Protein–RNA interactions for Protein: P50405

Sftpb, Pulmonary surfactant-associated protein B, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SftpbP50405 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC11.71□□□□□ -0.53
SftpbP50405 Gm5616-201ENSMUST00000165252 384 ntBASIC11.71□□□□□ -0.53
SftpbP50405 Gm8741-201ENSMUST00000174736 384 ntBASIC11.71□□□□□ -0.53
SftpbP50405 Gm43184-201ENSMUST00000197247 542 ntBASIC11.71□□□□□ -0.53
SftpbP50405 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC11.71□□□□□ -0.53
SftpbP50405 Gm43822-201ENSMUST00000200285 476 ntBASIC11.71□□□□□ -0.53
SftpbP50405 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC11.71□□□□□ -0.53
SftpbP50405 Gm43966-201ENSMUST00000203301 612 ntBASIC11.71□□□□□ -0.53
SftpbP50405 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC11.71□□□□□ -0.53
SftpbP50405 Gm7940-201ENSMUST00000218195 769 ntBASIC11.71□□□□□ -0.53
SftpbP50405 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
SftpbP50405 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
SftpbP50405 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
SftpbP50405 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
SftpbP50405 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
SftpbP50405 Cyp11b1-201ENSMUST00000170259 3165 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
SftpbP50405 Bcar1-203ENSMUST00000212349 3116 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
SftpbP50405 Zfp236-202ENSMUST00000182122 6059 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
SftpbP50405 Asl-203ENSMUST00000160129 2413 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.54
SftpbP50405 Calcoco1-204ENSMUST00000171838 2968 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
SftpbP50405 Tube1-201ENSMUST00000019991 2929 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
SftpbP50405 Pck2-207ENSMUST00000226519 4625 ntAPPRIS P1 BASIC11.71□□□□□ -0.54
SftpbP50405 Arntl2-202ENSMUST00000111636 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
SftpbP50405 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
SftpbP50405 Anp32e-204ENSMUST00000168106 2890 ntTSL 5 BASIC11.71□□□□□ -0.54
SftpbP50405 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.54
SftpbP50405 Kcns2-202ENSMUST00000228725 4906 ntAPPRIS P1 BASIC11.71□□□□□ -0.54
SftpbP50405 Dcun1d2-201ENSMUST00000045366 2748 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
SftpbP50405 Usp5-201ENSMUST00000047510 3213 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.54
SftpbP50405 Gm37122-201ENSMUST00000195313 1567 ntBASIC11.71□□□□□ -0.54
SftpbP50405 Best1-201ENSMUST00000117346 2080 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.54
SftpbP50405 Lhx9-205ENSMUST00000112030 4633 ntTSL 5 BASIC11.71□□□□□ -0.54
SftpbP50405 Slc43a1-204ENSMUST00000121114 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
SftpbP50405 Gm45199-201ENSMUST00000207640 1507 ntBASIC11.7□□□□□ -0.54
SftpbP50405 Gm9072-201ENSMUST00000218390 1514 ntBASIC11.7□□□□□ -0.54
SftpbP50405 Arhgef4-204ENSMUST00000159747 6514 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
SftpbP50405 Tbrg1-201ENSMUST00000117654 1984 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
SftpbP50405 Esco1-201ENSMUST00000025142 4433 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
SftpbP50405 Wbp1l-204ENSMUST00000138302 3900 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
SftpbP50405 Unkl-201ENSMUST00000015271 3414 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
SftpbP50405 Ddx54-201ENSMUST00000031598 4322 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
SftpbP50405 Pip5k1b-202ENSMUST00000112673 2387 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
SftpbP50405 AC167565.1-201ENSMUST00000226980 1833 ntBASIC11.7□□□□□ -0.54
SftpbP50405 Pdzk1-203ENSMUST00000107070 2711 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
SftpbP50405 Igsf1-204ENSMUST00000114893 2671 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
SftpbP50405 Megf8-201ENSMUST00000128119 10040 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
SftpbP50405 Stkld1-201ENSMUST00000055406 2169 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
SftpbP50405 Zfp558-202ENSMUST00000034647 1701 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
SftpbP50405 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
