Protein–RNA interactions for Protein: O89079

Cope, Coatomer subunit epsilon, mousemouse

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopeO89079 Derl2-206ENSMUST00000143850 3666 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
CopeO89079 Limd1-201ENSMUST00000026269 4848 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
CopeO89079 Tnxb-201ENSMUST00000087399 12209 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
CopeO89079 Slc43a1-204ENSMUST00000121114 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
CopeO89079 Pdp2-201ENSMUST00000059588 5692 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
CopeO89079 Brd1-202ENSMUST00000109380 3259 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
CopeO89079 Gm28774-201ENSMUST00000187087 1498 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
CopeO89079 Esco1-201ENSMUST00000025142 4433 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
CopeO89079 Zmym3-209ENSMUST00000121520 5564 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
CopeO89079 Gm20755-201ENSMUST00000196893 1827 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
CopeO89079 Slc20a1-201ENSMUST00000028880 3316 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
CopeO89079 Nlrp6-201ENSMUST00000106045 3823 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
CopeO89079 Ddx54-201ENSMUST00000031598 4322 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
CopeO89079 Zfp462-202ENSMUST00000079605 4684 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
CopeO89079 Pfkfb2-208ENSMUST00000187089 1690 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
CopeO89079 Gm45234-201ENSMUST00000129411 4359 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
CopeO89079 Pou6f1-201ENSMUST00000058274 2523 ntTSL 2 BASIC11.81□□□□□ -0.52
CopeO89079 Ints10-201ENSMUST00000034328 4201 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
CopeO89079 Cage1-201ENSMUST00000074969 2856 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
CopeO89079 1700017B05Rik-202ENSMUST00000213199 3722 ntAPPRIS ALT2 TSL 2 BASIC11.81□□□□□ -0.52
CopeO89079 Map7d2-202ENSMUST00000112470 1350 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
CopeO89079 Mov10l1-203ENSMUST00000146993 4133 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
CopeO89079 Dock6-207ENSMUST00000217336 6880 ntAPPRIS P2 TSL 5 BASIC11.8□□□□□ -0.52
CopeO89079 Nmt2-201ENSMUST00000081932 4461 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
CopeO89079 Gm807-201ENSMUST00000181742 1723 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
CopeO89079 Syt11-203ENSMUST00000107505 5020 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CopeO89079 Cxcl12-203ENSMUST00000112871 3132 ntAPPRIS P4 TSL 1 (best) BASIC11.8□□□□□ -0.52
CopeO89079 Ndor1-201ENSMUST00000100329 4517 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
CopeO89079 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
CopeO89079 Ankrd55-202ENSMUST00000056047 1556 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
CopeO89079 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CopeO89079 Gm26640-201ENSMUST00000180809 3524 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
CopeO89079 AC125409.1-201ENSMUST00000223213 3370 ntBASIC11.8□□□□□ -0.52
CopeO89079 Ptpru-202ENSMUST00000097860 3365 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
CopeO89079 C230014O12Rik-201ENSMUST00000134921 2668 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
CopeO89079 Mtf1-202ENSMUST00000106193 7554 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
CopeO89079 Isl1-201ENSMUST00000036060 2516 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CopeO89079 Gm22133-201ENSMUST00000102082 109 ntBASIC11.8□□□□□ -0.52
CopeO89079 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CopeO89079 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
CopeO89079 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CopeO89079 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
CopeO89079 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
CopeO89079 Gm8885-201ENSMUST00000189382 598 ntBASIC11.8□□□□□ -0.52
CopeO89079 Ighv4-2-201ENSMUST00000192975 362 ntBASIC11.8□□□□□ -0.52
CopeO89079 Gm44651-201ENSMUST00000207343 372 ntBASIC11.8□□□□□ -0.52
CopeO89079 Gm7940-201ENSMUST00000218195 769 ntBASIC11.8□□□□□ -0.52
CopeO89079 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
CopeO89079 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
CopeO89079 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
CopeO89079 Wars-204ENSMUST00000161154 1824 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
CopeO89079 Platr6-201ENSMUST00000180731 1818 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
CopeO89079 Adcyap1r1-204ENSMUST00000165857 1491 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
CopeO89079 Lrrc55-201ENSMUST00000099930 2217 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CopeO89079 Poldip3-202ENSMUST00000100375 3157 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
CopeO89079 Thbs4-201ENSMUST00000022213 3198 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CopeO89079 Csgalnact1-203ENSMUST00000130214 3029 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CopeO89079 Spert-203ENSMUST00000165569 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
CopeO89079 Gm45199-201ENSMUST00000207640 1507 ntBASIC11.8□□□□□ -0.52
CopeO89079 Gm5833-202ENSMUST00000190707 1932 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
CopeO89079 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC11.8□□□□□ -0.52
CopeO89079 Pou1f1-201ENSMUST00000004964 1773 ntTSL 5 BASIC11.79□□□□□ -0.52
CopeO89079 Btnl4-201ENSMUST00000065841 1761 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
CopeO89079 Tpd52l2-202ENSMUST00000069712 1799 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
CopeO89079 Cpne9-201ENSMUST00000041203 2777 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
CopeO89079 Gm28042-203ENSMUST00000156805 2844 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
CopeO89079 Drc7-201ENSMUST00000058479 2832 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
CopeO89079 Csnk1a1-204ENSMUST00000165123 4083 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
CopeO89079 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
CopeO89079 Samd4b-201ENSMUST00000040531 4349 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
CopeO89079 Gm9544-201ENSMUST00000223349 2482 ntBASIC11.79□□□□□ -0.52
CopeO89079 Gm26660-202ENSMUST00000223620 4112 ntBASIC11.79□□□□□ -0.52
CopeO89079 Cit-201ENSMUST00000051704 9514 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
CopeO89079 Srsf6-203ENSMUST00000130411 3527 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
CopeO89079 Adam12-201ENSMUST00000067680 7675 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
CopeO89079 Rhbdf2-202ENSMUST00000103029 3593 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
CopeO89079 Robo1-201ENSMUST00000023600 7563 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
CopeO89079 Fkbp15-203ENSMUST00000098033 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
CopeO89079 Madd-213ENSMUST00000111376 5927 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
CopeO89079 Madd-206ENSMUST00000099725 5905 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
CopeO89079 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
CopeO89079 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC11.79□□□□□ -0.52
CopeO89079 Gm8062-201ENSMUST00000139696 444 ntBASIC11.79□□□□□ -0.52
CopeO89079 Gm14198-201ENSMUST00000153208 948 ntTSL 2 BASIC11.79□□□□□ -0.52
CopeO89079 Gm2991-201ENSMUST00000173338 480 ntBASIC11.79□□□□□ -0.52
CopeO89079 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
CopeO89079 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
CopeO89079 Gm4310-201ENSMUST00000177847 889 ntBASIC11.79□□□□□ -0.52
CopeO89079 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
CopeO89079 Gm6621-201ENSMUST00000193251 772 ntBASIC11.79□□□□□ -0.52
CopeO89079 Gm37634-201ENSMUST00000195700 650 ntTSL 3 BASIC11.79□□□□□ -0.52
CopeO89079 Gm4157-201ENSMUST00000211647 679 ntBASIC11.79□□□□□ -0.52
CopeO89079 Aprt-ps-201ENSMUST00000212311 505 ntBASIC11.79□□□□□ -0.52
CopeO89079 Gm7183-201ENSMUST00000213870 1005 ntBASIC11.79□□□□□ -0.52
CopeO89079 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC11.79□□□□□ -0.52
CopeO89079 Gm7293-201ENSMUST00000216682 1007 ntBASIC11.79□□□□□ -0.52
CopeO89079 AC102569.1-201ENSMUST00000221563 685 ntBASIC11.79□□□□□ -0.52
CopeO89079 Olfr323-201ENSMUST00000070804 972 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
CopeO89079 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
CopeO89079 Eps8l1-204ENSMUST00000163893 3868 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 50 ms