Protein–RNA interactions for Protein: P97459

Npas1, Neuronal PAS domain-containing protein 1, mousemouse

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npas1P97459 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Npas1P97459 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC9.63□□□□□ -0.87
Npas1P97459 Gm37201-201ENSMUST00000191845 523 ntBASIC9.63□□□□□ -0.87
Npas1P97459 Gm43818-201ENSMUST00000200605 466 ntBASIC9.63□□□□□ -0.87
Npas1P97459 Rpl18-207ENSMUST00000210640 2989 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Npas1P97459 Gm40466-201ENSMUST00000212174 422 ntBASIC9.63□□□□□ -0.87
Npas1P97459 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC9.63□□□□□ -0.87
Npas1P97459 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC9.63□□□□□ -0.87
Npas1P97459 AC166095.1-201ENSMUST00000223731 1241 ntBASIC9.63□□□□□ -0.87
Npas1P97459 Larp7-201ENSMUST00000029588 2121 ntAPPRIS P1 TSL 5 BASIC9.63□□□□□ -0.87
Npas1P97459 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Npas1P97459 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC9.63□□□□□ -0.87
Npas1P97459 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC9.63□□□□□ -0.87
Npas1P97459 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Npas1P97459 3425401B19Rik-201ENSMUST00000096038 5547 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Npas1P97459 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC9.63□□□□□ -0.87
Npas1P97459 Fut10-202ENSMUST00000110527 2327 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Npas1P97459 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Npas1P97459 Hnrnpc-210ENSMUST00000228232 2535 ntAPPRIS P5 BASIC9.63□□□□□ -0.87
Npas1P97459 Smok3a-201ENSMUST00000085886 2723 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Npas1P97459 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Npas1P97459 Sept9-203ENSMUST00000100193 2924 ntAPPRIS P3 TSL 1 (best) BASIC9.63□□□□□ -0.87
Npas1P97459 Ndrg4-201ENSMUST00000041318 3101 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Npas1P97459 Auts2-209ENSMUST00000161804 5392 ntAPPRIS P5 TSL 1 (best) BASIC9.63□□□□□ -0.87
Npas1P97459 Plekha7-201ENSMUST00000084664 4312 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Npas1P97459 Slc26a11-201ENSMUST00000050880 2695 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Npas1P97459 Gfm2-201ENSMUST00000022170 3089 ntAPPRIS ALT2 TSL 2 BASIC9.63□□□□□ -0.87
Npas1P97459 Tsix-202ENSMUST00000211291 3263 ntTSL 5 BASIC9.63□□□□□ -0.87
Npas1P97459 Ddr1-203ENSMUST00000117301 3874 ntAPPRIS P3 TSL 1 (best) BASIC9.63□□□□□ -0.87
Npas1P97459 Foxn2-201ENSMUST00000112238 5085 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Npas1P97459 Slc45a3-202ENSMUST00000177943 3212 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Npas1P97459 Ttc17-203ENSMUST00000111237 4409 ntAPPRIS P1 TSL 5 BASIC9.63□□□□□ -0.87
Npas1P97459 Rpap1-202ENSMUST00000099529 4813 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Npas1P97459 Pkp4-201ENSMUST00000037903 4378 ntTSL 5 BASIC9.63□□□□□ -0.87
Npas1P97459 Odf2-207ENSMUST00000113762 2353 ntTSL 5 BASIC9.63□□□□□ -0.87
Npas1P97459 Vcan-202ENSMUST00000109544 5702 ntTSL 5 BASIC9.63□□□□□ -0.87
Npas1P97459 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC9.63□□□□□ -0.87
Npas1P97459 Gm18782-201ENSMUST00000209023 1399 ntBASIC9.63□□□□□ -0.87
Npas1P97459 Gm7964-201ENSMUST00000051522 1378 ntBASIC9.63□□□□□ -0.87
Npas1P97459 Synpo2l-203ENSMUST00000119483 3696 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Npas1P97459 Ppp6r3-203ENSMUST00000172362 4633 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Npas1P97459 Fbxo43-201ENSMUST00000058643 4035 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Npas1P97459 Itga11-201ENSMUST00000034774 4969 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Npas1P97459 Gm43086-201ENSMUST00000202536 2657 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Npas1P97459 Lin52-201ENSMUST00000137170 2270 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Npas1P97459 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC9.62□□□□□ -0.87
Npas1P97459 Btrc-206ENSMUST00000224102 3037 ntBASIC9.62□□□□□ -0.87
Npas1P97459 Lck-208ENSMUST00000167288 2074 ntTSL 5 BASIC9.62□□□□□ -0.87
Npas1P97459 Rhbdf2-202ENSMUST00000103029 3593 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Npas1P97459 Atxn7l1-204ENSMUST00000125192 2644 ntAPPRIS ALT2 TSL 5 BASIC9.62□□□□□ -0.87
