Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 Tbc1d22bos-201ENSMUST00000159875 826 ntTSL 3 BASIC9.22□□□□□ -0.93
Hoxd3P09027 Snrpa-206ENSMUST00000163311 1288 ntAPPRIS P1 TSL 2 BASIC9.22□□□□□ -0.93
Hoxd3P09027 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC9.22□□□□□ -0.93
Hoxd3P09027 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC9.22□□□□□ -0.93
Hoxd3P09027 1700003H04Rik-206ENSMUST00000180162 1086 ntAPPRIS P5 TSL 5 BASIC9.22□□□□□ -0.93
Hoxd3P09027 4932441J04Rik-201ENSMUST00000180708 729 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Hoxd3P09027 Ighv1-48-201ENSMUST00000191795 294 ntBASIC9.22□□□□□ -0.93
Hoxd3P09027 Gm37599-201ENSMUST00000193067 489 ntBASIC9.22□□□□□ -0.93
Hoxd3P09027 Gm37306-201ENSMUST00000193447 1233 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Hoxd3P09027 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC9.22□□□□□ -0.93
Hoxd3P09027 Gm42682-201ENSMUST00000198349 1265 ntBASIC9.22□□□□□ -0.93
Hoxd3P09027 Gm19287-201ENSMUST00000203190 358 ntBASIC9.22□□□□□ -0.93
Hoxd3P09027 Gm44100-201ENSMUST00000204329 436 ntBASIC9.22□□□□□ -0.93
Hoxd3P09027 Gm18393-201ENSMUST00000208349 1131 ntBASIC9.22□□□□□ -0.93
Hoxd3P09027 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Hoxd3P09027 Gm2553-201ENSMUST00000215986 605 ntBASIC9.22□□□□□ -0.93
Hoxd3P09027 AC154361.1-201ENSMUST00000225694 745 ntBASIC9.22□□□□□ -0.93
Hoxd3P09027 AC156574.1-201ENSMUST00000227084 452 ntBASIC9.22□□□□□ -0.93
Hoxd3P09027 1700003H04Rik-201ENSMUST00000047110 1040 ntAPPRIS ALT2 TSL 5 BASIC9.22□□□□□ -0.93
Hoxd3P09027 Il17c-201ENSMUST00000050963 719 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Hoxd3P09027 Olfr829-201ENSMUST00000058411 966 ntAPPRIS P2 BASIC9.22□□□□□ -0.93
Hoxd3P09027 Vmn1r76-201ENSMUST00000058772 975 ntAPPRIS P2 BASIC9.22□□□□□ -0.93
Hoxd3P09027 Mill2-201ENSMUST00000072386 1121 ntAPPRIS P4 TSL 1 (best) BASIC9.22□□□□□ -0.93
Hoxd3P09027 Mir219a-1-201ENSMUST00000083621 110 ntBASIC9.22□□□□□ -0.93
Hoxd3P09027 Olfr1039-201ENSMUST00000099910 960 ntAPPRIS P1 BASIC9.22□□□□□ -0.93
Hoxd3P09027 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Hoxd3P09027 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Hoxd3P09027 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Hoxd3P09027 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Hoxd3P09027 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Hoxd3P09027 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC9.22□□□□□ -0.93
Hoxd3P09027 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Hoxd3P09027 Gm37891-201ENSMUST00000195585 1326 ntBASIC9.22□□□□□ -0.93
Hoxd3P09027 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC9.22□□□□□ -0.93
Hoxd3P09027 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Hoxd3P09027 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC9.22□□□□□ -0.93
Hoxd3P09027 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Hoxd3P09027 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC9.22□□□□□ -0.93
Hoxd3P09027 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Hoxd3P09027 E330011O21Rik-204ENSMUST00000210839 1361 ntTSL 5 BASIC9.22□□□□□ -0.93
Hoxd3P09027 Gm6189-201ENSMUST00000164487 2082 ntBASIC9.22□□□□□ -0.93
Hoxd3P09027 Gm44758-201ENSMUST00000206096 2068 ntBASIC9.22□□□□□ -0.93
Hoxd3P09027 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC9.22□□□□□ -0.93
Hoxd3P09027 Gpr179-201ENSMUST00000093942 9219 ntAPPRIS P1 TSL 5 BASIC9.22□□□□□ -0.93
Hoxd3P09027 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Hoxd3P09027 Olfr1112-202ENSMUST00000216772 1443 ntAPPRIS P1 TSL 5 BASIC9.22□□□□□ -0.93
Hoxd3P09027 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Hoxd3P09027 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC9.22□□□□□ -0.93
Hoxd3P09027 Nrap-204ENSMUST00000166203 5079 ntAPPRIS ALT2 TSL 5 BASIC9.22□□□□□ -0.93
