Protein–RNA interactions for Protein: P86449

Trim43c, Tripartite motif-containing protein 43C, mousemouse

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43cP86449 4833405L11Rik-202ENSMUST00000222639 2145 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trim43cP86449 Pif1-203ENSMUST00000134538 3395 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim43cP86449 Gm37600-201ENSMUST00000193764 3292 ntBASIC12.49□□□□□ -0.41
Trim43cP86449 Usp22-201ENSMUST00000041683 4434 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim43cP86449 Lrrc8a-201ENSMUST00000095078 4301 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Trim43cP86449 Gm36975-201ENSMUST00000194105 1828 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trim43cP86449 Scoc-202ENSMUST00000167525 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim43cP86449 Gm8110-202ENSMUST00000211297 1782 ntTSL 5 BASIC12.48□□□□□ -0.41
Trim43cP86449 Slc10a3-204ENSMUST00000114147 1708 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Trim43cP86449 1700123L14Rik-201ENSMUST00000090061 1747 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Trim43cP86449 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC12.48□□□□□ -0.41
Trim43cP86449 Gm6831-202ENSMUST00000213025 1673 ntBASIC12.48□□□□□ -0.41
Trim43cP86449 Gm21939-201ENSMUST00000221137 2773 ntBASIC12.48□□□□□ -0.41
Trim43cP86449 Gm33366-201ENSMUST00000195583 3827 ntBASIC12.48□□□□□ -0.41
Trim43cP86449 Akap5-203ENSMUST00000172992 2711 ntAPPRIS ALT2 TSL 3 BASIC12.48□□□□□ -0.41
Trim43cP86449 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim43cP86449 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC12.48□□□□□ -0.41
Trim43cP86449 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim43cP86449 Paqr8-203ENSMUST00000187651 1463 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Trim43cP86449 Cd79b-201ENSMUST00000044228 1431 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim43cP86449 Spats2l-201ENSMUST00000163239 2313 ntTSL 5 BASIC12.48□□□□□ -0.41
Trim43cP86449 Foxp1-221ENSMUST00000176632 2336 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Trim43cP86449 Foxp1-222ENSMUST00000176850 2339 ntAPPRIS ALT1 TSL 5 BASIC12.48□□□□□ -0.41
Trim43cP86449 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trim43cP86449 Zfp68-201ENSMUST00000063262 2254 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim43cP86449 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim43cP86449 Platr7-201ENSMUST00000181466 1334 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trim43cP86449 Gm9387-201ENSMUST00000098624 1320 ntBASIC12.48□□□□□ -0.41
Trim43cP86449 Col9a1-202ENSMUST00000088349 3059 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trim43cP86449 Krtap4-8-201ENSMUST00000107439 983 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Trim43cP86449 Gm12247-201ENSMUST00000117585 670 ntBASIC12.48□□□□□ -0.41
Trim43cP86449 Gm11244-201ENSMUST00000121243 237 ntBASIC12.48□□□□□ -0.41
Trim43cP86449 Gm15329-201ENSMUST00000121408 155 ntBASIC12.48□□□□□ -0.41
Trim43cP86449 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trim43cP86449 B9d1os-201ENSMUST00000137010 674 ntBASIC12.48□□□□□ -0.41
Trim43cP86449 Xpnpep1-211ENSMUST00000183274 2120 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trim43cP86449 1700030I03Rik-201ENSMUST00000192978 942 ntBASIC12.48□□□□□ -0.41
Trim43cP86449 Gm6439-201ENSMUST00000199849 862 ntBASIC12.48□□□□□ -0.41
Trim43cP86449 Gm8615-202ENSMUST00000201946 737 ntTSL 3 BASIC12.48□□□□□ -0.41
Trim43cP86449 Olfr707-202ENSMUST00000208759 1242 ntAPPRIS P1 TSL 3 BASIC12.48□□□□□ -0.41
Trim43cP86449 Cotl1-203ENSMUST00000211873 826 ntTSL 5 BASIC12.48□□□□□ -0.41
Trim43cP86449 Gm2517-201ENSMUST00000215651 348 ntBASIC12.48□□□□□ -0.41
Trim43cP86449 Gm6722-201ENSMUST00000221586 390 ntBASIC12.48□□□□□ -0.41
Trim43cP86449 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim43cP86449 Gsdmc2-202ENSMUST00000188404 2078 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim43cP86449 Hgs-203ENSMUST00000106205 2898 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Trim43cP86449 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Trim43cP86449 Dcaf8-202ENSMUST00000191689 2754 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim43cP86449 Ttc25-201ENSMUST00000006976 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim43cP86449 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trim43cP86449 Gm26631-201ENSMUST00000181462 2505 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trim43cP86449 Gm10110-202ENSMUST00000228705 3220 ntBASIC12.48□□□□□ -0.41
