Protein–RNA interactions for Protein: P59708

Sf3b6, Splicing factor 3B subunit 6, mousemouse

Known RBP Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b6P59708 1500012K07Rik-201ENSMUST00000181846 2345 ntTSL 5 BASIC10.22□□□□□ -0.77
Sf3b6P59708 Cycs-202ENSMUST00000161401 3123 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Sf3b6P59708 Atp1a2-202ENSMUST00000097464 3186 ntTSL 5 BASIC10.22□□□□□ -0.77
Sf3b6P59708 Wdr78-203ENSMUST00000106868 4045 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
Sf3b6P59708 Stk38-201ENSMUST00000009138 3288 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Sf3b6P59708 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Sf3b6P59708 Lgi1-204ENSMUST00000196090 1789 ntTSL 5 BASIC10.21□□□□□ -0.77
Sf3b6P59708 Tdrd3-202ENSMUST00000168275 2657 ntAPPRIS P3 TSL 1 (best) BASIC10.21□□□□□ -0.77
Sf3b6P59708 Gm13398-201ENSMUST00000149378 2837 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Sf3b6P59708 Pin1-201ENSMUST00000034689 3843 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Sf3b6P59708 Atg9b-201ENSMUST00000059401 3902 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Sf3b6P59708 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC10.21□□□□□ -0.77
Sf3b6P59708 Dclk3-201ENSMUST00000111879 3005 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Sf3b6P59708 Pofut1-201ENSMUST00000049863 5600 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Sf3b6P59708 Vmn1r16-203ENSMUST00000228356 3492 ntAPPRIS ALT2 BASIC10.21□□□□□ -0.77
Sf3b6P59708 Cux1-204ENSMUST00000175975 10945 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.77
Sf3b6P59708 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.77
Sf3b6P59708 Gm15074-201ENSMUST00000117603 936 ntBASIC10.21□□□□□ -0.77
Sf3b6P59708 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Sf3b6P59708 Gm11500-201ENSMUST00000118237 601 ntBASIC10.21□□□□□ -0.77
Sf3b6P59708 Gm15004-201ENSMUST00000119192 630 ntBASIC10.21□□□□□ -0.77
Sf3b6P59708 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC10.21□□□□□ -0.77
Sf3b6P59708 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC10.21□□□□□ -0.77
Sf3b6P59708 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Sf3b6P59708 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Sf3b6P59708 Mir8109-201ENSMUST00000184375 117 ntBASIC10.21□□□□□ -0.77
Sf3b6P59708 Mir6420-201ENSMUST00000185032 102 ntBASIC10.21□□□□□ -0.77
Sf3b6P59708 Gm28707-201ENSMUST00000186134 558 ntTSL 3 BASIC10.21□□□□□ -0.77
Sf3b6P59708 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC10.21□□□□□ -0.77
Sf3b6P59708 Gm28345-201ENSMUST00000188769 1139 ntTSL 5 BASIC10.21□□□□□ -0.77
Sf3b6P59708 Gm28970-201ENSMUST00000191098 1139 ntTSL 5 BASIC10.21□□□□□ -0.77
Sf3b6P59708 Gm38341-201ENSMUST00000195357 515 ntBASIC10.21□□□□□ -0.77
Sf3b6P59708 4930477O15Rik-201ENSMUST00000196484 1089 ntBASIC10.21□□□□□ -0.77
Sf3b6P59708 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC10.21□□□□□ -0.77
Sf3b6P59708 Gm7783-201ENSMUST00000204795 781 ntBASIC10.21□□□□□ -0.77
Sf3b6P59708 Gm45865-201ENSMUST00000211815 945 ntBASIC10.21□□□□□ -0.77
Sf3b6P59708 Gm18515-201ENSMUST00000219755 797 ntBASIC10.21□□□□□ -0.77
Sf3b6P59708 AC163354.1-207ENSMUST00000221270 1243 ntTSL 5 BASIC10.21□□□□□ -0.77
Sf3b6P59708 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC10.21□□□□□ -0.77
Sf3b6P59708 Cts7-204ENSMUST00000225321 1257 ntBASIC10.21□□□□□ -0.77
Sf3b6P59708 AC113031.8-201ENSMUST00000227856 631 ntBASIC10.21□□□□□ -0.77
Sf3b6P59708 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.77
Sf3b6P59708 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.77
Sf3b6P59708 Elfn1-201ENSMUST00000050519 3832 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Sf3b6P59708 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Sf3b6P59708 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC10.21□□□□□ -0.77
Sf3b6P59708 Baiap3-206ENSMUST00000182825 3862 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.78
Sf3b6P59708 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC10.21□□□□□ -0.78
Sf3b6P59708 Ikbkb-202ENSMUST00000063401 3977 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Sf3b6P59708 Ntrk3-205ENSMUST00000193002 2678 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.78