Hoxd3P09027 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC9.22□□□□□ -0.93
Hoxd3P09027 Gm38187-201ENSMUST00000195609 4709 ntBASIC9.22□□□□□ -0.93
Hoxd3P09027 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
Hoxd3P09027 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC9.21□□□□□ -0.93
Hoxd3P09027 Vmn1r193-202ENSMUST00000227457 6429 ntAPPRIS P1 BASIC9.21□□□□□ -0.93
Hoxd3P09027 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
Hoxd3P09027 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC9.21□□□□□ -0.93
Hoxd3P09027 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
Hoxd3P09027 Dnm3-202ENSMUST00000086074 7523 ntAPPRIS ALT2 TSL 5 BASIC9.21□□□□□ -0.93
Hoxd3P09027 Togaram1-201ENSMUST00000066296 6372 ntAPPRIS P2 TSL 1 (best) BASIC9.21□□□□□ -0.93
Hoxd3P09027 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC9.21□□□□□ -0.93
Hoxd3P09027 Pcnt-201ENSMUST00000001179 9331 ntAPPRIS P2 TSL 2 BASIC9.21□□□□□ -0.93
Hoxd3P09027 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC9.21□□□□□ -0.93
Hoxd3P09027 Gm44441-201ENSMUST00000203642 2475 ntBASIC9.21□□□□□ -0.93
Hoxd3P09027 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC9.21□□□□□ -0.93
Hoxd3P09027 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC9.21□□□□□ -0.94
Hoxd3P09027 Pmp22-203ENSMUST00000108701 723 ntAPPRIS P1 TSL 3 BASIC9.21□□□□□ -0.94
Hoxd3P09027 Gm14263-201ENSMUST00000117955 746 ntBASIC9.21□□□□□ -0.94
Hoxd3P09027 Gm15004-201ENSMUST00000119192 630 ntBASIC9.21□□□□□ -0.94
Hoxd3P09027 Gm8215-201ENSMUST00000120627 990 ntBASIC9.21□□□□□ -0.94
Hoxd3P09027 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Hoxd3P09027 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Hoxd3P09027 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Hoxd3P09027 Gm7714-201ENSMUST00000169154 685 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Hoxd3P09027 Klrb1a-202ENSMUST00000171306 989 ntAPPRIS ALT2 TSL 1 (best) BASIC9.21□□□□□ -0.94
Hoxd3P09027 Gm17075-201ENSMUST00000171924 670 ntBASIC9.21□□□□□ -0.94
Hoxd3P09027 Vmn1r-ps78-201ENSMUST00000178185 924 ntBASIC9.21□□□□□ -0.94
Hoxd3P09027 Gm8546-201ENSMUST00000178288 1264 ntBASIC9.21□□□□□ -0.94
Hoxd3P09027 Vmn1r-ps76-201ENSMUST00000179492 924 ntBASIC9.21□□□□□ -0.94
Hoxd3P09027 Gm27005-201ENSMUST00000182783 921 ntBASIC9.21□□□□□ -0.94
Hoxd3P09027 Gm20574-201ENSMUST00000182867 917 ntBASIC9.21□□□□□ -0.94
Hoxd3P09027 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC9.21□□□□□ -0.94
Hoxd3P09027 Gm5733-201ENSMUST00000190232 939 ntBASIC9.21□□□□□ -0.94
Hoxd3P09027 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Hoxd3P09027 Gm37246-201ENSMUST00000192665 835 ntBASIC9.21□□□□□ -0.94
Hoxd3P09027 Gm38228-201ENSMUST00000193169 1293 ntBASIC9.21□□□□□ -0.94
Hoxd3P09027 Gm38154-201ENSMUST00000195444 340 ntBASIC9.21□□□□□ -0.94
Hoxd3P09027 Gm43947-201ENSMUST00000203019 959 ntBASIC9.21□□□□□ -0.94
Hoxd3P09027 Gm44830-201ENSMUST00000207667 584 ntBASIC9.21□□□□□ -0.94
Hoxd3P09027 Gm30978-201ENSMUST00000211581 1066 ntTSL 5 BASIC9.21□□□□□ -0.94
Hoxd3P09027 Gm45765-201ENSMUST00000212027 1035 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Hoxd3P09027 Olfr1245-201ENSMUST00000214870 1062 ntAPPRIS P1 BASIC9.21□□□□□ -0.94
Hoxd3P09027 Olfr1059-ps1-201ENSMUST00000215214 586 ntBASIC9.21□□□□□ -0.94
Hoxd3P09027 AC153929.1-201ENSMUST00000219009 303 ntBASIC9.21□□□□□ -0.94
Hoxd3P09027 Gm35615-201ENSMUST00000221255 719 ntTSL 3 BASIC9.21□□□□□ -0.94
Hoxd3P09027 Gm18026-201ENSMUST00000222789 727 ntBASIC9.21□□□□□ -0.94
Hoxd3P09027 CT009713.8-201ENSMUST00000225448 560 ntBASIC9.21□□□□□ -0.94
Hoxd3P09027 AC158142.3-201ENSMUST00000226230 675 ntBASIC9.21□□□□□ -0.94
Hoxd3P09027 AC154484.1-201ENSMUST00000227311 771 ntBASIC9.21□□□□□ -0.94
Hoxd3P09027 AC132918.1-201ENSMUST00000227877 925 ntBASIC9.21□□□□□ -0.94
Hoxd3P09027 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Retrieved 100 of 76,532 protein–RNA pairs in 46.6 ms