Trim43cP86449 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim43cP86449 Rbm6-207ENSMUST00000183032 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim43cP86449 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim43cP86449 Hpgd-201ENSMUST00000034026 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim43cP86449 Rbm10-205ENSMUST00000115375 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim43cP86449 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim43cP86449 Cyp4f16-208ENSMUST00000169591 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim43cP86449 Serpina1f-202ENSMUST00000117053 2830 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trim43cP86449 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim43cP86449 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim43cP86449 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim43cP86449 Gm37324-201ENSMUST00000194500 4504 ntBASIC12.47□□□□□ -0.41
Trim43cP86449 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim43cP86449 Nox4-201ENSMUST00000032781 3753 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim43cP86449 Ighg2b-202ENSMUST00000192188 2566 ntAPPRIS P5 BASIC12.47□□□□□ -0.41
Trim43cP86449 Akr1c6-201ENSMUST00000021630 1396 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim43cP86449 Prrxl1-204ENSMUST00000189022 2985 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim43cP86449 Tmem246-201ENSMUST00000042750 2989 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim43cP86449 Atp4a-204ENSMUST00000170371 3447 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trim43cP86449 Tef-202ENSMUST00000109553 4401 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim43cP86449 Mmp25-201ENSMUST00000024696 3373 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim43cP86449 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim43cP86449 Vmn1r45-201ENSMUST00000054202 3341 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim43cP86449 Ighv1-58-201ENSMUST00000103529 351 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Trim43cP86449 Tcf7l2-206ENSMUST00000111652 1041 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trim43cP86449 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC12.47□□□□□ -0.41
Trim43cP86449 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trim43cP86449 Gm16312-201ENSMUST00000156285 362 ntTSL 3 BASIC12.47□□□□□ -0.41
Trim43cP86449 Gm20535-201ENSMUST00000173157 1268 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trim43cP86449 Spdye4c-203ENSMUST00000178601 1020 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim43cP86449 Gm21778-201ENSMUST00000178779 471 ntBASIC12.47□□□□□ -0.41
Trim43cP86449 Mir6546-201ENSMUST00000184460 62 ntBASIC12.47□□□□□ -0.41
Trim43cP86449 Klk1b19-ps-201ENSMUST00000205322 696 ntBASIC12.47□□□□□ -0.41
Trim43cP86449 Saa2-202ENSMUST00000210272 511 ntTSL 3 BASIC12.47□□□□□ -0.41
Trim43cP86449 Gm45339-201ENSMUST00000210823 877 ntTSL 5 BASIC12.47□□□□□ -0.41
Trim43cP86449 Olfr411-201ENSMUST00000080365 1049 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Trim43cP86449 Gm20498-203ENSMUST00000166664 2284 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
Trim43cP86449 Pla2g4b-201ENSMUST00000126150 2790 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Trim43cP86449 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Trim43cP86449 Gusb-201ENSMUST00000026613 2687 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim43cP86449 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim43cP86449 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC12.47□□□□□ -0.41
Trim43cP86449 Dck-201ENSMUST00000031311 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim43cP86449 Ttpa-201ENSMUST00000098244 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim43cP86449 Klhl14-202ENSMUST00000122333 4423 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Trim43cP86449 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim43cP86449 Uspl1-201ENSMUST00000050472 3757 ntAPPRIS P4 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim43cP86449 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 42.2 ms