Protein–RNA interactions for Protein: P48678

Lmna, Prelamin-A/C, mousemouse

Known RBP Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LmnaP48678 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC12.12□□□□□ -0.47
LmnaP48678 Rwdd2a-202ENSMUST00000179212 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
LmnaP48678 Gm26693-201ENSMUST00000181318 1021 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
LmnaP48678 Gm8100-201ENSMUST00000182906 988 ntBASIC12.12□□□□□ -0.47
LmnaP48678 1700065O20Rik-201ENSMUST00000186872 710 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
LmnaP48678 1700066B17Rik-203ENSMUST00000191299 536 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
LmnaP48678 8030442B05Rik-201ENSMUST00000192626 1035 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
LmnaP48678 Gm31831-201ENSMUST00000196240 684 ntTSL 3 BASIC12.12□□□□□ -0.47
LmnaP48678 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
LmnaP48678 Gm6781-201ENSMUST00000038304 1242 ntBASIC12.12□□□□□ -0.47
LmnaP48678 Hopx-201ENSMUST00000081964 1261 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
LmnaP48678 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
LmnaP48678 n-R5s211-201ENSMUST00000093689 119 ntBASIC12.12□□□□□ -0.47
LmnaP48678 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
LmnaP48678 Actg-ps1-201ENSMUST00000099636 1124 ntBASIC12.12□□□□□ -0.47
LmnaP48678 Rab14-201ENSMUST00000028238 3081 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
LmnaP48678 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
LmnaP48678 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
LmnaP48678 Igsf9-201ENSMUST00000052629 4133 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
LmnaP48678 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
LmnaP48678 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
LmnaP48678 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
LmnaP48678 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
LmnaP48678 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC12.12□□□□□ -0.47
LmnaP48678 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
LmnaP48678 Nexmif-202ENSMUST00000087879 10891 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
LmnaP48678 Rbm6-207ENSMUST00000183032 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
LmnaP48678 Pspc1-201ENSMUST00000022507 4114 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
LmnaP48678 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
LmnaP48678 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
LmnaP48678 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
LmnaP48678 Plg-201ENSMUST00000014578 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
LmnaP48678 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
LmnaP48678 Vmn1r193-202ENSMUST00000227457 6429 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
LmnaP48678 Gm21998-201ENSMUST00000117552 1308 ntBASIC12.11□□□□□ -0.47
LmnaP48678 Efcab14-203ENSMUST00000106524 1544 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
LmnaP48678 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
LmnaP48678 Gm18262-201ENSMUST00000222560 1946 ntBASIC12.11□□□□□ -0.47
LmnaP48678 Gm43622-201ENSMUST00000200140 2019 ntBASIC12.11□□□□□ -0.47
LmnaP48678 Mrpl45-201ENSMUST00000019026 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
LmnaP48678 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
LmnaP48678 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
LmnaP48678 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
LmnaP48678 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
LmnaP48678 Ssh1-201ENSMUST00000077689 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
LmnaP48678 Pcgf3-201ENSMUST00000046975 7708 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
LmnaP48678 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
LmnaP48678 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
LmnaP48678 Neurod6-201ENSMUST00000044767 2150 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
LmnaP48678 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
LmnaP48678 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
LmnaP48678 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
LmnaP48678 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
LmnaP48678 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
LmnaP48678 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
LmnaP48678 Rbm3-205ENSMUST00000115619 969 ntAPPRIS ALT1 TSL 3 BASIC12.11□□□□□ -0.47
LmnaP48678 Gm25318-201ENSMUST00000122554 314 ntBASIC12.11□□□□□ -0.47
LmnaP48678 Gm15523-201ENSMUST00000160463 439 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
LmnaP48678 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
LmnaP48678 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC12.11□□□□□ -0.47
LmnaP48678 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
LmnaP48678 1700088E04Rik-203ENSMUST00000186053 535 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
LmnaP48678 Ighv1-48-201ENSMUST00000191795 294 ntBASIC12.11□□□□□ -0.47
LmnaP48678 Gm43184-201ENSMUST00000197247 542 ntBASIC12.11□□□□□ -0.47
LmnaP48678 AC154252.2-201ENSMUST00000223593 767 ntBASIC12.11□□□□□ -0.47
LmnaP48678 Pgpep1l-201ENSMUST00000032770 953 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
LmnaP48678 Prss51-201ENSMUST00000063785 961 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
LmnaP48678 Gm9962-201ENSMUST00000085241 321 ntTSL 5 BASIC12.11□□□□□ -0.47
LmnaP48678 Nat8f6-201ENSMUST00000087656 925 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
LmnaP48678 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC12.11□□□□□ -0.47
LmnaP48678 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
LmnaP48678 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
LmnaP48678 Gm34425-201ENSMUST00000216269 3079 ntTSL 5 BASIC12.11□□□□□ -0.47
LmnaP48678 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC12.11□□□□□ -0.47
LmnaP48678 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
LmnaP48678 Drg1-201ENSMUST00000020741 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
LmnaP48678 Trpm7-202ENSMUST00000103224 7107 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
LmnaP48678 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
LmnaP48678 Pcdhga4-201ENSMUST00000194418 4727 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
LmnaP48678 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC12.1□□□□□ -0.47
LmnaP48678 Ube2q2-203ENSMUST00000122441 2081 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
LmnaP48678 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC12.1□□□□□ -0.47
LmnaP48678 Ecsit-204ENSMUST00000180180 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
LmnaP48678 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
LmnaP48678 Cep128-210ENSMUST00000141429 4807 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
LmnaP48678 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
LmnaP48678 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC12.1□□□□□ -0.47
LmnaP48678 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
LmnaP48678 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC12.1□□□□□ -0.47
LmnaP48678 Asb11-201ENSMUST00000033755 1369 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
LmnaP48678 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
LmnaP48678 Nppa-201ENSMUST00000103230 865 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
LmnaP48678 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC12.1□□□□□ -0.47
LmnaP48678 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
LmnaP48678 Gm22144-201ENSMUST00000157402 102 ntBASIC12.1□□□□□ -0.47
LmnaP48678 Gm16271-201ENSMUST00000162837 220 ntTSL 5 BASIC12.1□□□□□ -0.47
LmnaP48678 Gm4862-201ENSMUST00000170405 438 ntBASIC12.1□□□□□ -0.47
LmnaP48678 Smlr1-201ENSMUST00000179685 669 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
LmnaP48678 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC12.1□□□□□ -0.47
LmnaP48678 Gm3332-201ENSMUST00000189337 928 ntBASIC12.1□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms