Protein–RNA interactions for Protein: P70390

Shox2, Short stature homeobox protein 2, mousemouse

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shox2P70390 Arhgef2-231ENSMUST00000177498 3966 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Shox2P70390 Gm5620-201ENSMUST00000077991 1348 ntBASIC11.3□□□□□ -0.6
Shox2P70390 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC11.3□□□□□ -0.6
Shox2P70390 Lpin3-204ENSMUST00000109457 3215 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Shox2P70390 Rad1-202ENSMUST00000100775 4085 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Shox2P70390 Grik4-201ENSMUST00000034515 3413 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Shox2P70390 Gm21817-201ENSMUST00000178584 2583 ntBASIC11.29□□□□□ -0.6
Shox2P70390 P2ry1-202ENSMUST00000193201 3614 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Shox2P70390 Zfp68-203ENSMUST00000110905 4749 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Shox2P70390 Tubb5-201ENSMUST00000001566 2649 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Shox2P70390 Gm8131-201ENSMUST00000213783 1570 ntBASIC11.29□□□□□ -0.6
Shox2P70390 Specc1-214ENSMUST00000202389 3363 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Shox2P70390 Kif1a-203ENSMUST00000171556 5391 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Shox2P70390 Slc19a1-208ENSMUST00000136925 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Shox2P70390 Ighv1-58-201ENSMUST00000103529 351 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Shox2P70390 Ankrd60-201ENSMUST00000109112 833 ntAPPRIS ALT2 TSL 3 BASIC11.29□□□□□ -0.6
Shox2P70390 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC11.29□□□□□ -0.6
Shox2P70390 Mir1894-201ENSMUST00000122802 81 ntBASIC11.29□□□□□ -0.6
Shox2P70390 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Shox2P70390 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC11.29□□□□□ -0.6
Shox2P70390 Gm14198-201ENSMUST00000153208 948 ntTSL 2 BASIC11.29□□□□□ -0.6
Shox2P70390 Gm25043-201ENSMUST00000158604 212 ntBASIC11.29□□□□□ -0.6
Shox2P70390 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC11.29□□□□□ -0.6
Shox2P70390 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
Shox2P70390 Gm6244-201ENSMUST00000178732 841 ntBASIC11.29□□□□□ -0.6
Shox2P70390 Park2-204ENSMUST00000179624 1108 ntTSL 5 BASIC11.29□□□□□ -0.6
Shox2P70390 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC11.29□□□□□ -0.6
Shox2P70390 Gm43349-201ENSMUST00000200047 503 ntTSL 2 BASIC11.29□□□□□ -0.6
Shox2P70390 Gm4935-201ENSMUST00000221316 1198 ntBASIC11.29□□□□□ -0.6
Shox2P70390 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Shox2P70390 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Shox2P70390 Gtf3c1-204ENSMUST00000205659 6570 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Shox2P70390 Trim65-202ENSMUST00000106440 4040 ntTSL 5 BASIC11.29□□□□□ -0.6
Shox2P70390 Vwa5b2-207ENSMUST00000159780 4042 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Shox2P70390 Sptbn2-201ENSMUST00000008991 8251 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Shox2P70390 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC11.29□□□□□ -0.6
Shox2P70390 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Shox2P70390 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC11.29□□□□□ -0.6
Shox2P70390 Fgf1-202ENSMUST00000115582 2449 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Shox2P70390 Setd5-201ENSMUST00000042889 6755 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Shox2P70390 Ttll1-201ENSMUST00000016897 2057 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Shox2P70390 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Shox2P70390 Fry-201ENSMUST00000087204 10893 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Shox2P70390 Adarb1-204ENSMUST00000105406 6662 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Shox2P70390 AC144938.1-201ENSMUST00000223994 2167 ntBASIC11.28□□□□□ -0.6