SftpbP50405 Gm4760-201ENSMUST00000119663 1030 ntBASIC11.7□□□□□ -0.54
SftpbP50405 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
SftpbP50405 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
SftpbP50405 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC11.7□□□□□ -0.54
SftpbP50405 Gm8343-201ENSMUST00000182705 994 ntBASIC11.7□□□□□ -0.54
SftpbP50405 Gm29615-201ENSMUST00000185371 697 ntBASIC11.7□□□□□ -0.54
SftpbP50405 Gm28224-201ENSMUST00000186078 697 ntBASIC11.7□□□□□ -0.54
SftpbP50405 Gm29001-201ENSMUST00000186177 697 ntBASIC11.7□□□□□ -0.54
SftpbP50405 Gm28292-201ENSMUST00000186593 697 ntBASIC11.7□□□□□ -0.54
SftpbP50405 Gm28101-201ENSMUST00000187608 697 ntBASIC11.7□□□□□ -0.54
SftpbP50405 Gm29076-201ENSMUST00000187689 697 ntBASIC11.7□□□□□ -0.54
SftpbP50405 Gm28302-201ENSMUST00000187931 697 ntBASIC11.7□□□□□ -0.54
SftpbP50405 Gm28646-201ENSMUST00000188220 697 ntBASIC11.7□□□□□ -0.54
SftpbP50405 Gm28205-201ENSMUST00000189177 697 ntBASIC11.7□□□□□ -0.54
SftpbP50405 Gm29032-201ENSMUST00000189797 697 ntBASIC11.7□□□□□ -0.54
SftpbP50405 Gm28695-201ENSMUST00000190300 697 ntBASIC11.7□□□□□ -0.54
SftpbP50405 Gm37448-201ENSMUST00000192795 697 ntBASIC11.7□□□□□ -0.54
SftpbP50405 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC11.7□□□□□ -0.54
SftpbP50405 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC11.7□□□□□ -0.54
SftpbP50405 AC113082.1-201ENSMUST00000217324 327 ntBASIC11.7□□□□□ -0.54
SftpbP50405 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
SftpbP50405 Crot-201ENSMUST00000003720 2996 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
SftpbP50405 Ehbp1-202ENSMUST00000109563 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
SftpbP50405 Foxd2os-201ENSMUST00000123272 2908 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
SftpbP50405 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
SftpbP50405 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC11.7□□□□□ -0.54
SftpbP50405 Synpo2l-201ENSMUST00000057090 4394 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
SftpbP50405 Srsf6-203ENSMUST00000130411 3527 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
SftpbP50405 Cdc7-204ENSMUST00000118261 3129 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
SftpbP50405 Ndufa11-201ENSMUST00000002452 2661 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
SftpbP50405 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
SftpbP50405 Prdx2-201ENSMUST00000005292 1500 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
SftpbP50405 Cdc42ep4-202ENSMUST00000106616 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
SftpbP50405 Srrt-201ENSMUST00000040873 3024 ntAPPRIS P3 TSL 5 BASIC11.7□□□□□ -0.54
SftpbP50405 Tnip1-203ENSMUST00000102731 2973 ntAPPRIS P3 TSL 5 BASIC11.7□□□□□ -0.54
SftpbP50405 Man2b2-201ENSMUST00000031002 3330 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
SftpbP50405 Apol9a-201ENSMUST00000081776 1475 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
SftpbP50405 Gpr101-201ENSMUST00000057645 5410 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
SftpbP50405 9430015G10Rik-201ENSMUST00000072554 2528 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
SftpbP50405 Stc2-201ENSMUST00000020546 3940 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
SftpbP50405 Gm39168-201ENSMUST00000210181 1423 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
SftpbP50405 Camk2a-203ENSMUST00000102888 4970 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
SftpbP50405 Anxa6-201ENSMUST00000102727 2471 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
SftpbP50405 Gm10803-201ENSMUST00000099692 2483 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
SftpbP50405 Gm44663-201ENSMUST00000206898 3150 ntBASIC11.69□□□□□ -0.54
SftpbP50405 Eps8l1-204ENSMUST00000163893 3868 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
SftpbP50405 Chrng-201ENSMUST00000027470 2780 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
SftpbP50405 Gm15958-202ENSMUST00000153479 2087 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
SftpbP50405 4930519G04Rik-201ENSMUST00000031547 2092 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
SftpbP50405 Platr25-207ENSMUST00000222477 1705 ntTSL 5 BASIC11.69□□□□□ -0.54
SftpbP50405 Nmt2-201ENSMUST00000081932 4461 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms