Protein–RNA interactions for Protein: P10146

Ccl1, C-C motif chemokine 1, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl1P10146 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC8.85□□□□□ -0.99
Ccl1P10146 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC8.85□□□□□ -0.99
Ccl1P10146 AC135669.1-201ENSMUST00000213585 412 ntBASIC8.85□□□□□ -0.99
Ccl1P10146 Gm7293-201ENSMUST00000216682 1007 ntBASIC8.85□□□□□ -0.99
Ccl1P10146 Wdyhv1-206ENSMUST00000227142 786 ntBASIC8.85□□□□□ -0.99
Ccl1P10146 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Ccl1P10146 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Ccl1P10146 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC8.85□□□□□ -0.99
Ccl1P10146 Prpf40b-202ENSMUST00000118287 3129 ntAPPRIS ALT2 TSL 1 (best) BASIC8.85□□□□□ -0.99
Ccl1P10146 Apol7a-203ENSMUST00000175919 2263 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Ccl1P10146 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC8.85□□□□□ -0.99
Ccl1P10146 Vamp1-202ENSMUST00000063588 1400 ntTSL 2 BASIC8.85□□□□□ -0.99
Ccl1P10146 Cct3-208ENSMUST00000168062 1943 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Ccl1P10146 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC8.85□□□□□ -0.99
Ccl1P10146 Eif2ak4-201ENSMUST00000005233 5212 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Ccl1P10146 Gnas-223ENSMUST00000185956 3729 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Ccl1P10146 Gnas-224ENSMUST00000186907 3729 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Ccl1P10146 BC049352-203ENSMUST00000171799 1714 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Ccl1P10146 Pcdh15-207ENSMUST00000124046 5336 ntTSL 5 BASIC8.85□□□□□ -0.99
Ccl1P10146 Slc12a8-203ENSMUST00000119173 2382 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Ccl1P10146 Rxfp2-201ENSMUST00000065745 2539 ntAPPRIS P3 TSL 1 (best) BASIC8.85□□□□□ -0.99
Ccl1P10146 Dglucy-204ENSMUST00000110073 3184 ntAPPRIS ALT2 TSL 5 BASIC8.85□□□□□ -0.99
Ccl1P10146 Gm44663-201ENSMUST00000206898 3150 ntBASIC8.85□□□□□ -0.99
Ccl1P10146 Sap18-204ENSMUST00000128764 5125 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Ccl1P10146 Tcn2-207ENSMUST00000109993 2027 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Ccl1P10146 Cinp-201ENSMUST00000043716 2029 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Ccl1P10146 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC8.85□□□□□ -0.99
Ccl1P10146 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC8.85□□□□□ -0.99
Ccl1P10146 Zfp804b-202ENSMUST00000200317 4430 ntAPPRIS P1 TSL 5 BASIC8.85□□□□□ -0.99
Ccl1P10146 Ablim2-204ENSMUST00000114204 2953 ntAPPRIS ALT2 TSL 5 BASIC8.85□□□□□ -0.99
Ccl1P10146 Gm8752-201ENSMUST00000173427 1694 ntBASIC8.85□□□□□ -0.99
Ccl1P10146 Fntb-201ENSMUST00000041008 2613 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Ccl1P10146 Fbxo8-201ENSMUST00000040218 3571 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Ccl1P10146 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC8.84□□□□□ -0.99
Ccl1P10146 Rufy4-202ENSMUST00000127134 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC8.84□□□□□ -0.99
Ccl1P10146 Gp2-201ENSMUST00000033255 1993 ntAPPRIS P2 TSL 1 (best) BASIC8.84□□□□□ -0.99
Ccl1P10146 Tmprss5-202ENSMUST00000165088 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC8.84□□□□□ -0.99
Ccl1P10146 Pigk-204ENSMUST00000159899 4737 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Ccl1P10146 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC8.84□□□□□ -0.99
Ccl1P10146 Gm8110-202ENSMUST00000211297 1782 ntTSL 5 BASIC8.84□□□□□ -0.99
Ccl1P10146 Abcg1-201ENSMUST00000024829 3610 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Ccl1P10146 Clock-201ENSMUST00000075159 7478 ntAPPRIS P3 TSL 1 (best) BASIC8.84□□□□□ -0.99
Ccl1P10146 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC8.84□□□□□ -0.99
Ccl1P10146 Ano10-203ENSMUST00000214409 2384 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Ccl1P10146 Nf2-202ENSMUST00000056290 2394 ntAPPRIS ALT1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Ccl1P10146 Tcaf1-202ENSMUST00000045140 5256 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Ccl1P10146 Syncrip-208ENSMUST00000174282 3404 ntAPPRIS ALT1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Ccl1P10146 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC8.84□□□□□ -0.99
