Protein–RNA interactions for Protein: P02831

Hoxa3, Homeobox protein Hox-A3, mousemouse

Predictions only

Length 443 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa3P02831 Gm12036-201ENSMUST00000120008 530 ntBASIC9.67□□□□□ -0.86
Hoxa3P02831 Gm14585-201ENSMUST00000120713 634 ntBASIC9.67□□□□□ -0.86
Hoxa3P02831 2310057J18Rik-204ENSMUST00000152363 1043 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Hoxa3P02831 Gm24844-201ENSMUST00000158679 127 ntBASIC9.67□□□□□ -0.86
Hoxa3P02831 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Hoxa3P02831 Gm20662-201ENSMUST00000176356 601 ntAPPRIS P5 TSL 3 BASIC9.67□□□□□ -0.86
Hoxa3P02831 Gm9463-201ENSMUST00000206707 601 ntBASIC9.67□□□□□ -0.86
Hoxa3P02831 Gm45441-202ENSMUST00000209301 1235 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Hoxa3P02831 Fxyd2-211ENSMUST00000216289 668 ntTSL 5 BASIC9.67□□□□□ -0.86
Hoxa3P02831 AC122876.1-201ENSMUST00000217619 825 ntBASIC9.67□□□□□ -0.86
Hoxa3P02831 Olfr462-201ENSMUST00000049743 936 ntAPPRIS P1 BASIC9.67□□□□□ -0.86
Hoxa3P02831 Gm21411-201ENSMUST00000049821 750 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Hoxa3P02831 Snora73b-201ENSMUST00000083419 205 ntBASIC9.67□□□□□ -0.86
Hoxa3P02831 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC9.67□□□□□ -0.86
Hoxa3P02831 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Hoxa3P02831 Kifc2-201ENSMUST00000004294 3143 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Hoxa3P02831 Mrgprd-201ENSMUST00000062163 3144 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Hoxa3P02831 Nefm-202ENSMUST00000111089 3680 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Hoxa3P02831 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC9.67□□□□□ -0.86
Hoxa3P02831 Cdnf-201ENSMUST00000036350 3013 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Hoxa3P02831 Eef2k-201ENSMUST00000047875 6580 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Hoxa3P02831 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC9.67□□□□□ -0.86
Hoxa3P02831 Dnmt3a-218ENSMUST00000174817 8737 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Hoxa3P02831 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Hoxa3P02831 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Hoxa3P02831 Gm38376-201ENSMUST00000195493 2253 ntBASIC9.67□□□□□ -0.86
Hoxa3P02831 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC9.67□□□□□ -0.86
Hoxa3P02831 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Hoxa3P02831 Gusb-201ENSMUST00000026613 2687 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Hoxa3P02831 Slc5a8-201ENSMUST00000020255 5331 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Hoxa3P02831 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Hoxa3P02831 Fnip1-201ENSMUST00000046835 6255 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Hoxa3P02831 Nrf1-219ENSMUST00000167972 1541 ntTSL 5 BASIC9.66□□□□□ -0.86
Hoxa3P02831 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Hoxa3P02831 Parp9-203ENSMUST00000114878 3548 ntAPPRIS P2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Hoxa3P02831 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC9.66□□□□□ -0.86
Hoxa3P02831 Gnb1l-202ENSMUST00000090086 3549 ntAPPRIS P3 TSL 1 (best) BASIC9.66□□□□□ -0.86
Hoxa3P02831 Tmem47-201ENSMUST00000026760 4007 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Hoxa3P02831 Cd163l1-201ENSMUST00000084460 3454 ntAPPRIS P2 TSL 5 BASIC9.66□□□□□ -0.86
Hoxa3P02831 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Hoxa3P02831 Grin1-208ENSMUST00000114318 3920 ntTSL 5 BASIC9.66□□□□□ -0.86
Hoxa3P02831 Adgrl3-210ENSMUST00000119788 5394 ntAPPRIS ALT2 TSL 5 BASIC9.66□□□□□ -0.86
Hoxa3P02831 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Hoxa3P02831 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Hoxa3P02831 Rnf183-203ENSMUST00000107455 1432 ntAPPRIS P1 TSL 3 BASIC9.66□□□□□ -0.86
Hoxa3P02831 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Hoxa3P02831 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Hoxa3P02831 Slc9a3-203ENSMUST00000221703 5118 ntAPPRIS ALT2 TSL 5 BASIC9.66□□□□□ -0.86
Hoxa3P02831 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Hoxa3P02831 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC9.66□□□□□ -0.86