Shox2P70390 Lipg-201ENSMUST00000066532 3787 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Shox2P70390 Plin4-201ENSMUST00000002908 5755 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Shox2P70390 Atl2-201ENSMUST00000068282 3618 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Shox2P70390 Sorbs1-201ENSMUST00000099466 2223 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Shox2P70390 Trmt12-201ENSMUST00000036937 4454 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Shox2P70390 Tmem126b-201ENSMUST00000032843 2259 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Shox2P70390 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Shox2P70390 Ypel4-201ENSMUST00000090729 1676 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Shox2P70390 Syk-202ENSMUST00000118756 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Shox2P70390 Nufip2-204ENSMUST00000181023 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Shox2P70390 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Shox2P70390 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Shox2P70390 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC11.28□□□□□ -0.6
Shox2P70390 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC11.28□□□□□ -0.6
Shox2P70390 Gm25226-201ENSMUST00000158198 123 ntBASIC11.28□□□□□ -0.6
Shox2P70390 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC11.28□□□□□ -0.6
Shox2P70390 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC11.28□□□□□ -0.6
Shox2P70390 Slpi-202ENSMUST00000165980 488 ntAPPRIS ALT2 TSL 3 BASIC11.28□□□□□ -0.6
Shox2P70390 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Shox2P70390 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC11.28□□□□□ -0.6
Shox2P70390 Gm28937-201ENSMUST00000185413 695 ntBASIC11.28□□□□□ -0.6
Shox2P70390 Gm29187-201ENSMUST00000186681 689 ntTSL 3 BASIC11.28□□□□□ -0.6
Shox2P70390 Gm29400-201ENSMUST00000187208 695 ntBASIC11.28□□□□□ -0.6
Shox2P70390 Gm28662-201ENSMUST00000188446 695 ntBASIC11.28□□□□□ -0.6
Shox2P70390 Gm28251-201ENSMUST00000188835 695 ntBASIC11.28□□□□□ -0.6
Shox2P70390 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC11.28□□□□□ -0.6
Shox2P70390 Gm4857-201ENSMUST00000192718 785 ntBASIC11.28□□□□□ -0.6
Shox2P70390 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC11.28□□□□□ -0.6
Shox2P70390 Gm37318-201ENSMUST00000194325 695 ntBASIC11.28□□□□□ -0.6
Shox2P70390 Gm38017-201ENSMUST00000194768 695 ntBASIC11.28□□□□□ -0.6
Shox2P70390 Pcdhgb4-202ENSMUST00000195363 4665 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Shox2P70390 Gm37287-201ENSMUST00000195449 695 ntBASIC11.28□□□□□ -0.6
Shox2P70390 Gm37793-201ENSMUST00000195548 695 ntBASIC11.28□□□□□ -0.6
Shox2P70390 Gm44008-201ENSMUST00000204345 412 ntBASIC11.28□□□□□ -0.6
Shox2P70390 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC11.28□□□□□ -0.6
Shox2P70390 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Shox2P70390 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Shox2P70390 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Shox2P70390 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Shox2P70390 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Shox2P70390 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Shox2P70390 Gm19040-201ENSMUST00000203280 4726 ntBASIC11.28□□□□□ -0.6
Shox2P70390 Arntl2-202ENSMUST00000111636 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Shox2P70390 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Shox2P70390 5730405O15Rik-201ENSMUST00000127521 1749 ntTSL 2 BASIC11.28□□□□□ -0.6
Shox2P70390 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Shox2P70390 Gripap1-203ENSMUST00000115675 3015 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Shox2P70390 Zfp780b-201ENSMUST00000081618 3004 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Shox2P70390 Megf11-202ENSMUST00000093829 3652 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Shox2P70390 Olfr279-203ENSMUST00000216822 5605 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Shox2P70390 Arfgap3-201ENSMUST00000067215 2619 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Shox2P70390 Ascc2-202ENSMUST00000109930 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Shox2P70390 Sp6-201ENSMUST00000047997 3546 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Shox2P70390 Lmo3-207ENSMUST00000163065 2425 ntTSL 3 BASIC11.28□□□□□ -0.6
Shox2P70390 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 54.8 ms