Protein–RNA interactions for Protein: P62313

Lsm6, U6 snRNA-associated Sm-like protein LSm6, mousemouse

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm6P62313 Gm29171-201ENSMUST00000191397 486 ntBASIC10.1□□□□□ -0.79
Lsm6P62313 4930422M22Rik-201ENSMUST00000191492 948 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Lsm6P62313 Gm6653-201ENSMUST00000218063 1288 ntBASIC10.1□□□□□ -0.79
Lsm6P62313 Npff-201ENSMUST00000023814 540 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Lsm6P62313 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Lsm6P62313 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Lsm6P62313 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Lsm6P62313 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Lsm6P62313 Dennd4a-201ENSMUST00000038890 8645 ntAPPRIS P1 TSL 5 BASIC10.1□□□□□ -0.79
Lsm6P62313 Kif2a-202ENSMUST00000117423 2023 ntTSL 5 BASIC10.1□□□□□ -0.79
Lsm6P62313 Celf1-204ENSMUST00000111448 4432 ntAPPRIS ALT1 TSL 5 BASIC10.1□□□□□ -0.79
Lsm6P62313 Cttnbp2nl-201ENSMUST00000077548 4946 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Lsm6P62313 Gpat3-202ENSMUST00000092990 3035 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Lsm6P62313 Rbm14-202ENSMUST00000113793 3508 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Lsm6P62313 Unkl-204ENSMUST00000160896 4787 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Lsm6P62313 Gm43931-201ENSMUST00000204817 2870 ntBASIC10.1□□□□□ -0.79
Lsm6P62313 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Lsm6P62313 4931428F04Rik-201ENSMUST00000014981 3492 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Lsm6P62313 Eya2-201ENSMUST00000063433 2460 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Lsm6P62313 Samd4b-201ENSMUST00000040531 4349 ntAPPRIS P1 TSL 5 BASIC10.1□□□□□ -0.79
Lsm6P62313 Mfsd14b-203ENSMUST00000155487 3832 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Lsm6P62313 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Lsm6P62313 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Lsm6P62313 B4galt4-201ENSMUST00000023482 2304 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Lsm6P62313 E230029C05Rik-203ENSMUST00000208028 2066 ntBASIC10.1□□□□□ -0.79
Lsm6P62313 Tnc-202ENSMUST00000107371 2928 ntTSL 5 BASIC10.1□□□□□ -0.79
Lsm6P62313 Tcp11l1-202ENSMUST00000111118 5474 ntAPPRIS P1 TSL 5 BASIC10.1□□□□□ -0.79
Lsm6P62313 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC10.09□□□□□ -0.79
Lsm6P62313 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC10.09□□□□□ -0.79
Lsm6P62313 Ints6l-207ENSMUST00000186445 3608 ntAPPRIS P1 TSL 2 BASIC10.09□□□□□ -0.79
Lsm6P62313 Gm17029-203ENSMUST00000153443 2758 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Lsm6P62313 Msantd1-201ENSMUST00000050535 2793 ntAPPRIS P2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Lsm6P62313 Btbd9-202ENSMUST00000168787 6857 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Lsm6P62313 Calm1-201ENSMUST00000001204 3987 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Lsm6P62313 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC10.09□□□□□ -0.79
Lsm6P62313 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC10.09□□□□□ -0.79
Lsm6P62313 Tpd52l2-202ENSMUST00000069712 1799 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Lsm6P62313 Dglucy-202ENSMUST00000110069 3058 ntAPPRIS P2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Lsm6P62313 Odf2-209ENSMUST00000113764 2450 ntAPPRIS P3 TSL 5 BASIC10.09□□□□□ -0.79
Lsm6P62313 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Lsm6P62313 Gm26811-201ENSMUST00000181258 5485 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Lsm6P62313 Gm20757-201ENSMUST00000182870 1604 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Lsm6P62313 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Lsm6P62313 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Lsm6P62313 Nudt1-205ENSMUST00000110827 744 ntAPPRIS P1 TSL 5 BASIC10.09□□□□□ -0.79
Lsm6P62313 Gm15515-201ENSMUST00000117827 822 ntBASIC10.09□□□□□ -0.79
Lsm6P62313 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC10.09□□□□□ -0.79
Lsm6P62313 Gm8199-201ENSMUST00000121323 823 ntBASIC10.09□□□□□ -0.79
