Protein–RNA interactions for Protein: P11416

Rara, Retinoic acid receptor alpha, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RaraP11416 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
RaraP11416 Fam109b-203ENSMUST00000161178 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
RaraP11416 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
RaraP11416 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
RaraP11416 Plek2-201ENSMUST00000021544 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
RaraP11416 Flad1-202ENSMUST00000107426 2238 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
RaraP11416 Dpep1-201ENSMUST00000019422 2236 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
RaraP11416 Lrrc55-201ENSMUST00000099930 2217 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
RaraP11416 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
RaraP11416 Flad1-204ENSMUST00000129308 2892 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
RaraP11416 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
RaraP11416 Aldh16a1-206ENSMUST00000209963 3537 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
RaraP11416 Snx13-202ENSMUST00000163677 3681 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
RaraP11416 A930024N18Rik-201ENSMUST00000181251 3955 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
RaraP11416 Igsf1-204ENSMUST00000114893 2671 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
RaraP11416 Sgk2-201ENSMUST00000018012 2693 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
RaraP11416 Cc2d1a-201ENSMUST00000040383 3471 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
RaraP11416 Tex2-201ENSMUST00000042780 4934 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
RaraP11416 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
RaraP11416 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
RaraP11416 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
RaraP11416 Psd3-213ENSMUST00000212505 3253 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
RaraP11416 Gm44415-201ENSMUST00000204151 2112 ntBASIC12.41□□□□□ -0.42
RaraP11416 Vipr2-201ENSMUST00000011315 3383 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
RaraP11416 Srsf6-203ENSMUST00000130411 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
RaraP11416 AC154314.2-201ENSMUST00000223677 3502 ntBASIC12.41□□□□□ -0.42
RaraP11416 Slc9a3-204ENSMUST00000225423 2589 ntAPPRIS ALT2 BASIC12.41□□□□□ -0.42
RaraP11416 Fermt3-201ENSMUST00000040772 2587 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
RaraP11416 Rasgrp4-210ENSMUST00000203070 3008 ntTSL 5 BASIC12.41□□□□□ -0.42
RaraP11416 Tgif1-201ENSMUST00000059775 1631 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
RaraP11416 D930020B18Rik-201ENSMUST00000120642 3335 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
RaraP11416 Slc10a3-203ENSMUST00000114146 1902 ntAPPRIS P2 TSL 5 BASIC12.41□□□□□ -0.42
RaraP11416 Igsf9-202ENSMUST00000111235 4205 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
RaraP11416 Exoc4-203ENSMUST00000115080 2369 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
RaraP11416 Dll4-201ENSMUST00000102517 3747 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
RaraP11416 Myo1b-201ENSMUST00000018561 4767 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
RaraP11416 Mpl-202ENSMUST00000102671 2934 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
RaraP11416 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC12.41□□□□□ -0.42
RaraP11416 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
RaraP11416 Tcn2-207ENSMUST00000109993 2027 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
RaraP11416 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
RaraP11416 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
RaraP11416 Gm7150-201ENSMUST00000122032 981 ntBASIC12.41□□□□□ -0.42
RaraP11416 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
RaraP11416 E130307A14Rik-204ENSMUST00000139356 701 ntTSL 3 BASIC12.41□□□□□ -0.42
RaraP11416 9130204K15Rik-202ENSMUST00000150312 696 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
RaraP11416 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
RaraP11416 Gm5846-201ENSMUST00000193146 1414 ntBASIC12.41□□□□□ -0.42
RaraP11416 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
RaraP11416 Gm44008-201ENSMUST00000204345 412 ntBASIC12.41□□□□□ -0.42
RaraP11416 AC125374.1-201ENSMUST00000213573 1400 ntBASIC12.41□□□□□ -0.42
RaraP11416 Magee2-201ENSMUST00000033575 2316 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
RaraP11416 Gm5537-201ENSMUST00000091117 1252 ntBASIC12.41□□□□□ -0.42
RaraP11416 Rbl2-210ENSMUST00000211136 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
RaraP11416 Scaf1-206ENSMUST00000211735 4209 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
RaraP11416 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
RaraP11416 Gm20755-201ENSMUST00000196893 1827 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
RaraP11416 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
RaraP11416 Bcar1-203ENSMUST00000212349 3116 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
RaraP11416 Tmem231-201ENSMUST00000034429 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
RaraP11416 Crot-201ENSMUST00000003720 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
RaraP11416 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
RaraP11416 Nup210-201ENSMUST00000032179 7037 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
RaraP11416 Yeats2-202ENSMUST00000115560 6116 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
RaraP11416 Nxpe5-204ENSMUST00000161047 2379 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
RaraP11416 Zfp235-201ENSMUST00000056549 3373 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
RaraP11416 Zcchc8-204ENSMUST00000196282 4350 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
RaraP11416 Trip4-202ENSMUST00000119245 4211 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
RaraP11416 Tube1-201ENSMUST00000019991 2929 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
RaraP11416 Mirg-201ENSMUST00000181496 1906 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
RaraP11416 4933406M09Rik-201ENSMUST00000162187 1768 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
RaraP11416 Gm20757-201ENSMUST00000182870 1604 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
RaraP11416 Poldip3-202ENSMUST00000100375 3157 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
RaraP11416 Arhgap11a-202ENSMUST00000110947 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
RaraP11416 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
RaraP11416 Msh5-201ENSMUST00000007250 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
RaraP11416 Ric8a-201ENSMUST00000026558 3406 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
RaraP11416 Nlrp6-201ENSMUST00000106045 3823 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
RaraP11416 3830406C13Rik-209ENSMUST00000224389 2444 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
RaraP11416 Gm4419-201ENSMUST00000180671 1729 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
RaraP11416 AC125409.1-201ENSMUST00000223213 3370 ntBASIC12.4□□□□□ -0.42
RaraP11416 Svop-201ENSMUST00000058472 3379 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
RaraP11416 Foxp1-201ENSMUST00000074346 2118 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
RaraP11416 Kng2-203ENSMUST00000115349 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
RaraP11416 Tmem138-201ENSMUST00000025568 1590 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
RaraP11416 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
RaraP11416 Cd55-201ENSMUST00000027650 2533 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
RaraP11416 Zfp398-201ENSMUST00000079881 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
RaraP11416 Plekhg4-203ENSMUST00000160191 3339 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
RaraP11416 Saxo2-201ENSMUST00000056728 2783 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
RaraP11416 Gm9466-201ENSMUST00000218144 2246 ntBASIC12.4□□□□□ -0.42
RaraP11416 Slc22a14-201ENSMUST00000093775 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
RaraP11416 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
RaraP11416 Colca2-201ENSMUST00000114427 1263 ntAPPRIS P1 TSL 3 BASIC12.4□□□□□ -0.42
RaraP11416 Gm11663-201ENSMUST00000117888 290 ntBASIC12.4□□□□□ -0.42
RaraP11416 Gm12962-202ENSMUST00000144212 691 ntTSL 2 BASIC12.4□□□□□ -0.42
RaraP11416 4930422M22Rik-201ENSMUST00000191492 948 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
RaraP11416 Gm5852-201ENSMUST00000194119 1021 ntBASIC12.4□□□□□ -0.42
RaraP11416 Gm5869-201ENSMUST00000200248 1257 ntBASIC12.4□□□□□ -0.42
RaraP11416 AC148334.1-201ENSMUST00000220853 370 ntTSL 5 BASIC12.4□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms