Protein–RNA interactions for Protein: P06344

H-2 class II histocompatibility antigen, A-U beta chain, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06344 Gm6560-201ENSMUST00000198588 1591 ntBASIC10.25□□□□□ -0.77
P06344 Kifc5b-201ENSMUST00000078961 2627 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
P06344 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
P06344 Gm45576-201ENSMUST00000210981 1322 ntTSL 5 BASIC10.25□□□□□ -0.77
P06344 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
P06344 Tnc-202ENSMUST00000107371 2928 ntTSL 5 BASIC10.25□□□□□ -0.77
P06344 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC10.25□□□□□ -0.77
P06344 Ces4a-201ENSMUST00000161289 2433 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
P06344 Vill-202ENSMUST00000074734 2440 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
P06344 Gm3836-201ENSMUST00000211377 1613 ntBASIC10.25□□□□□ -0.77
P06344 D6Ertd527e-201ENSMUST00000170124 2161 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
P06344 Arvcf-202ENSMUST00000115610 3829 ntAPPRIS ALT2 TSL 5 BASIC10.25□□□□□ -0.77
P06344 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
P06344 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
P06344 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
P06344 AC125374.1-201ENSMUST00000213573 1400 ntBASIC10.24□□□□□ -0.77
P06344 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
P06344 Lnx2-201ENSMUST00000016664 4557 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
P06344 Cyp11b1-201ENSMUST00000170259 3165 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
P06344 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
P06344 Gm43622-201ENSMUST00000200140 2019 ntBASIC10.24□□□□□ -0.77
P06344 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
P06344 Igsf3-201ENSMUST00000043983 7371 ntAPPRIS P2 TSL 1 (best) BASIC10.24□□□□□ -0.77
P06344 AC166836.1-201ENSMUST00000219933 1795 ntBASIC10.24□□□□□ -0.77
P06344 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
P06344 Tmem161a-201ENSMUST00000002413 3018 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
P06344 Nr2c1-202ENSMUST00000099343 2413 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
P06344 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
P06344 Spert-203ENSMUST00000165569 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
P06344 Gm38089-201ENSMUST00000193585 1514 ntBASIC10.24□□□□□ -0.77
P06344 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC10.24□□□□□ -0.77
P06344 Enpp5-201ENSMUST00000024756 2534 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
P06344 Abcg4-201ENSMUST00000034648 3476 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
P06344 Gngt2-205ENSMUST00000107711 563 ntAPPRIS P1 TSL 2 BASIC10.24□□□□□ -0.77
P06344 Eif5a-206ENSMUST00000108609 849 ntAPPRIS P1 TSL 3 BASIC10.24□□□□□ -0.77
P06344 Zfp157-203ENSMUST00000110912 886 ntTSL 3 BASIC10.24□□□□□ -0.77
P06344 Gm14662-201ENSMUST00000145552 734 ntTSL 3 BASIC10.24□□□□□ -0.77
P06344 2310057J18Rik-204ENSMUST00000152363 1043 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
P06344 Gm11944-201ENSMUST00000152576 873 ntTSL 3 BASIC10.24□□□□□ -0.77
P06344 Hmgn3-201ENSMUST00000161796 862 ntAPPRIS ALT1 TSL 1 (best) BASIC10.24□□□□□ -0.77
P06344 Gm16308-201ENSMUST00000162171 940 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
P06344 Gnpda2-207ENSMUST00000173927 1011 ntAPPRIS ALT1 TSL 5 BASIC10.24□□□□□ -0.77
P06344 3110080O07Rik-201ENSMUST00000193469 1021 ntBASIC10.24□□□□□ -0.77
P06344 Gm37634-201ENSMUST00000195700 650 ntTSL 3 BASIC10.24□□□□□ -0.77
P06344 Gm17590-202ENSMUST00000197881 1232 ntTSL 2 BASIC10.24□□□□□ -0.77
P06344 Dnajb6-212ENSMUST00000198694 505 ntTSL 3 BASIC10.24□□□□□ -0.77
P06344 Olfr1415-203ENSMUST00000204766 403 ntTSL 3 BASIC10.24□□□□□ -0.77
P06344 Gm44980-201ENSMUST00000205826 314 ntBASIC10.24□□□□□ -0.77
P06344 Gm9463-201ENSMUST00000206707 601 ntBASIC10.24□□□□□ -0.77
P06344 Gm8285-201ENSMUST00000208293 759 ntBASIC10.24□□□□□ -0.77
P06344 Ddo-207ENSMUST00000216830 806 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
P06344 C330004P14Rik-201ENSMUST00000218833 628 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
P06344 AC118639.2-201ENSMUST00000226289 223 ntBASIC10.24□□□□□ -0.77
P06344 Olfr1350-201ENSMUST00000070985 927 ntAPPRIS P1 BASIC10.24□□□□□ -0.77
P06344 Olfr311-201ENSMUST00000071625 927 ntAPPRIS P1 BASIC10.24□□□□□ -0.77
P06344 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
P06344 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC10.24□□□□□ -0.77
P06344 Sp2-202ENSMUST00000107623 2907 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
P06344 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC10.24□□□□□ -0.77
P06344 B4galt4-201ENSMUST00000023482 2304 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
P06344 Slc26a11-201ENSMUST00000050880 2695 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
P06344 Hpgd-201ENSMUST00000034026 1683 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
P06344 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
P06344 Ccdc97-201ENSMUST00000002683 3032 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
P06344 Col9a1-202ENSMUST00000088349 3059 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
P06344 Gm7964-201ENSMUST00000051522 1378 ntBASIC10.24□□□□□ -0.77
P06344 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
P06344 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
P06344 Tspan14-202ENSMUST00000224209 2477 ntAPPRIS P1 BASIC10.24□□□□□ -0.77
P06344 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
P06344 Hspa14-201ENSMUST00000027961 1795 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
P06344 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
P06344 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
P06344 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC10.24□□□□□ -0.77
P06344 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC10.24□□□□□ -0.77
P06344 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
P06344 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC10.23□□□□□ -0.77
P06344 4933406C10Rik-201ENSMUST00000180391 1451 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
P06344 Pif1-203ENSMUST00000134538 3395 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
P06344 Ing1-206ENSMUST00000210740 1866 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
P06344 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
P06344 Pcdh12-203ENSMUST00000194012 2702 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
P06344 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
P06344 Actr1a-201ENSMUST00000040270 2742 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
P06344 Gnb1l-204ENSMUST00000115601 3507 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
P06344 Gm17230-201ENSMUST00000171194 3942 ntBASIC10.23□□□□□ -0.77
P06344 Gm7841-201ENSMUST00000122108 1629 ntBASIC10.23□□□□□ -0.77
P06344 Spem2-201ENSMUST00000056941 1640 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
P06344 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
P06344 Mospd2-203ENSMUST00000112248 2487 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
P06344 Pla2g7-201ENSMUST00000024706 2097 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
P06344 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
P06344 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
P06344 Gm11667-201ENSMUST00000119828 486 ntBASIC10.23□□□□□ -0.77
P06344 Gm9089-201ENSMUST00000122027 526 ntBASIC10.23□□□□□ -0.77
P06344 Gm15985-201ENSMUST00000137731 343 ntTSL 3 BASIC10.23□□□□□ -0.77
P06344 Cdpf1-205ENSMUST00000150995 566 ntAPPRIS P1 TSL 3 BASIC10.23□□□□□ -0.77
P06344 Gm6485-201ENSMUST00000160676 439 ntBASIC10.23□□□□□ -0.77
P06344 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
P06344 Scgb1b19-201ENSMUST00000165813 418 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms