Protein–RNA interactions for Protein: P10855

Ccl3, C-C motif chemokine 3, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl3P10855 Prf1-201ENSMUST00000035419 1968 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Ccl3P10855 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Ccl3P10855 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Ccl3P10855 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC10.13□□□□□ -0.79
Ccl3P10855 Gpcpd1-204ENSMUST00000110136 3546 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Ccl3P10855 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Ccl3P10855 Nudt13-207ENSMUST00000224311 1574 ntBASIC10.13□□□□□ -0.79
Ccl3P10855 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Ccl3P10855 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC10.13□□□□□ -0.79
Ccl3P10855 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Ccl3P10855 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Ccl3P10855 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC10.13□□□□□ -0.79
Ccl3P10855 Klhdc10-206ENSMUST00000144272 1387 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Ccl3P10855 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Ccl3P10855 Tmem237-205ENSMUST00000186794 1533 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Ccl3P10855 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Ccl3P10855 1500004A13Rik-209ENSMUST00000185189 1659 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Ccl3P10855 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Ccl3P10855 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Ccl3P10855 Pax5-205ENSMUST00000107827 1315 ntTSL 5 BASIC10.12□□□□□ -0.79
Ccl3P10855 Gm28424-201ENSMUST00000187393 1319 ntBASIC10.12□□□□□ -0.79
Ccl3P10855 Syt7-202ENSMUST00000076968 6624 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Ccl3P10855 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Ccl3P10855 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Ccl3P10855 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Ccl3P10855 Gm13553-201ENSMUST00000133025 1970 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Ccl3P10855 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC10.12□□□□□ -0.79
Ccl3P10855 Gm5434-202ENSMUST00000222384 1451 ntBASIC10.12□□□□□ -0.79
Ccl3P10855 Gm5434-201ENSMUST00000071825 1451 ntBASIC10.12□□□□□ -0.79
Ccl3P10855 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Ccl3P10855 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Ccl3P10855 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Ccl3P10855 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC10.12□□□□□ -0.79
Ccl3P10855 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC10.12□□□□□ -0.79
Ccl3P10855 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Ccl3P10855 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Ccl3P10855 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Ccl3P10855 Gm11554-201ENSMUST00000105056 890 ntAPPRIS P1 BASIC10.12□□□□□ -0.79
Ccl3P10855 Ifitm1-202ENSMUST00000106040 560 ntAPPRIS P1 TSL 3 BASIC10.12□□□□□ -0.79
Ccl3P10855 Ifitm1-203ENSMUST00000106042 882 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Ccl3P10855 Cisd3-203ENSMUST00000107585 586 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Ccl3P10855 Gm6158-201ENSMUST00000109467 904 ntBASIC10.12□□□□□ -0.79
Ccl3P10855 Saxo2-202ENSMUST00000126478 430 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Ccl3P10855 Gm14222-201ENSMUST00000128681 575 ntTSL 2 BASIC10.12□□□□□ -0.79
Ccl3P10855 4930507D10Rik-201ENSMUST00000137411 1152 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Ccl3P10855 Polr3c-205ENSMUST00000141377 808 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Ccl3P10855 Olfml3-204ENSMUST00000169286 874 ntBASIC10.12□□□□□ -0.79
Ccl3P10855 Gm25677-201ENSMUST00000174983 72 ntBASIC10.12□□□□□ -0.79
Ccl3P10855 H2-Bl-203ENSMUST00000183999 358 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Ccl3P10855 Gm37852-201ENSMUST00000193027 350 ntBASIC10.12□□□□□ -0.79
Ccl3P10855 Zfp655-203ENSMUST00000196069 1150 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Ccl3P10855 3110009M11Rik-201ENSMUST00000208647 892 ntBASIC10.12□□□□□ -0.79
Ccl3P10855 Gm18035-201ENSMUST00000211962 589 ntBASIC10.12□□□□□ -0.79
Ccl3P10855 Ifitm1-201ENSMUST00000026564 736 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Ccl3P10855 Hddc2-201ENSMUST00000000304 858 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Ccl3P10855 Gm20554-201ENSMUST00000177421 2352 ntBASIC10.12□□□□□ -0.79
Ccl3P10855 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Ccl3P10855 Gm44106-201ENSMUST00000203153 1599 ntBASIC10.12□□□□□ -0.79
Ccl3P10855 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC10.12□□□□□ -0.79
Ccl3P10855 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Ccl3P10855 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Ccl3P10855 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Ccl3P10855 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC10.12□□□□□ -0.79
Ccl3P10855 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Ccl3P10855 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Ccl3P10855 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Ccl3P10855 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Ccl3P10855 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC10.12□□□□□ -0.79
Ccl3P10855 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC10.12□□□□□ -0.79
Ccl3P10855 Scaf4-202ENSMUST00000163419 4169 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Ccl3P10855 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Ccl3P10855 Ces2e-201ENSMUST00000034355 2699 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Ccl3P10855 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Ccl3P10855 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Ccl3P10855 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Ccl3P10855 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC10.11□□□□□ -0.79
Ccl3P10855 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC10.11□□□□□ -0.79
Ccl3P10855 Duxf3-201ENSMUST00000174056 1486 ntTSL 5 BASIC10.11□□□□□ -0.79
Ccl3P10855 Gprc5d-202ENSMUST00000111922 1317 ntAPPRIS P3 TSL 1 (best) BASIC10.11□□□□□ -0.79
Ccl3P10855 AC154517.2-201ENSMUST00000220829 2458 ntBASIC10.11□□□□□ -0.79
Ccl3P10855 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC10.11□□□□□ -0.79
Ccl3P10855 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Ccl3P10855 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Ccl3P10855 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC10.11□□□□□ -0.79
Ccl3P10855 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Ccl3P10855 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Ccl3P10855 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC10.11□□□□□ -0.79
Ccl3P10855 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Ccl3P10855 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Ccl3P10855 Prex1-202ENSMUST00000099080 5818 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Ccl3P10855 Mir671-201ENSMUST00000102432 98 ntBASIC10.11□□□□□ -0.79
Ccl3P10855 Gm25562-201ENSMUST00000104608 133 ntBASIC10.11□□□□□ -0.79
Ccl3P10855 Ankrd60-201ENSMUST00000109112 833 ntAPPRIS ALT2 TSL 3 BASIC10.11□□□□□ -0.79
Ccl3P10855 Nnmt-202ENSMUST00000119426 912 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Ccl3P10855 Dnmt3l-203ENSMUST00000131825 1113 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Ccl3P10855 Dnmt3l-206ENSMUST00000139539 1279 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Ccl3P10855 Gm13026-201ENSMUST00000140113 608 ntTSL 5 BASIC10.11□□□□□ -0.79
Ccl3P10855 Gm25343-201ENSMUST00000157460 107 ntBASIC10.11□□□□□ -0.79
Ccl3P10855 Adora3-202ENSMUST00000164730 1219 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Ccl3P10855 Mir7035-201ENSMUST00000184713 82 ntBASIC10.11□□□□□ -0.79
Retrieved 100 of 76,532 protein–RNA pairs in 60.6 ms