUST00000164729 318 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Smarcc1P97496 Gm9372-201ENSMUST00000168454 430 ntBASIC14.36□□□□□ -0.11
Smarcc1P97496 Krtcap2-204ENSMUST00000168900 582 ntTSL 3 BASIC14.36□□□□□ -0.11
Smarcc1P97496 Pax4-203ENSMUST00000171089 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smarcc1P97496 H2al1h-201ENSMUST00000177926 318 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Smarcc1P97496 H2al1d-201ENSMUST00000178595 318 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Smarcc1P97496 H2al1c-201ENSMUST00000178806 318 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Smarcc1P97496 H2al1f-201ENSMUST00000179004 318 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Smarcc1P97496 2410002F23Rik-220ENSMUST00000191537 872 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Smarcc1P97496 Gm43547-201ENSMUST00000197729 328 ntBASIC14.36□□□□□ -0.11
Smarcc1P97496 Klk1b19-ps-201ENSMUST00000205322 696 ntBASIC14.36□□□□□ -0.11
Smarcc1P97496 Gm4903-201ENSMUST00000210462 405 ntBASIC14.36□□□□□ -0.11
Smarcc1P97496 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC14.36□□□□□ -0.11
Smarcc1P97496 Apoa5-205ENSMUST00000215187 495 ntTSL 5 BASIC14.36□□□□□ -0.11
Smarcc1P97496 Gm36176-201ENSMUST00000218749 501 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Smarcc1P97496 CT010480.2-201ENSMUST00000225424 737 ntBASIC14.36□□□□□ -0.11
Smarcc1P97496 Mustn1-201ENSMUST00000040715 1236 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smarcc1P97496 Try5-201ENSMUST00000064324 801 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smarcc1P97496 Olfr372-201ENSMUST00000093434 1016 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Smarcc1P97496 Gm13271-201ENSMUST00000094992 549 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Smarcc1P97496 Rnf17-202ENSMUST00000223627 2077 ntBASIC14.36□□□□□ -0.11
Smarcc1P97496 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Smarcc1P97496 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
Smarcc1P97496 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smarcc1P97496 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smarcc1P97496 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Smarcc1P97496 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smarcc1P97496 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
Smarcc1P97496 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smarcc1P97496 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC14.36□□□□□ -0.11
Smarcc1P97496 Slc40a1-201ENSMUST00000027137 3370 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smarcc1P97496 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smarcc1P97496 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smarcc1P97496 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Smarcc1P97496 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Smarcc1P97496 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Smarcc1P97496 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Smarcc1P97496 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Smarcc1P97496 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 51.4 ms