Lsm6P62313 Gm7150-201ENSMUST00000122032 981 ntBASIC10.09□□□□□ -0.79
Lsm6P62313 Asb8-202ENSMUST00000123626 1100 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Lsm6P62313 Asb8-203ENSMUST00000123922 1162 ntAPPRIS P1 TSL 3 BASIC10.09□□□□□ -0.79
Lsm6P62313 Gm15972-201ENSMUST00000132571 418 ntTSL 2 BASIC10.09□□□□□ -0.79
Lsm6P62313 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC10.09□□□□□ -0.79
Lsm6P62313 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Lsm6P62313 Gm14198-201ENSMUST00000153208 948 ntTSL 2 BASIC10.09□□□□□ -0.79
Lsm6P62313 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Lsm6P62313 Gm8459-201ENSMUST00000162504 760 ntBASIC10.09□□□□□ -0.79
Lsm6P62313 Hspb9-202ENSMUST00000169833 726 ntAPPRIS P2 BASIC10.09□□□□□ -0.79
Lsm6P62313 Gm20495-201ENSMUST00000173902 235 ntBASIC10.09□□□□□ -0.79
Lsm6P62313 Gm19705-203ENSMUST00000181491 678 ntTSL 5 BASIC10.09□□□□□ -0.79
Lsm6P62313 Gm27552-201ENSMUST00000183351 62 ntBASIC10.09□□□□□ -0.79
Lsm6P62313 Gm27844-201ENSMUST00000183613 62 ntBASIC10.09□□□□□ -0.79
Lsm6P62313 Gm5733-201ENSMUST00000190232 939 ntBASIC10.09□□□□□ -0.79
Lsm6P62313 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC10.09□□□□□ -0.79
Lsm6P62313 Gm43438-201ENSMUST00000198133 379 ntBASIC10.09□□□□□ -0.79
Lsm6P62313 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Lsm6P62313 4930423D24Rik-202ENSMUST00000219785 554 ntTSL 5 BASIC10.09□□□□□ -0.79
Lsm6P62313 Gm9257-201ENSMUST00000221254 232 ntBASIC10.09□□□□□ -0.79
Lsm6P62313 CT573034.1-201ENSMUST00000222983 313 ntBASIC10.09□□□□□ -0.79
Lsm6P62313 CT009713.10-202ENSMUST00000225734 696 ntBASIC10.09□□□□□ -0.79
Lsm6P62313 CT025694.1-201ENSMUST00000226188 934 ntBASIC10.09□□□□□ -0.79
Lsm6P62313 AC093022.1-201ENSMUST00000226949 1072 ntBASIC10.09□□□□□ -0.79
Lsm6P62313 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Lsm6P62313 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC10.09□□□□□ -0.79
Lsm6P62313 Mir219a-1-201ENSMUST00000083621 110 ntBASIC10.09□□□□□ -0.79
Lsm6P62313 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC10.09□□□□□ -0.79
Lsm6P62313 Gm38140-201ENSMUST00000193617 2755 ntBASIC10.09□□□□□ -0.79
Lsm6P62313 Gm33677-201ENSMUST00000220074 2765 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Lsm6P62313 Pcgf3-201ENSMUST00000046975 7708 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Lsm6P62313 Vstm2a-202ENSMUST00000109647 1745 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Lsm6P62313 Cyb5r3-202ENSMUST00000162178 2547 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Lsm6P62313 Traf7-202ENSMUST00000088464 2504 ntAPPRIS P1 TSL 5 BASIC10.09□□□□□ -0.79
Lsm6P62313 Prdm1-201ENSMUST00000039174 5281 ntAPPRIS ALT2 TSL 2 BASIC10.09□□□□□ -0.79
Lsm6P62313 Slc36a4-201ENSMUST00000061568 6539 ntAPPRIS P2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Lsm6P62313 Gm14025-201ENSMUST00000145798 4242 ntAPPRIS P1 TSL 5 BASIC10.09□□□□□ -0.79
Lsm6P62313 Hyal3-201ENSMUST00000040059 1830 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Lsm6P62313 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Lsm6P62313 Clec10a-201ENSMUST00000000327 1454 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Lsm6P62313 Ap1s2-203ENSMUST00000112294 3199 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Lsm6P62313 Hvcn1-202ENSMUST00000100747 2805 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Lsm6P62313 Clec16a-201ENSMUST00000038145 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Lsm6P62313 Cd2bp2-207ENSMUST00000206026 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Lsm6P62313 Olfr1344-202ENSMUST00000218906 2590 ntAPPRIS P1 TSL 5 BASIC10.09□□□□□ -0.79
Lsm6P62313 Fcrla-201ENSMUST00000046322 1679 ntAPPRIS P4 TSL 1 (best) BASIC10.09□□□□□ -0.79
Lsm6P62313 Gm38055-201ENSMUST00000195353 2217 ntBASIC10.09□□□□□ -0.79
Lsm6P62313 Galntl6-202ENSMUST00000098757 2210 ntTSL 5 BASIC10.09□□□□□ -0.79
Lsm6P62313 Magel2-201ENSMUST00000080403 4631 ntAPPRIS P1 BASIC10.08□□□□□ -0.8
Lsm6P62313 Kirrel3-209ENSMUST00000190549 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Lsm6P62313 Tfr2-207ENSMUST00000198866 3072 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Lsm6P62313 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 77.5 ms