Sf3b6P59708 Abi1-204ENSMUST00000114544 2790 ntAPPRIS ALT1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Sf3b6P59708 Rnf20-210ENSMUST00000167496 4312 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Sf3b6P59708 Gm4864-201ENSMUST00000219894 1461 ntBASIC10.21□□□□□ -0.78
Sf3b6P59708 Bbs2-201ENSMUST00000034206 3064 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Sf3b6P59708 Sox5os1-201ENSMUST00000156994 1585 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Sf3b6P59708 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC10.21□□□□□ -0.78
Sf3b6P59708 Psd3-213ENSMUST00000212505 3253 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.78
Sf3b6P59708 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC10.21□□□□□ -0.78
Sf3b6P59708 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Sf3b6P59708 Rab14-202ENSMUST00000113025 4346 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Sf3b6P59708 Lcorl-205ENSMUST00000121573 2378 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Sf3b6P59708 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.78
Sf3b6P59708 Gm12799-201ENSMUST00000118151 2560 ntBASIC10.21□□□□□ -0.78
Sf3b6P59708 Ighg2b-202ENSMUST00000192188 2566 ntAPPRIS P5 BASIC10.21□□□□□ -0.78
Sf3b6P59708 L3mbtl1-201ENSMUST00000035751 2724 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
Sf3b6P59708 Smok3a-201ENSMUST00000085886 2723 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Sf3b6P59708 2410002F23Rik-204ENSMUST00000107948 2908 ntAPPRIS P2 TSL 2 BASIC10.2□□□□□ -0.78
Sf3b6P59708 Zfp114-203ENSMUST00000206547 3154 ntAPPRIS P2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Sf3b6P59708 Vrtn-203ENSMUST00000167227 3440 ntAPPRIS P1 TSL 3 BASIC10.2□□□□□ -0.78
Sf3b6P59708 Tspan18-202ENSMUST00000111265 3751 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
Sf3b6P59708 Kbtbd12-202ENSMUST00000120933 4644 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
Sf3b6P59708 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Sf3b6P59708 Epn3-202ENSMUST00000127305 3884 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Sf3b6P59708 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC10.2□□□□□ -0.78
Sf3b6P59708 Tcof1-204ENSMUST00000176630 4529 ntAPPRIS P3 TSL 5 BASIC10.2□□□□□ -0.78
Sf3b6P59708 Bco1-203ENSMUST00000176860 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Sf3b6P59708 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Sf3b6P59708 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC10.2□□□□□ -0.78
Sf3b6P59708 Gm27320-201ENSMUST00000184892 109 ntBASIC10.2□□□□□ -0.78
Sf3b6P59708 Gm18351-201ENSMUST00000188646 883 ntBASIC10.2□□□□□ -0.78
Sf3b6P59708 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC10.2□□□□□ -0.78
Sf3b6P59708 Gm18210-201ENSMUST00000209001 1524 ntBASIC10.2□□□□□ -0.78
Sf3b6P59708 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC10.2□□□□□ -0.78
Sf3b6P59708 G630064G18Rik-201ENSMUST00000209814 1795 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Sf3b6P59708 AC171277.1-201ENSMUST00000216902 1441 ntBASIC10.2□□□□□ -0.78
Sf3b6P59708 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC10.2□□□□□ -0.78
Sf3b6P59708 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC10.2□□□□□ -0.78
Sf3b6P59708 Clp1-201ENSMUST00000028475 1912 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Sf3b6P59708 Cdk5rap1-201ENSMUST00000028990 1970 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Sf3b6P59708 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Sf3b6P59708 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Sf3b6P59708 Xpc-201ENSMUST00000032182 3634 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Sf3b6P59708 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Sf3b6P59708 Ppp1r17-201ENSMUST00000052827 1757 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Sf3b6P59708 Fam120b-201ENSMUST00000055352 4518 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Sf3b6P59708 Prx-201ENSMUST00000065487 4497 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Sf3b6P59708 Slc25a51-202ENSMUST00000116341 4438 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Sf3b6P59708 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC10.2□□□□□ -0.78
Sf3b6P59708 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC10.2□□□□□ -0.78
Sf3b6P59708 Cep76-201ENSMUST00000097542 3979 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 52.1 ms