Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Olfr333-ps1-201ENSMUST00000122311 940 ntBASIC11.8□□□□□ -0.52
HttP42859 Gm13709-201ENSMUST00000138573 614 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
HttP42859 Ighv6-4-201ENSMUST00000177949 297 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
HttP42859 4933436E23Rik-201ENSMUST00000192824 1111 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
HttP42859 Gm33080-201ENSMUST00000205429 172 ntBASIC11.8□□□□□ -0.52
HttP42859 Gimd1-205ENSMUST00000212852 1234 ntTSL 5 BASIC11.8□□□□□ -0.52
HttP42859 Gm35412-201ENSMUST00000220437 999 ntBASIC11.8□□□□□ -0.52
HttP42859 AC122356.2-201ENSMUST00000226962 820 ntBASIC11.8□□□□□ -0.52
HttP42859 Mettl7b-201ENSMUST00000026398 1230 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
HttP42859 Cst13-201ENSMUST00000046589 783 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
HttP42859 Myc-204ENSMUST00000160009 1765 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
HttP42859 Gm45428-201ENSMUST00000209619 1789 ntBASIC11.8□□□□□ -0.52
HttP42859 Ccser2-203ENSMUST00000182042 1420 ntTSL 5 BASIC11.8□□□□□ -0.52
HttP42859 Ttll10-206ENSMUST00000184348 2556 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
HttP42859 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC11.8□□□□□ -0.52
HttP42859 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
HttP42859 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
HttP42859 Treml4-201ENSMUST00000059873 1744 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
HttP42859 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
HttP42859 AC125108.1-201ENSMUST00000218986 2330 ntBASIC11.8□□□□□ -0.52
HttP42859 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
HttP42859 Gm12420-201ENSMUST00000119869 1048 ntBASIC11.8□□□□□ -0.52
HttP42859 Gm24346-201ENSMUST00000158712 194 ntBASIC11.8□□□□□ -0.52
HttP42859 Gm27200-201ENSMUST00000184626 657 ntTSL 3 BASIC11.8□□□□□ -0.52
HttP42859 Tcstv1-202ENSMUST00000190512 875 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
HttP42859 Gm9353-201ENSMUST00000200472 604 ntBASIC11.8□□□□□ -0.52
HttP42859 Olfr456-201ENSMUST00000057251 1052 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
HttP42859 Gm31938-201ENSMUST00000218081 1818 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
HttP42859 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
HttP42859 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
HttP42859 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
HttP42859 Syna-201ENSMUST00000149604 2026 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
HttP42859 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
HttP42859 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC11.79□□□□□ -0.52
HttP42859 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
HttP42859 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
HttP42859 Cnga4-202ENSMUST00000210344 1977 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
HttP42859 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
HttP42859 Gm16169-202ENSMUST00000162432 2128 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
HttP42859 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
HttP42859 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
HttP42859 Atp1a3-201ENSMUST00000080882 3621 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
HttP42859 A930003A15Rik-201ENSMUST00000100083 746 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
HttP42859 Gm12481-201ENSMUST00000102482 297 ntBASIC11.79□□□□□ -0.52
HttP42859 Eya2-201ENSMUST00000063433 2460 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
HttP42859 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
HttP42859 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
HttP42859 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC11.79□□□□□ -0.52
HttP42859 Mak16-201ENSMUST00000033983 1902 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
HttP42859 Snx29-201ENSMUST00000096273 1622 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
HttP42859 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC11.79□□□□□ -0.52
HttP42859 Mir9-3hg-202ENSMUST00000181511 3412 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
HttP42859 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
HttP42859 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
HttP42859 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC11.79□□□□□ -0.52
HttP42859 Prdm5-204ENSMUST00000172638 1714 ntTSL 5 BASIC11.79□□□□□ -0.52
HttP42859 Gm11569-201ENSMUST00000105057 869 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
HttP42859 Bglap3-203ENSMUST00000107543 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
HttP42859 Gm24597-201ENSMUST00000122503 300 ntBASIC11.79□□□□□ -0.52
HttP42859 D430040D24Rik-201ENSMUST00000149224 910 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
HttP42859 Vmn2r-ps54-203ENSMUST00000150856 1142 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
HttP42859 1010001N08Rik-202ENSMUST00000181316 728 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
HttP42859 Gm5274-201ENSMUST00000182641 1003 ntBASIC11.79□□□□□ -0.52
HttP42859 Pea15b-202ENSMUST00000183185 555 ntBASIC11.79□□□□□ -0.52
HttP42859 Gm29164-201ENSMUST00000185454 1024 ntBASIC11.79□□□□□ -0.52
HttP42859 Olfr139-203ENSMUST00000206280 1059 ntAPPRIS P1 TSL 3 BASIC11.79□□□□□ -0.52
HttP42859 Gm3198-201ENSMUST00000208725 1026 ntBASIC11.79□□□□□ -0.52
HttP42859 Gm24146-201ENSMUST00000082760 321 ntBASIC11.79□□□□□ -0.52
HttP42859 Esp6-201ENSMUST00000097324 658 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
HttP42859 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC11.79□□□□□ -0.52
HttP42859 Uqcc1-203ENSMUST00000109632 2313 ntTSL 5 BASIC11.79□□□□□ -0.52
HttP42859 Ssr1-203ENSMUST00000225246 1825 ntBASIC11.79□□□□□ -0.52
HttP42859 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
HttP42859 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
HttP42859 Lck-208ENSMUST00000167288 2074 ntTSL 5 BASIC11.79□□□□□ -0.52
HttP42859 Gm32828-202ENSMUST00000219198 2111 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
HttP42859 Sertm1-202ENSMUST00000162201 2899 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
HttP42859 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC11.78□□□□□ -0.52
HttP42859 Gm42467-201ENSMUST00000202954 1447 ntBASIC11.78□□□□□ -0.52
HttP42859 Hsh2d-201ENSMUST00000072097 1824 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
HttP42859 Gm8864-201ENSMUST00000118653 1010 ntBASIC11.78□□□□□ -0.52
HttP42859 Gm13465-201ENSMUST00000129687 979 ntTSL 2 BASIC11.78□□□□□ -0.52
HttP42859 Stk33-205ENSMUST00000141210 949 ntTSL 3 BASIC11.78□□□□□ -0.52
HttP42859 Gm7539-201ENSMUST00000189789 630 ntBASIC11.78□□□□□ -0.52
HttP42859 Snrp1c-ps1-201ENSMUST00000205464 474 ntBASIC11.78□□□□□ -0.52
HttP42859 Gm32772-203ENSMUST00000207022 675 ntTSL 3 BASIC11.78□□□□□ -0.52
HttP42859 Gm31135-202ENSMUST00000208946 1155 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
HttP42859 AC166061.1-201ENSMUST00000225163 1138 ntBASIC11.78□□□□□ -0.52
HttP42859 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
HttP42859 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
HttP42859 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC11.78□□□□□ -0.52
HttP42859 AU015228-201ENSMUST00000121103 1320 ntBASIC11.78□□□□□ -0.52
HttP42859 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
HttP42859 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
HttP42859 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
HttP42859 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
HttP42859 Gast-201ENSMUST00000017309 460 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
HttP42859 D330041H03Rik-202ENSMUST00000180390 411 ntTSL 2 BASIC11.78□□□□□ -0.52
HttP42859 Gm20281-201ENSMUST00000188225 267 ntBASIC11.78□□□□□ -0.52
HttP42859 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 67.3 ms