Protein–RNA interactions for Protein: P29533

Vcam1, Vascular cell adhesion protein 1, mousemouse

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcam1P29533 Gm20498-203ENSMUST00000166664 2284 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
Vcam1P29533 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Vcam1P29533 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
Vcam1P29533 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Vcam1P29533 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC13.15□□□□□ -0.3
Vcam1P29533 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Vcam1P29533 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Vcam1P29533 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Vcam1P29533 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Vcam1P29533 Zfp410-215ENSMUST00000222832 1859 ntTSL 2 BASIC13.15□□□□□ -0.3
Vcam1P29533 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Vcam1P29533 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Vcam1P29533 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Vcam1P29533 Snord17-201ENSMUST00000104526 238 ntBASIC13.15□□□□□ -0.3
Vcam1P29533 Uqcc1-202ENSMUST00000109631 1091 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Vcam1P29533 Il1rn-202ENSMUST00000114485 728 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Vcam1P29533 Gm14398-201ENSMUST00000117287 1073 ntBASIC13.15□□□□□ -0.3
Vcam1P29533 Apoc3-202ENSMUST00000118649 453 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
Vcam1P29533 Gm14213-201ENSMUST00000119778 768 ntBASIC13.15□□□□□ -0.3
Vcam1P29533 Gm22146-201ENSMUST00000157397 288 ntBASIC13.15□□□□□ -0.3
Vcam1P29533 Gm37365-201ENSMUST00000193109 409 ntBASIC13.15□□□□□ -0.3
Vcam1P29533 Gm44216-201ENSMUST00000203942 157 ntBASIC13.15□□□□□ -0.3
Vcam1P29533 Gm44814-201ENSMUST00000207018 434 ntBASIC13.15□□□□□ -0.3
Vcam1P29533 Gm3433-201ENSMUST00000210149 1058 ntBASIC13.15□□□□□ -0.3
Vcam1P29533 Gm45572-201ENSMUST00000211774 750 ntTSL 5 BASIC13.15□□□□□ -0.3
Vcam1P29533 Ly86-201ENSMUST00000021860 1134 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Vcam1P29533 AC115304.2-201ENSMUST00000226399 332 ntBASIC13.15□□□□□ -0.3
Vcam1P29533 AC130477.1-201ENSMUST00000226982 420 ntBASIC13.15□□□□□ -0.3
Vcam1P29533 Gm10254-201ENSMUST00000052888 867 ntBASIC13.15□□□□□ -0.3
Vcam1P29533 Olfr538-201ENSMUST00000084457 933 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Vcam1P29533 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Vcam1P29533 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Vcam1P29533 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Vcam1P29533 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Vcam1P29533 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Vcam1P29533 Art2b-202ENSMUST00000209526 2819 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Vcam1P29533 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Vcam1P29533 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Vcam1P29533 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Vcam1P29533 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Vcam1P29533 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Vcam1P29533 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Vcam1P29533 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC13.15□□□□□ -0.31
Vcam1P29533 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
Vcam1P29533 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
Vcam1P29533 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Vcam1P29533 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Vcam1P29533 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Vcam1P29533 Cnga4-202ENSMUST00000210344 1977 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Vcam1P29533 Ube2q2-203ENSMUST00000122441 2081 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Vcam1P29533 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Vcam1P29533 D030045P18Rik-204ENSMUST00000215085 2186 ntTSL 5 BASIC13.14□□□□□ -0.31
Vcam1P29533 Rufy2-204ENSMUST00000131718 2816 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Vcam1P29533 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Vcam1P29533 Zfp773-201ENSMUST00000032622 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Vcam1P29533 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Vcam1P29533 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Vcam1P29533 Opn1mw-202ENSMUST00000101457 1233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Vcam1P29533 Cdc42se1-203ENSMUST00000107200 637 ntTSL 3 BASIC13.14□□□□□ -0.31
Vcam1P29533 Gm22846-201ENSMUST00000157706 270 ntBASIC13.14□□□□□ -0.31
Vcam1P29533 Gm25830-201ENSMUST00000158923 132 ntBASIC13.14□□□□□ -0.31
Vcam1P29533 Ins2-208ENSMUST00000162317 297 ntTSL 5 BASIC13.14□□□□□ -0.31
Vcam1P29533 1700017I07Rik-201ENSMUST00000184823 462 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Vcam1P29533 1700088E04Rik-210ENSMUST00000190509 871 ntTSL 5 BASIC13.14□□□□□ -0.31
Vcam1P29533 Fkbp6-204ENSMUST00000201791 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Vcam1P29533 Il18-203ENSMUST00000213916 885 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Vcam1P29533 Gm6390-201ENSMUST00000215034 589 ntBASIC13.14□□□□□ -0.31
Vcam1P29533 Naca-201ENSMUST00000073868 885 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Vcam1P29533 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Vcam1P29533 Gm29295-201ENSMUST00000190004 1371 ntTSL 5 BASIC13.14□□□□□ -0.31
Vcam1P29533 Ccndbp1-202ENSMUST00000099488 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Vcam1P29533 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Vcam1P29533 Socs6-202ENSMUST00000123826 2921 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Vcam1P29533 Lck-208ENSMUST00000167288 2074 ntTSL 5 BASIC13.14□□□□□ -0.31
Vcam1P29533 Spata7-201ENSMUST00000048402 2052 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Vcam1P29533 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Vcam1P29533 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Vcam1P29533 Gm42480-201ENSMUST00000198434 2595 ntBASIC13.14□□□□□ -0.31
Vcam1P29533 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Vcam1P29533 Dck-201ENSMUST00000031311 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Vcam1P29533 Erich3-203ENSMUST00000189969 3460 ntBASIC13.14□□□□□ -0.31
Vcam1P29533 Zfp1-202ENSMUST00000211926 1409 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Vcam1P29533 Npl-201ENSMUST00000041874 1735 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Vcam1P29533 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Vcam1P29533 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Vcam1P29533 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Vcam1P29533 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC13.13□□□□□ -0.31
Vcam1P29533 Gm37105-201ENSMUST00000192251 2085 ntBASIC13.13□□□□□ -0.31
Vcam1P29533 Zfp85os-202ENSMUST00000143812 1784 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Vcam1P29533 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Vcam1P29533 Gm6268-201ENSMUST00000115253 1453 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Vcam1P29533 Hint1-202ENSMUST00000117710 580 ntTSL 2 BASIC13.13□□□□□ -0.31
Vcam1P29533 Mup-ps29-201ENSMUST00000122281 202 ntBASIC13.13□□□□□ -0.31
Vcam1P29533 Gm15911-201ENSMUST00000138992 809 ntTSL 3 BASIC13.13□□□□□ -0.31
Vcam1P29533 Gm15935-201ENSMUST00000141004 607 ntTSL 3 BASIC13.13□□□□□ -0.31
Vcam1P29533 Ighv1-76-201ENSMUST00000169155 294 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Vcam1P29533 Ighv1-62-1-202ENSMUST00000171270 90 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Vcam1P29533 Gm18201-201ENSMUST00000174735 875 ntBASIC13.13□□□□□ -0.31
Vcam1P29533 Gm21964-201ENSMUST00000178785 936 ntTSL 5 BASIC13.13□□□□□ -0.31
Vcam1P29533 Gm7719-201ENSMUST00000182374 975 ntBASIC13.13□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 51.5 ms