Protein–RNA interactions for Protein: P09405

Ncl, Nucleolin, mousemouse

Known RBP Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NclP09405 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
NclP09405 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
NclP09405 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NclP09405 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
NclP09405 Pfkfb2-208ENSMUST00000187089 1690 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
NclP09405 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
NclP09405 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NclP09405 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
NclP09405 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
NclP09405 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
NclP09405 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
NclP09405 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
NclP09405 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NclP09405 Cetn2-203ENSMUST00000114551 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NclP09405 Gm13422-201ENSMUST00000118834 504 ntBASIC17.04■□□□□ 0.32
NclP09405 Vps25-205ENSMUST00000121331 790 ntTSL 2 BASIC17.04■□□□□ 0.32
NclP09405 Gm11211-201ENSMUST00000143618 359 ntTSL 3 BASIC17.04■□□□□ 0.32
NclP09405 1700122E12Rik-202ENSMUST00000147538 479 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
NclP09405 Gm15744-201ENSMUST00000161734 213 ntBASIC17.04■□□□□ 0.32
NclP09405 Gm42790-201ENSMUST00000201268 969 ntBASIC17.04■□□□□ 0.32
NclP09405 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC17.04■□□□□ 0.32
NclP09405 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC17.04■□□□□ 0.32
NclP09405 Gm45460-201ENSMUST00000211385 1038 ntTSL 5 BASIC17.04■□□□□ 0.32
NclP09405 AC114645.1-201ENSMUST00000215831 187 ntBASIC17.04■□□□□ 0.32
NclP09405 Gm9962-201ENSMUST00000085241 321 ntTSL 5 BASIC17.04■□□□□ 0.32
NclP09405 n-R5s211-201ENSMUST00000093689 119 ntBASIC17.04■□□□□ 0.32
NclP09405 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NclP09405 Adamts10-201ENSMUST00000087623 4043 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
NclP09405 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
NclP09405 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NclP09405 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
NclP09405 Smarca2-216ENSMUST00000176769 5703 ntTSL 5 BASIC17.04■□□□□ 0.32
NclP09405 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NclP09405 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NclP09405 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
NclP09405 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
NclP09405 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NclP09405 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
NclP09405 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
NclP09405 Btbd9-201ENSMUST00000079924 6657 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NclP09405 Aurkc-203ENSMUST00000207711 1320 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
NclP09405 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
NclP09405 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NclP09405 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
NclP09405 Slc24a5-201ENSMUST00000070353 1954 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NclP09405 Ighv5-9-201ENSMUST00000103448 418 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
NclP09405 Ighv10-3-201ENSMUST00000103495 377 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
NclP09405 E130307A14Rik-204ENSMUST00000139356 701 ntTSL 3 BASIC17.03■□□□□ 0.32
NclP09405 Gm25492-201ENSMUST00000157383 129 ntBASIC17.03■□□□□ 0.32
NclP09405 Rwdd2a-202ENSMUST00000179212 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NclP09405 Mir6958-201ENSMUST00000184207 73 ntBASIC17.03■□□□□ 0.32
NclP09405 Calm5-202ENSMUST00000184271 423 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NclP09405 Gm35025-203ENSMUST00000193519 634 ntTSL 3 BASIC17.03■□□□□ 0.32
NclP09405 Gm37284-201ENSMUST00000193607 539 ntBASIC17.03■□□□□ 0.32
NclP09405 Gm5100-201ENSMUST00000195631 589 ntBASIC17.03■□□□□ 0.32
NclP09405 Ptbp2-210ENSMUST00000198403 389 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
NclP09405 Gm3793-201ENSMUST00000204973 672 ntBASIC17.03■□□□□ 0.32
NclP09405 Gm44759-201ENSMUST00000206057 430 ntTSL 3 BASIC17.03■□□□□ 0.32
NclP09405 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC17.03■□□□□ 0.32
NclP09405 Chmp3-202ENSMUST00000065364 998 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NclP09405 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
NclP09405 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NclP09405 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
NclP09405 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
NclP09405 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
NclP09405 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
NclP09405 Col15a1-203ENSMUST00000107730 1755 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
NclP09405 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
NclP09405 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
NclP09405 Foxh1-201ENSMUST00000037824 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
NclP09405 Tcn2-203ENSMUST00000109989 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
NclP09405 Gm15567-201ENSMUST00000148699 2130 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
NclP09405 Gm43172-201ENSMUST00000202139 2137 ntBASIC17.02■□□□□ 0.32
NclP09405 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
NclP09405 LMLN2-201ENSMUST00000224691 2342 ntAPPRIS P5 BASIC17.02■□□□□ 0.32
NclP09405 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
NclP09405 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
NclP09405 Mbtps2-203ENSMUST00000112522 3891 ntTSL 2 BASIC17.02■□□□□ 0.32
NclP09405 Mbtps2-208ENSMUST00000179062 3890 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
NclP09405 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
NclP09405 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
NclP09405 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC17.02■□□□□ 0.32
NclP09405 Gm13791-201ENSMUST00000123263 608 ntTSL 3 BASIC17.02■□□□□ 0.32
NclP09405 Gm14275-201ENSMUST00000152112 430 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
NclP09405 Coa3-202ENSMUST00000168089 291 ntTSL 3 BASIC17.02■□□□□ 0.32
NclP09405 Nutf2-202ENSMUST00000212042 645 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.32
NclP09405 Lgi3-203ENSMUST00000226548 1001 ntBASIC17.02■□□□□ 0.32
NclP09405 Sst-201ENSMUST00000004480 599 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
NclP09405 Gm10263-201ENSMUST00000085163 300 ntBASIC17.02■□□□□ 0.32
NclP09405 Kif2a-202ENSMUST00000117423 2023 ntTSL 5 BASIC17.02■□□□□ 0.32
NclP09405 Tcim-201ENSMUST00000052622 1805 ntAPPRIS P1 BASIC17.02■□□□□ 0.31
NclP09405 Stat3-202ENSMUST00000103114 6042 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
NclP09405 Gm20757-201ENSMUST00000182870 1604 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
NclP09405 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
NclP09405 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
NclP09405 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
NclP09405 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
NclP09405 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
NclP09405 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
NclP09405 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 45.2 ms