Protein–RNA interactions for Protein: P40240

Cd9, CD9 antigen, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd9P40240 Trmt2a-207ENSMUST00000140206 3520 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Cd9P40240 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Cd9P40240 Cars-202ENSMUST00000105909 2462 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cd9P40240 Fxr1-206ENSMUST00000198051 2127 ntTSL 5 BASIC11.33□□□□□ -0.6
Cd9P40240 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cd9P40240 Pax5-203ENSMUST00000107825 1445 ntTSL 5 BASIC11.33□□□□□ -0.6
Cd9P40240 BC043934-202ENSMUST00000185694 2356 ntBASIC11.33□□□□□ -0.6
Cd9P40240 AC153380.1-201ENSMUST00000214959 2364 ntBASIC11.33□□□□□ -0.6
Cd9P40240 Sec24d-201ENSMUST00000047923 3903 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cd9P40240 Mefv-202ENSMUST00000100222 3249 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cd9P40240 Adgre5-203ENSMUST00000109802 2867 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Cd9P40240 Slc2a4-201ENSMUST00000018710 2524 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cd9P40240 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cd9P40240 Mrpl45-201ENSMUST00000019026 2431 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cd9P40240 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Cd9P40240 Fcho1-201ENSMUST00000093444 3073 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Cd9P40240 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cd9P40240 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Cd9P40240 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cd9P40240 Celf3-213ENSMUST00000199775 2351 ntAPPRIS ALT1 TSL 5 BASIC11.32□□□□□ -0.6
Cd9P40240 Zdhhc6-205ENSMUST00000224291 2603 ntBASIC11.32□□□□□ -0.6
Cd9P40240 Zfp957-201ENSMUST00000040802 2613 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cd9P40240 Rad51c-201ENSMUST00000007790 1632 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Cd9P40240 Btnl1-201ENSMUST00000080254 1861 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Cd9P40240 Dync1i2-201ENSMUST00000081710 2631 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cd9P40240 Lpar1-203ENSMUST00000107571 3543 ntAPPRIS P3 TSL 5 BASIC11.32□□□□□ -0.6
Cd9P40240 Cdnf-201ENSMUST00000036350 3013 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cd9P40240 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cd9P40240 Zfp37-206ENSMUST00000222050 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cd9P40240 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Cd9P40240 Atp4a-204ENSMUST00000170371 3447 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Cd9P40240 Ssh1-201ENSMUST00000077689 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cd9P40240 Rab11fip2-202ENSMUST00000170819 1539 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Cd9P40240 Gm13045-201ENSMUST00000119019 712 ntBASIC11.32□□□□□ -0.6
Cd9P40240 Gm8876-201ENSMUST00000120768 1122 ntBASIC11.32□□□□□ -0.6
Cd9P40240 Gm13328-201ENSMUST00000120816 1020 ntBASIC11.32□□□□□ -0.6
Cd9P40240 Gm15412-201ENSMUST00000137193 1096 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Cd9P40240 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cd9P40240 Gm17231-203ENSMUST00000170133 637 ntTSL 3 BASIC11.32□□□□□ -0.6
Cd9P40240 Gm18367-201ENSMUST00000176139 600 ntBASIC11.32□□□□□ -0.6
Cd9P40240 Gm21778-201ENSMUST00000178779 471 ntBASIC11.32□□□□□ -0.6
Cd9P40240 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC11.32□□□□□ -0.6
Cd9P40240 Gm28516-201ENSMUST00000190257 663 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Cd9P40240 Gm43186-201ENSMUST00000198130 824 ntBASIC11.32□□□□□ -0.6
Cd9P40240 Gm8615-202ENSMUST00000201946 737 ntTSL 3 BASIC11.32□□□□□ -0.6
Cd9P40240 Gm34973-201ENSMUST00000217087 572 ntTSL 3 BASIC11.32□□□□□ -0.6
Cd9P40240 Gm40578-201ENSMUST00000220837 390 ntTSL 2 BASIC11.32□□□□□ -0.6
Cd9P40240 Abhd11os-203ENSMUST00000222613 363 ntBASIC11.32□□□□□ -0.6
Cd9P40240 Gm1821-202ENSMUST00000227415 750 ntBASIC11.32□□□□□ -0.6
Cd9P40240 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cd9P40240 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cd9P40240 Arl16-201ENSMUST00000076921 911 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cd9P40240 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cd9P40240 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Cd9P40240 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cd9P40240 Palb2-204ENSMUST00000106469 2559 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cd9P40240 Foxp1-221ENSMUST00000176632 2336 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Cd9P40240 Foxp1-222ENSMUST00000176850 2339 ntAPPRIS ALT1 TSL 5 BASIC11.32□□□□□ -0.6
Cd9P40240 Wdr31-202ENSMUST00000107452 1437 ntAPPRIS ALT1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cd9P40240 Akap5-203ENSMUST00000172992 2711 ntAPPRIS ALT2 TSL 3 BASIC11.32□□□□□ -0.6
Cd9P40240 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cd9P40240 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cd9P40240 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Cd9P40240 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Cd9P40240 Tmem138-201ENSMUST00000025568 1590 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cd9P40240 Vamp1-201ENSMUST00000032487 2772 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cd9P40240 Zim1-203ENSMUST00000203908 1740 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Cd9P40240 Pou6f1-201ENSMUST00000058274 2523 ntTSL 2 BASIC11.32□□□□□ -0.6
Cd9P40240 Ttc25-201ENSMUST00000006976 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cd9P40240 Thg1l-201ENSMUST00000011398 2250 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cd9P40240 Alas2-202ENSMUST00000112715 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cd9P40240 Ank2-221ENSMUST00000182994 2715 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Cd9P40240 Hbs1l-209ENSMUST00000219915 2733 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cd9P40240 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cd9P40240 Mei1-201ENSMUST00000089178 3974 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Cd9P40240 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Cd9P40240 Slc10a3-203ENSMUST00000114146 1902 ntAPPRIS P2 TSL 5 BASIC11.31□□□□□ -0.6
Cd9P40240 Pou2f3-201ENSMUST00000034513 2610 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cd9P40240 Gm15958-202ENSMUST00000153479 2087 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Cd9P40240 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cd9P40240 Muc13-201ENSMUST00000023520 2942 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cd9P40240 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Cd9P40240 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cd9P40240 Hpgd-201ENSMUST00000034026 1683 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cd9P40240 Clrn1-203ENSMUST00000072551 1662 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Cd9P40240 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cd9P40240 Ttpa-201ENSMUST00000098244 3053 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cd9P40240 Enpp5-201ENSMUST00000024756 2534 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cd9P40240 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cd9P40240 Gm36957-201ENSMUST00000192982 2824 ntBASIC11.31□□□□□ -0.6
Cd9P40240 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Cd9P40240 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Cd9P40240 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Cd9P40240 Gm12218-201ENSMUST00000117666 399 ntBASIC11.31□□□□□ -0.6
Cd9P40240 Gm15528-201ENSMUST00000117821 864 ntBASIC11.31□□□□□ -0.6
Cd9P40240 Gm9089-201ENSMUST00000122027 526 ntBASIC11.31□□□□□ -0.6
Cd9P40240 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cd9P40240 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Cd9P40240 Ppy-201ENSMUST00000017460 500 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cd9P40240 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms