Protein–RNA interactions for Protein: P31650

Slc6a11, Sodium- and chloride-dependent GABA transporter 3, mousemouse

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a11P31650 Gm10803-201ENSMUST00000099692 2483 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Slc6a11P31650 Hnrnpm-206ENSMUST00000148178 3934 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Slc6a11P31650 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC10.92□□□□□ -0.66
Slc6a11P31650 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Slc6a11P31650 Gm14965-201ENSMUST00000124118 565 ntTSL 2 BASIC10.92□□□□□ -0.66
Slc6a11P31650 Srrm3os-201ENSMUST00000131896 1271 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Slc6a11P31650 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Slc6a11P31650 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC10.92□□□□□ -0.66
Slc6a11P31650 Gm8194-201ENSMUST00000159783 859 ntBASIC10.92□□□□□ -0.66
Slc6a11P31650 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC10.92□□□□□ -0.66
Slc6a11P31650 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Slc6a11P31650 Gm16740-201ENSMUST00000181819 956 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Slc6a11P31650 Gm9034-201ENSMUST00000182071 1005 ntBASIC10.92□□□□□ -0.66
Slc6a11P31650 Gm28215-201ENSMUST00000186146 346 ntTSL 5 BASIC10.92□□□□□ -0.66
Slc6a11P31650 Gm9230-201ENSMUST00000188228 532 ntBASIC10.92□□□□□ -0.66
Slc6a11P31650 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Slc6a11P31650 Gm19287-201ENSMUST00000203190 358 ntBASIC10.92□□□□□ -0.66
Slc6a11P31650 Gm4607-201ENSMUST00000206649 577 ntBASIC10.92□□□□□ -0.66
Slc6a11P31650 AC153961.1-201ENSMUST00000217760 385 ntBASIC10.92□□□□□ -0.66
Slc6a11P31650 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC10.92□□□□□ -0.66
Slc6a11P31650 AC135469.1-201ENSMUST00000225984 772 ntBASIC10.92□□□□□ -0.66
Slc6a11P31650 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Slc6a11P31650 Bpifa1-201ENSMUST00000028985 1106 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Slc6a11P31650 Lcn6-201ENSMUST00000059693 1254 ntTSL 5 BASIC10.92□□□□□ -0.66
Slc6a11P31650 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Slc6a11P31650 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Slc6a11P31650 Rcor3-202ENSMUST00000110849 3791 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Slc6a11P31650 E230029C05Rik-203ENSMUST00000208028 2066 ntBASIC10.92□□□□□ -0.66
Slc6a11P31650 Gm14698-201ENSMUST00000096420 4226 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
Slc6a11P31650 Slc1a4-201ENSMUST00000004634 3872 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Slc6a11P31650 Hap1-202ENSMUST00000138603 3316 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Slc6a11P31650 Bco1-202ENSMUST00000167370 1747 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Slc6a11P31650 Tie1-201ENSMUST00000047421 4091 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Slc6a11P31650 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Slc6a11P31650 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Slc6a11P31650 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Slc6a11P31650 Frg2f1-201ENSMUST00000079611 1909 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Slc6a11P31650 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Slc6a11P31650 Ndufa11-201ENSMUST00000002452 2661 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Slc6a11P31650 1700061G19Rik-201ENSMUST00000025048 2677 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Slc6a11P31650 Jpt2-201ENSMUST00000024981 2933 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Slc6a11P31650 Ppp1r18-201ENSMUST00000113814 3131 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Slc6a11P31650 Igsf9-201ENSMUST00000052629 4133 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Slc6a11P31650 Atp6v1a-201ENSMUST00000063661 3896 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Slc6a11P31650 Als2cl-203ENSMUST00000130386 5056 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Slc6a11P31650 Cpn2-201ENSMUST00000064856 4583 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Slc6a11P31650 Nfic-203ENSMUST00000105321 6237 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Slc6a11P31650 Tyw1-201ENSMUST00000040213 3044 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Slc6a11P31650 Tubb4b-ps2-201ENSMUST00000187481 1337 ntBASIC10.91□□□□□ -0.66
Slc6a11P31650 Tmprss4-201ENSMUST00000034599 2284 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Slc6a11P31650 Anxa6-201ENSMUST00000102727 2471 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Slc6a11P31650 Ssh1-201ENSMUST00000077689 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Slc6a11P31650 Fetub-204ENSMUST00000170805 1508 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Slc6a11P31650 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC10.91□□□□□ -0.66
Slc6a11P31650 Gm2822-201ENSMUST00000164299 2910 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Slc6a11P31650 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Slc6a11P31650 Fut4-201ENSMUST00000061498 4074 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
Slc6a11P31650 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC10.91□□□□□ -0.66
Slc6a11P31650 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Slc6a11P31650 Gm13888-201ENSMUST00000119148 422 ntBASIC10.91□□□□□ -0.66
Slc6a11P31650 Gm1667-201ENSMUST00000151651 558 ntTSL 3 BASIC10.91□□□□□ -0.66
Slc6a11P31650 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Slc6a11P31650 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC10.91□□□□□ -0.66
Slc6a11P31650 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC10.91□□□□□ -0.66
Slc6a11P31650 Gm7003-201ENSMUST00000195089 312 ntBASIC10.91□□□□□ -0.66
Slc6a11P31650 Rbakdn-201ENSMUST00000198334 520 ntTSL 2 BASIC10.91□□□□□ -0.66
Slc6a11P31650 AC153954.1-201ENSMUST00000216959 255 ntBASIC10.91□□□□□ -0.66
Slc6a11P31650 CT571245.2-201ENSMUST00000218421 305 ntBASIC10.91□□□□□ -0.66
Slc6a11P31650 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
Slc6a11P31650 Cd7-201ENSMUST00000026159 982 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Slc6a11P31650 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Slc6a11P31650 Lce1e-201ENSMUST00000090867 711 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Slc6a11P31650 Smtn-203ENSMUST00000075118 3117 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Slc6a11P31650 Rgr-203ENSMUST00000225070 4704 ntBASIC10.91□□□□□ -0.66
Slc6a11P31650 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Slc6a11P31650 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Slc6a11P31650 Phf21a-209ENSMUST00000111297 6188 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Slc6a11P31650 Phf21a-201ENSMUST00000044036 6187 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Slc6a11P31650 Wnt5a-201ENSMUST00000063465 7010 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Slc6a11P31650 LMLN2-201ENSMUST00000224691 2342 ntAPPRIS P5 BASIC10.91□□□□□ -0.66
Slc6a11P31650 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Slc6a11P31650 Pcdhb21-201ENSMUST00000061405 4705 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
Slc6a11P31650 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Slc6a11P31650 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Slc6a11P31650 Tex2-201ENSMUST00000042780 4934 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Slc6a11P31650 Fmnl1-202ENSMUST00000042286 3806 ntAPPRIS P4 TSL 1 (best) BASIC10.91□□□□□ -0.66
Slc6a11P31650 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Slc6a11P31650 Mab21l2-201ENSMUST00000077524 2703 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
Slc6a11P31650 Nsl1-202ENSMUST00000078259 4879 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Slc6a11P31650 Jaml-201ENSMUST00000050020 2461 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Slc6a11P31650 Olfr1495-202ENSMUST00000215930 2025 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Slc6a11P31650 Kif1a-203ENSMUST00000171556 5391 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Slc6a11P31650 Spock2-203ENSMUST00000165024 3699 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
Slc6a11P31650 Zc3h18-205ENSMUST00000176629 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Slc6a11P31650 Timm22-201ENSMUST00000021203 2817 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Slc6a11P31650 Vasn-201ENSMUST00000038770 2829 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Slc6a11P31650 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC10.9□□□□□ -0.66
Slc6a11P31650 Stkld1-201ENSMUST00000055406 2169 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Slc6a11P31650 Als2cl-201ENSMUST00000084926 5079 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Slc6a11P31650 Ccdc162-212ENSMUST00000219054 3182 ntTSL 5 BASIC10.9□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 49.7 ms