Ccl1P10146 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Ccl1P10146 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC8.84□□□□□ -0.99
Ccl1P10146 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC8.84□□□□□ -0.99
Ccl1P10146 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Ccl1P10146 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC8.84□□□□□ -0.99
Ccl1P10146 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Ccl1P10146 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC8.84□□□□□ -0.99
Ccl1P10146 Gm27847-201ENSMUST00000183711 107 ntBASIC8.84□□□□□ -0.99
Ccl1P10146 Gm27375-201ENSMUST00000183799 107 ntBASIC8.84□□□□□ -0.99
Ccl1P10146 Gm27486-201ENSMUST00000184923 80 ntBASIC8.84□□□□□ -0.99
Ccl1P10146 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC8.84□□□□□ -0.99
Ccl1P10146 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Ccl1P10146 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC8.84□□□□□ -0.99
Ccl1P10146 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC8.84□□□□□ -0.99
Ccl1P10146 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC8.84□□□□□ -0.99
Ccl1P10146 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC8.84□□□□□ -0.99
Ccl1P10146 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC8.84□□□□□ -0.99
Ccl1P10146 Csnk1g1-214ENSMUST00000206594 2482 ntAPPRIS P2 TSL 5 BASIC8.84□□□□□ -0.99
Ccl1P10146 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC8.84□□□□□ -0.99
Ccl1P10146 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC8.84□□□□□ -0.99
Ccl1P10146 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC8.84□□□□□ -0.99
Ccl1P10146 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Ccl1P10146 Zfp558-202ENSMUST00000034647 1701 ntAPPRIS P1 TSL 5 BASIC8.84□□□□□ -0.99
Ccl1P10146 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Ccl1P10146 Atf7ip2-201ENSMUST00000044005 2778 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Ccl1P10146 Hk3-201ENSMUST00000052949 3219 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Ccl1P10146 Gm2423-201ENSMUST00000074863 733 ntBASIC8.84□□□□□ -0.99
Ccl1P10146 Atp11c-202ENSMUST00000101527 6044 ntAPPRIS P4 TSL 1 (best) BASIC8.84□□□□□ -0.99
Ccl1P10146 Gm32742-201ENSMUST00000210433 8516 ntAPPRIS P1 TSL 5 BASIC8.84□□□□□ -0.99
Ccl1P10146 Cdk5rap1-201ENSMUST00000028990 1970 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Ccl1P10146 Pex26-203ENSMUST00000120066 3861 ntAPPRIS ALT2 TSL 1 (best) BASIC8.84□□□□□ -0.99
Ccl1P10146 Arpp21-217ENSMUST00000161412 1687 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Ccl1P10146 Wnk1-204ENSMUST00000088646 8364 ntAPPRIS ALT2 TSL 1 (best) BASIC8.84□□□□□ -0.99
Ccl1P10146 Sema4g-203ENSMUST00000179305 4290 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Ccl1P10146 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC8.84□□□□□ -0.99
Ccl1P10146 G630064G18Rik-201ENSMUST00000209814 1795 ntTSL 1 (best) BASIC8.84□□□□□ -1
Ccl1P10146 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC8.83□□□□□ -1
Ccl1P10146 Frmd4b-201ENSMUST00000032146 3159 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Ccl1P10146 Cntd1-201ENSMUST00000103107 2335 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Ccl1P10146 Rnpc3-201ENSMUST00000092154 3888 ntAPPRIS P3 TSL 1 (best) BASIC8.83□□□□□ -1
Ccl1P10146 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC8.83□□□□□ -1
Ccl1P10146 Vstm2a-201ENSMUST00000109645 3264 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Ccl1P10146 Gramd1b-214ENSMUST00000216821 7445 ntAPPRIS ALT2 TSL 5 BASIC8.83□□□□□ -1
Ccl1P10146 Sh2d5-201ENSMUST00000105823 3529 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Ccl1P10146 Ptp4a3-203ENSMUST00000165541 3539 ntAPPRIS P1 TSL 5 BASIC8.83□□□□□ -1
Ccl1P10146 Tasp1-203ENSMUST00000110079 2258 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Ccl1P10146 Ptpn21-202ENSMUST00000170188 5562 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Ccl1P10146 Nfya-201ENSMUST00000046719 3645 ntAPPRIS ALT1 TSL 1 (best) BASIC8.83□□□□□ -1
Ccl1P10146 Nfx1-202ENSMUST00000091614 3617 ntTSL 1 (best) BASIC8.83□□□□□ -1
Ccl1P10146 Sorbs3-203ENSMUST00000227653 3061 ntAPPRIS ALT2 BASIC8.83□□□□□ -1
Ccl1P10146 Zfp109-202ENSMUST00000206362 2932 ntAPPRIS P2 TSL 1 (best) BASIC8.83□□□□□ -1
Ccl1P10146 Nphs1-203ENSMUST00000126297 3877 ntAPPRIS ALT2 TSL 1 (best) BASIC8.83□□□□□ -1
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms