Protein–RNA interactions for Protein: P52955

Lbx1, Transcription factor LBX1, mousemouse

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lbx1P52955 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Lbx1P52955 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC11.18□□□□□ -0.62
Lbx1P52955 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Lbx1P52955 S1pr2-201ENSMUST00000054197 6394 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Lbx1P52955 Gm7061-201ENSMUST00000118127 1416 ntBASIC11.18□□□□□ -0.62
Lbx1P52955 Gm13608-201ENSMUST00000121807 1406 ntBASIC11.18□□□□□ -0.62
Lbx1P52955 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Lbx1P52955 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Lbx1P52955 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Lbx1P52955 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Lbx1P52955 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Lbx1P52955 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Lbx1P52955 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Lbx1P52955 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Lbx1P52955 Gm9415-201ENSMUST00000200462 1321 ntBASIC11.17□□□□□ -0.62
Lbx1P52955 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Lbx1P52955 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Lbx1P52955 Zc3hc1-201ENSMUST00000080812 1824 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Lbx1P52955 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Lbx1P52955 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Lbx1P52955 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Lbx1P52955 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Lbx1P52955 Wfdc2-203ENSMUST00000109345 558 ntAPPRIS ALT2 TSL 3 BASIC11.17□□□□□ -0.62
Lbx1P52955 Cryzl1-202ENSMUST00000114023 1154 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Lbx1P52955 Mtcp1-202ENSMUST00000114081 980 ntAPPRIS P1 TSL 2 BASIC11.17□□□□□ -0.62
Lbx1P52955 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Lbx1P52955 Gm15373-201ENSMUST00000121495 214 ntBASIC11.17□□□□□ -0.62
Lbx1P52955 Cryzl1-206ENSMUST00000124282 1187 ntTSL 5 BASIC11.17□□□□□ -0.62
Lbx1P52955 Gm15287-201ENSMUST00000132564 751 ntTSL 2 BASIC11.17□□□□□ -0.62
Lbx1P52955 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC11.17□□□□□ -0.62
Lbx1P52955 9430093N23Rik-201ENSMUST00000152494 515 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Lbx1P52955 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC11.17□□□□□ -0.62
Lbx1P52955 Gm16280-201ENSMUST00000162458 623 ntTSL 3 BASIC11.17□□□□□ -0.62
Lbx1P52955 Mir3100-201ENSMUST00000174918 65 ntBASIC11.17□□□□□ -0.62
Lbx1P52955 Gm26119-201ENSMUST00000175601 104 ntBASIC11.17□□□□□ -0.62
Lbx1P52955 Gm9578-201ENSMUST00000182354 753 ntBASIC11.17□□□□□ -0.62
Lbx1P52955 1700109G14Rik-202ENSMUST00000188538 754 ntTSL 3 BASIC11.17□□□□□ -0.62
Lbx1P52955 Gm26901-204ENSMUST00000193732 631 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Lbx1P52955 AC166902.2-202ENSMUST00000213191 1038 ntTSL 5 BASIC11.17□□□□□ -0.62
Lbx1P52955 Gm18164-201ENSMUST00000213769 927 ntBASIC11.17□□□□□ -0.62
Lbx1P52955 Gm18166-201ENSMUST00000215557 927 ntBASIC11.17□□□□□ -0.62
Lbx1P52955 Fxyd1-201ENSMUST00000039909 620 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Lbx1P52955 1700069L16Rik-201ENSMUST00000047891 537 ntAPPRIS P5 TSL 2 BASIC11.17□□□□□ -0.62
Lbx1P52955 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Lbx1P52955 Gm5278-201ENSMUST00000055957 552 ntBASIC11.17□□□□□ -0.62
Lbx1P52955 Gm8730-201ENSMUST00000076373 954 ntBASIC11.17□□□□□ -0.62
Lbx1P52955 Krtap4-1-201ENSMUST00000081007 1015 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Lbx1P52955 Gm10228-201ENSMUST00000089105 532 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Lbx1P52955 Ctxn2-201ENSMUST00000099452 1028 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Lbx1P52955 AC126257.1-201ENSMUST00000213195 1536 ntBASIC11.17□□□□□ -0.62
Lbx1P52955 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Lbx1P52955 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Lbx1P52955 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Lbx1P52955 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC11.17□□□□□ -0.62
Lbx1P52955 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Lbx1P52955 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Lbx1P52955 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Lbx1P52955 1700092E19Rik-202ENSMUST00000154703 1650 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Lbx1P52955 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Lbx1P52955 Cdc42-202ENSMUST00000051477 2108 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Lbx1P52955 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC11.17□□□□□ -0.62
Lbx1P52955 AC129931.1-201ENSMUST00000228865 1861 ntBASIC11.17□□□□□ -0.62
Lbx1P52955 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Lbx1P52955 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Lbx1P52955 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Lbx1P52955 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Lbx1P52955 Smap1-202ENSMUST00000129254 1365 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Lbx1P52955 2700038G22Rik-201ENSMUST00000181574 1375 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Lbx1P52955 4930433J02Rik-201ENSMUST00000194719 1386 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Lbx1P52955 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Lbx1P52955 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Lbx1P52955 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Lbx1P52955 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Lbx1P52955 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Lbx1P52955 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Lbx1P52955 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Lbx1P52955 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Lbx1P52955 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Lbx1P52955 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Lbx1P52955 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Lbx1P52955 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Lbx1P52955 Gm13002-201ENSMUST00000119286 682 ntBASIC11.16□□□□□ -0.62
Lbx1P52955 Gm6939-201ENSMUST00000122029 864 ntBASIC11.16□□□□□ -0.62
Lbx1P52955 1700095J12Rik-201ENSMUST00000124620 737 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Lbx1P52955 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Lbx1P52955 Gm11417-201ENSMUST00000150536 920 ntTSL 2 BASIC11.16□□□□□ -0.62
Lbx1P52955 Gm13412-201ENSMUST00000150621 677 ntTSL 3 BASIC11.16□□□□□ -0.62
Lbx1P52955 Gm16080-201ENSMUST00000152128 692 ntTSL 3 BASIC11.16□□□□□ -0.62
Lbx1P52955 Gm4982-201ENSMUST00000160440 1098 ntBASIC11.16□□□□□ -0.62
Lbx1P52955 Gm3898-201ENSMUST00000180221 613 ntTSL 5 BASIC11.16□□□□□ -0.62
Lbx1P52955 Gm26943-201ENSMUST00000182295 957 ntBASIC11.16□□□□□ -0.62
Lbx1P52955 Ints5-203ENSMUST00000191089 568 ntTSL 5 BASIC11.16□□□□□ -0.62
Lbx1P52955 Gm37858-201ENSMUST00000192759 1231 ntBASIC11.16□□□□□ -0.62
Lbx1P52955 Gm38301-201ENSMUST00000195573 543 ntBASIC11.16□□□□□ -0.62
Lbx1P52955 Gm42689-201ENSMUST00000202403 404 ntBASIC11.16□□□□□ -0.62
Lbx1P52955 Gm44917-201ENSMUST00000208798 520 ntBASIC11.16□□□□□ -0.62
Lbx1P52955 Nudc-ps1-201ENSMUST00000209275 551 ntBASIC11.16□□□□□ -0.62
Lbx1P52955 Madcam1-202ENSMUST00000217748 944 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Lbx1P52955 AC107711.4-201ENSMUST00000228948 440 ntBASIC11.16□□□□□ -0.62
Lbx1P52955 Tdpoz3-201ENSMUST00000081780 1098 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 49.1 ms