Protein–RNA interactions for Protein: P22518

Clk1, Dual specificity protein kinase CLK1, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk1P22518 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Clk1P22518 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Clk1P22518 Gm43267-201ENSMUST00000199664 1796 ntBASIC10.82□□□□□ -0.68
Clk1P22518 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Clk1P22518 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC10.82□□□□□ -0.68
Clk1P22518 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Clk1P22518 Myo7a-201ENSMUST00000084979 6849 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Clk1P22518 Dok4-204ENSMUST00000212810 2558 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Clk1P22518 Gtf2i-202ENSMUST00000082057 4375 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Clk1P22518 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC10.82□□□□□ -0.68
Clk1P22518 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Clk1P22518 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Clk1P22518 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Clk1P22518 Gm15903-202ENSMUST00000199631 3518 ntBASIC10.82□□□□□ -0.68
Clk1P22518 Os9-202ENSMUST00000164259 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Clk1P22518 Slc2a4rg-ps-201ENSMUST00000127559 2976 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Clk1P22518 Rab27a-201ENSMUST00000034722 2979 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Clk1P22518 4930484H19Rik-201ENSMUST00000218870 1737 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Clk1P22518 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Clk1P22518 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC10.82□□□□□ -0.68
Clk1P22518 Vil1-201ENSMUST00000027366 3124 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Clk1P22518 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Clk1P22518 Gm12201-201ENSMUST00000120657 1234 ntBASIC10.82□□□□□ -0.68
Clk1P22518 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC10.82□□□□□ -0.68
Clk1P22518 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Clk1P22518 Pla2g1b-204ENSMUST00000145785 419 ntTSL 5 BASIC10.82□□□□□ -0.68
Clk1P22518 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC10.82□□□□□ -0.68
Clk1P22518 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC10.82□□□□□ -0.68
Clk1P22518 Mir7677-201ENSMUST00000184226 67 ntBASIC10.82□□□□□ -0.68
Clk1P22518 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Clk1P22518 Ighv1-62-201ENSMUST00000193406 350 ntBASIC10.82□□□□□ -0.68
Clk1P22518 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC10.82□□□□□ -0.68
Clk1P22518 Gm18212-201ENSMUST00000211678 889 ntBASIC10.82□□□□□ -0.68
Clk1P22518 Gm17827-201ENSMUST00000211825 742 ntBASIC10.82□□□□□ -0.68
Clk1P22518 Gm270-201ENSMUST00000223010 976 ntBASIC10.82□□□□□ -0.68
Clk1P22518 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Clk1P22518 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Clk1P22518 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Clk1P22518 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Clk1P22518 Trim11-202ENSMUST00000108809 3522 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Clk1P22518 Col9a1-202ENSMUST00000088349 3059 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Clk1P22518 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Clk1P22518 Pyurf-201ENSMUST00000053386 3573 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Clk1P22518 Natd1-201ENSMUST00000019075 4179 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Clk1P22518 Ypel4-201ENSMUST00000090729 1676 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Clk1P22518 Abcg4-201ENSMUST00000034648 3476 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Clk1P22518 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Clk1P22518 Gm39244-201ENSMUST00000209663 1940 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Clk1P22518 Gm10152-201ENSMUST00000193475 1344 ntBASIC10.82□□□□□ -0.68
Clk1P22518 Ppp4r1l-ps-202ENSMUST00000132669 2767 ntBASIC10.82□□□□□ -0.68
Clk1P22518 Il27ra-201ENSMUST00000005601 2664 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Clk1P22518 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Clk1P22518 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Clk1P22518 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Clk1P22518 Tmem106a-201ENSMUST00000039581 2304 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Clk1P22518 Togaram1-201ENSMUST00000066296 6372 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Clk1P22518 Frmpd2-203ENSMUST00000208577 5192 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Clk1P22518 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Clk1P22518 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Clk1P22518 Gm38005-201ENSMUST00000194845 2745 ntBASIC10.81□□□□□ -0.68
Clk1P22518 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Clk1P22518 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Clk1P22518 Corin-202ENSMUST00000167460 4639 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Clk1P22518 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Clk1P22518 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Clk1P22518 Myh1-201ENSMUST00000018637 5938 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Clk1P22518 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Clk1P22518 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC10.81□□□□□ -0.68
Clk1P22518 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC10.81□□□□□ -0.68
Clk1P22518 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC10.81□□□□□ -0.68
Clk1P22518 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Clk1P22518 Gm15004-201ENSMUST00000119192 630 ntBASIC10.81□□□□□ -0.68
Clk1P22518 Gm14441-201ENSMUST00000121960 540 ntBASIC10.81□□□□□ -0.68
Clk1P22518 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Clk1P22518 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Clk1P22518 Gm4819-201ENSMUST00000182170 1009 ntBASIC10.81□□□□□ -0.68
Clk1P22518 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Clk1P22518 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC10.81□□□□□ -0.68
Clk1P22518 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC10.81□□□□□ -0.68
Clk1P22518 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Clk1P22518 Gm28635-201ENSMUST00000189772 4734 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Clk1P22518 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Clk1P22518 Dis3l-201ENSMUST00000068367 3605 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Clk1P22518 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Clk1P22518 Rab3gap2-204ENSMUST00000194740 4418 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Clk1P22518 Adora1-203ENSMUST00000169927 4581 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Clk1P22518 Gm16387-201ENSMUST00000180990 2632 ntBASIC10.81□□□□□ -0.68
Clk1P22518 Zfp780b-201ENSMUST00000081618 3004 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Clk1P22518 Plekhn1-204ENSMUST00000218699 3196 ntTSL 2 BASIC10.81□□□□□ -0.68
Clk1P22518 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC10.81□□□□□ -0.68
Clk1P22518 Map4-203ENSMUST00000163979 3320 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Clk1P22518 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Clk1P22518 Nos3-201ENSMUST00000030834 4132 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Clk1P22518 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Clk1P22518 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC10.81□□□□□ -0.68
Clk1P22518 Megf8-201ENSMUST00000128119 10040 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Clk1P22518 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC10.8□□□□□ -0.68
Clk1P22518 Gm43760-201ENSMUST00000202120 3015 ntBASIC10.8□□□□□ -0.68
Clk1P22518 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Clk1P22518 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 77.1 ms