Protein–RNA interactions for Protein: P40338

Vhl, von Hippel-Lindau disease tumor suppressor, mousemouse

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VhlP40338 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
VhlP40338 Tmc5-202ENSMUST00000098088 3774 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
VhlP40338 Hap1-202ENSMUST00000138603 3316 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
VhlP40338 Brat1-201ENSMUST00000041588 3333 ntAPPRIS P3 TSL 1 (best) BASIC9.43□□□□□ -0.9
VhlP40338 Lvrn-201ENSMUST00000025358 3219 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
VhlP40338 Trpc6-203ENSMUST00000217462 3168 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
VhlP40338 Pak7-201ENSMUST00000035264 4848 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
VhlP40338 Gm2464-201ENSMUST00000180838 2551 ntTSL 5 BASIC9.43□□□□□ -0.9
VhlP40338 Fam234b-201ENSMUST00000111915 4221 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
VhlP40338 Dennd1c-201ENSMUST00000011623 2520 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
VhlP40338 Ptprr-206ENSMUST00000148731 2511 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
VhlP40338 Ddx11-201ENSMUST00000163605 4149 ntAPPRIS P2 TSL 5 BASIC9.43□□□□□ -0.9
VhlP40338 Gm26660-202ENSMUST00000223620 4112 ntBASIC9.43□□□□□ -0.9
VhlP40338 Dhx34-201ENSMUST00000094816 4073 ntAPPRIS P2 TSL 1 (best) BASIC9.43□□□□□ -0.9
VhlP40338 AC153380.1-201ENSMUST00000214959 2364 ntBASIC9.43□□□□□ -0.9
VhlP40338 Dll4-201ENSMUST00000102517 3747 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
VhlP40338 D130019J16Rik-201ENSMUST00000193261 2158 ntBASIC9.43□□□□□ -0.9
VhlP40338 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC9.43□□□□□ -0.9
VhlP40338 Tsc2-201ENSMUST00000097373 6018 ntAPPRIS P2 TSL 1 (best) BASIC9.43□□□□□ -0.9
VhlP40338 Tyw1-202ENSMUST00000044204 4698 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
VhlP40338 Faim2-201ENSMUST00000023750 4520 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
VhlP40338 Esco1-201ENSMUST00000025142 4433 ntAPPRIS P2 TSL 1 (best) BASIC9.42□□□□□ -0.9
VhlP40338 Fastkd5-201ENSMUST00000110262 3015 ntAPPRIS P1 TSL 2 BASIC9.42□□□□□ -0.9
VhlP40338 Gm807-201ENSMUST00000181742 1723 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
VhlP40338 AC173482.6-201ENSMUST00000225889 1741 ntBASIC9.42□□□□□ -0.9
VhlP40338 Dpt-201ENSMUST00000027861 1724 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
VhlP40338 Gatsl2-201ENSMUST00000016088 7367 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
VhlP40338 Cpt1c-201ENSMUST00000063761 2793 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
VhlP40338 Hyal1-202ENSMUST00000112387 2706 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
VhlP40338 Golga2-203ENSMUST00000113377 4361 ntAPPRIS ALT2 TSL 5 BASIC9.42□□□□□ -0.9
VhlP40338 Svop-201ENSMUST00000058472 3379 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
VhlP40338 Zdhhc21-201ENSMUST00000030110 8763 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
VhlP40338 CT010480.4-201ENSMUST00000224654 2283 ntBASIC9.42□□□□□ -0.9
VhlP40338 Spata2-201ENSMUST00000057627 4012 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
VhlP40338 Gm26286-201ENSMUST00000104166 134 ntBASIC9.42□□□□□ -0.9
VhlP40338 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC9.42□□□□□ -0.9
VhlP40338 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC9.42□□□□□ -0.9
VhlP40338 Gm5187-201ENSMUST00000117317 991 ntBASIC9.42□□□□□ -0.9
VhlP40338 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
VhlP40338 Gm12129-201ENSMUST00000120104 1147 ntBASIC9.42□□□□□ -0.9
VhlP40338 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC9.42□□□□□ -0.9
VhlP40338 1700037C06Rik-201ENSMUST00000132824 874 ntBASIC9.42□□□□□ -0.9
VhlP40338 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
VhlP40338 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC9.42□□□□□ -0.9
VhlP40338 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC9.42□□□□□ -0.9
VhlP40338 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
VhlP40338 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
VhlP40338 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC9.42□□□□□ -0.9
VhlP40338 Gm5982-201ENSMUST00000196234 512 ntBASIC9.42□□□□□ -0.9
VhlP40338 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC9.42□□□□□ -0.9
VhlP40338 Olfr1380-201ENSMUST00000204300 938 ntAPPRIS P1 BASIC9.42□□□□□ -0.9
VhlP40338 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
VhlP40338 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
VhlP40338 Gm5705-201ENSMUST00000066241 711 ntBASIC9.42□□□□□ -0.9
VhlP40338 Pla2g6-203ENSMUST00000172403 2943 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
VhlP40338 Derl2-206ENSMUST00000143850 3666 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
VhlP40338 Cinp-201ENSMUST00000043716 2029 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
VhlP40338 Cd6-202ENSMUST00000039043 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
VhlP40338 Iqce-201ENSMUST00000041783 6037 ntAPPRIS P3 TSL 1 (best) BASIC9.42□□□□□ -0.9
VhlP40338 Madd-206ENSMUST00000099725 5905 ntAPPRIS ALT2 TSL 5 BASIC9.42□□□□□ -0.9
VhlP40338 Eya2-201ENSMUST00000063433 2460 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
VhlP40338 Smtn-203ENSMUST00000075118 3117 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
VhlP40338 Gm18798-201ENSMUST00000187264 1700 ntBASIC9.42□□□□□ -0.9
VhlP40338 Uba1y-ps1-201ENSMUST00000188314 1708 ntBASIC9.42□□□□□ -0.9
VhlP40338 6030443J06Rik-201ENSMUST00000181209 2380 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
VhlP40338 Tmem19-201ENSMUST00000092170 3012 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
VhlP40338 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
VhlP40338 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC9.42□□□□□ -0.9
VhlP40338 Cdc20b-203ENSMUST00000181117 1608 ntAPPRIS ALT2 TSL 5 BASIC9.42□□□□□ -0.9
VhlP40338 Hif1an-201ENSMUST00000040455 6194 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
VhlP40338 Zcwpw1-201ENSMUST00000035852 2222 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
VhlP40338 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC9.41□□□□□ -0.9
VhlP40338 Prss57-203ENSMUST00000169684 2841 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
VhlP40338 Kcnh5-201ENSMUST00000042299 4058 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
VhlP40338 Madd-213ENSMUST00000111376 5927 ntAPPRIS ALT2 TSL 5 BASIC9.41□□□□□ -0.9
VhlP40338 Col6a3-202ENSMUST00000097653 9001 ntAPPRIS P1 TSL 5 BASIC9.41□□□□□ -0.9
VhlP40338 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC9.41□□□□□ -0.9
VhlP40338 5930430L01Rik-201ENSMUST00000145042 3994 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
VhlP40338 Slc10a6-201ENSMUST00000031263 2124 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
VhlP40338 Smarca2-216ENSMUST00000176769 5703 ntTSL 5 BASIC9.41□□□□□ -0.9
VhlP40338 Zmynd8-205ENSMUST00000109266 5072 ntAPPRIS P4 TSL 1 (best) BASIC9.41□□□□□ -0.9
VhlP40338 Tom1l2-204ENSMUST00000095254 4940 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
VhlP40338 Limd1-201ENSMUST00000026269 4848 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
VhlP40338 Fyb2-202ENSMUST00000106804 3068 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
VhlP40338 Kalrn-205ENSMUST00000114953 4722 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
VhlP40338 Mageb4-202ENSMUST00000113969 2403 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
VhlP40338 Mybph-202ENSMUST00000191577 2320 ntAPPRIS P1 TSL 5 BASIC9.41□□□□□ -0.9
VhlP40338 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC9.41□□□□□ -0.9
VhlP40338 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC9.41□□□□□ -0.9
VhlP40338 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
VhlP40338 Gm15547-201ENSMUST00000122152 333 ntBASIC9.41□□□□□ -0.9
VhlP40338 Gm14198-201ENSMUST00000153208 948 ntTSL 2 BASIC9.41□□□□□ -0.9
VhlP40338 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
VhlP40338 Gm8712-201ENSMUST00000221090 701 ntBASIC9.41□□□□□ -0.9
VhlP40338 Gm7046-201ENSMUST00000221351 977 ntBASIC9.41□□□□□ -0.9
VhlP40338 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
VhlP40338 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
VhlP40338 Olfr61-201ENSMUST00000084455 936 ntAPPRIS P1 BASIC9.41□□□□□ -0.9
VhlP40338 Azin1-203ENSMUST00000110329 4217 ntAPPRIS P1 TSL 2 BASIC9.41□□□□□ -0.9
VhlP40338 Hspa5-201ENSMUST00000028222 3672 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 49 ms