Npas1P97459 Ankrd26-201ENSMUST00000112830 6930 ntAPPRIS P1 TSL 5 BASIC9.62□□□□□ -0.87
Npas1P97459 Fbln2-202ENSMUST00000113498 4644 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Npas1P97459 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC9.62□□□□□ -0.87
Npas1P97459 Gm28774-201ENSMUST00000187087 1498 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Npas1P97459 Cd2bp2-203ENSMUST00000205316 2912 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Npas1P97459 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC9.62□□□□□ -0.87
Npas1P97459 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Npas1P97459 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC9.62□□□□□ -0.87
Npas1P97459 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Npas1P97459 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Npas1P97459 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC9.62□□□□□ -0.87
Npas1P97459 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC9.62□□□□□ -0.87
Npas1P97459 Gm5706-201ENSMUST00000181525 993 ntBASIC9.62□□□□□ -0.87
Npas1P97459 Gm27023-201ENSMUST00000182372 285 ntBASIC9.62□□□□□ -0.87
Npas1P97459 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC9.62□□□□□ -0.87
Npas1P97459 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Npas1P97459 Gm9299-201ENSMUST00000206392 1140 ntBASIC9.62□□□□□ -0.87
Npas1P97459 1700016D06Rik-201ENSMUST00000033906 1263 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Npas1P97459 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Npas1P97459 Il33-202ENSMUST00000120388 2537 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Npas1P97459 Lhfpl2-201ENSMUST00000054274 4348 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Npas1P97459 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Npas1P97459 Vamp1-202ENSMUST00000063588 1400 ntTSL 2 BASIC9.62□□□□□ -0.87
Npas1P97459 Zfp217-202ENSMUST00000109155 5670 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Npas1P97459 Slc5a9-201ENSMUST00000102719 2460 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Npas1P97459 Susd2-202ENSMUST00000095541 3151 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Npas1P97459 Scaf1-206ENSMUST00000211735 4209 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Npas1P97459 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Npas1P97459 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Npas1P97459 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC9.62□□□□□ -0.87
Npas1P97459 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC9.62□□□□□ -0.87
Npas1P97459 Gckr-202ENSMUST00000201166 2272 ntAPPRIS ALT2 TSL 5 BASIC9.62□□□□□ -0.87
Npas1P97459 Ntrk2-207ENSMUST00000225488 4706 ntAPPRIS P1 BASIC9.62□□□□□ -0.87
Npas1P97459 Klhl7-201ENSMUST00000030841 2966 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Npas1P97459 Trem1-201ENSMUST00000048782 2993 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Npas1P97459 Ctnnd1-204ENSMUST00000099941 5783 ntTSL 5 BASIC9.62□□□□□ -0.87
Npas1P97459 Sema4g-201ENSMUST00000026225 4548 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Npas1P97459 Marveld2-204ENSMUST00000225754 3111 ntAPPRIS P1 BASIC9.62□□□□□ -0.87
Npas1P97459 Nhlrc3-201ENSMUST00000056749 5047 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Npas1P97459 Tgoln1-201ENSMUST00000070524 5013 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Npas1P97459 Wwp2-201ENSMUST00000166615 4314 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Npas1P97459 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Npas1P97459 Bcat1-203ENSMUST00000111742 2556 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Npas1P97459 Timd2-202ENSMUST00000109225 2236 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Npas1P97459 Gm5420-201ENSMUST00000071008 2206 ntTSL 2 BASIC9.62□□□□□ -0.87
Npas1P97459 6030443J06Rik-201ENSMUST00000181209 2380 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Npas1P97459 AC126257.1-201ENSMUST00000213195 1536 ntBASIC9.61□□□□□ -0.87
Npas1P97459 Loxl4-201ENSMUST00000026190 3738 ntAPPRIS P3 TSL 1 (best) BASIC9.61□□□□□ -0.87
Npas1P97459 Prkcd-208ENSMUST00000112211 2851 ntAPPRIS ALT2 TSL 5 BASIC9.61□□□□□ -0.87
Npas1P97459 Syk-202ENSMUST00000118756 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 66.3 ms