Hoxa3P02831 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Hoxa3P02831 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Hoxa3P02831 G6pdx-201ENSMUST00000004327 2652 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Hoxa3P02831 Sertm1-201ENSMUST00000070342 3083 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Hoxa3P02831 Pdcd11-201ENSMUST00000072141 6041 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Hoxa3P02831 Gm43720-201ENSMUST00000159067 6411 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
Hoxa3P02831 Rps9-204ENSMUST00000108625 914 ntAPPRIS P1 TSL 2 BASIC9.66□□□□□ -0.86
Hoxa3P02831 Nudt1-205ENSMUST00000110827 744 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
Hoxa3P02831 Gm14314-201ENSMUST00000118225 1015 ntBASIC9.66□□□□□ -0.86
Hoxa3P02831 Gm15725-201ENSMUST00000119947 1090 ntBASIC9.66□□□□□ -0.86
Hoxa3P02831 Gm14441-201ENSMUST00000121960 540 ntBASIC9.66□□□□□ -0.86
Hoxa3P02831 Gm11587-201ENSMUST00000128274 1120 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Hoxa3P02831 Gm14235-201ENSMUST00000142445 366 ntTSL 3 BASIC9.66□□□□□ -0.86
Hoxa3P02831 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC9.66□□□□□ -0.86
Hoxa3P02831 Taf9-201ENSMUST00000167256 1230 ntAPPRIS P1 TSL 2 BASIC9.66□□□□□ -0.86
Hoxa3P02831 Gm29499-201ENSMUST00000189151 486 ntBASIC9.66□□□□□ -0.86
Hoxa3P02831 Gm28329-201ENSMUST00000191208 689 ntBASIC9.66□□□□□ -0.86
Hoxa3P02831 Gm29171-201ENSMUST00000191397 486 ntBASIC9.66□□□□□ -0.86
Hoxa3P02831 Gm17590-202ENSMUST00000197881 1232 ntTSL 2 BASIC9.66□□□□□ -0.86
Hoxa3P02831 Gm43186-201ENSMUST00000198130 824 ntBASIC9.66□□□□□ -0.86
Hoxa3P02831 4930447N08Rik-203ENSMUST00000198879 1157 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Hoxa3P02831 Gm45285-201ENSMUST00000210418 749 ntTSL 3 BASIC9.66□□□□□ -0.86
Hoxa3P02831 Olfr368-202ENSMUST00000217299 1200 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
Hoxa3P02831 Gm7940-201ENSMUST00000218195 769 ntBASIC9.66□□□□□ -0.86
Hoxa3P02831 Gm29676-202ENSMUST00000222409 364 ntTSL 2 BASIC9.66□□□□□ -0.86
Hoxa3P02831 AC112945.1-201ENSMUST00000226413 514 ntBASIC9.66□□□□□ -0.86
Hoxa3P02831 Pf4-201ENSMUST00000031320 588 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Hoxa3P02831 Plp2-201ENSMUST00000033486 1157 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Hoxa3P02831 Tnfsf13b-201ENSMUST00000033892 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Hoxa3P02831 Sept4-203ENSMUST00000107960 1653 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Hoxa3P02831 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC9.66□□□□□ -0.86
Hoxa3P02831 Zfp629-201ENSMUST00000058038 6120 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Hoxa3P02831 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Hoxa3P02831 Ppp1r16b-203ENSMUST00000103116 6370 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
Hoxa3P02831 Togaram1-201ENSMUST00000066296 6372 ntAPPRIS P2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Hoxa3P02831 Gtf2ird1-203ENSMUST00000100650 3487 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Hoxa3P02831 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Hoxa3P02831 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Hoxa3P02831 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Hoxa3P02831 Ranbp10-201ENSMUST00000041400 5308 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Hoxa3P02831 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Hoxa3P02831 Nsl1-202ENSMUST00000078259 4879 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Hoxa3P02831 Abca3-202ENSMUST00000079594 6380 ntAPPRIS P2 TSL 5 BASIC9.66□□□□□ -0.86
Hoxa3P02831 Lrrn4-201ENSMUST00000049787 3715 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Hoxa3P02831 Fut2-201ENSMUST00000069800 2955 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Hoxa3P02831 Olfr1344-202ENSMUST00000218906 2590 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
Hoxa3P02831 Sp2-202ENSMUST00000107623 2907 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Hoxa3P02831 Sorbs1-203ENSMUST00000165212 2175 ntAPPRIS ALT2 TSL 5 BASIC9.65□□□□□ -0.86
Hoxa3P02831 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Hoxa3P02831 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 209.2 ms