Protein–RNA interactions for Protein: O89029

Matn4, Matrilin-4, mousemouse

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Matn4O89029 Gm26778-201ENSMUST00000181443 3805 ntTSL 5 BASIC10.82□□□□□ -0.68
Matn4O89029 1700008K24Rik-201ENSMUST00000185974 833 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Matn4O89029 AA914427-201ENSMUST00000193194 1166 ntBASIC10.82□□□□□ -0.68
Matn4O89029 AY702102-202ENSMUST00000194651 1173 ntBASIC10.82□□□□□ -0.68
Matn4O89029 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC10.82□□□□□ -0.68
Matn4O89029 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Matn4O89029 AC125070.1-201ENSMUST00000223523 555 ntTSL 5 BASIC10.82□□□□□ -0.68
Matn4O89029 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Matn4O89029 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Matn4O89029 Gm8399-201ENSMUST00000082300 1117 ntBASIC10.82□□□□□ -0.68
Matn4O89029 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Matn4O89029 Tcof1-204ENSMUST00000176630 4529 ntAPPRIS P3 TSL 5 BASIC10.82□□□□□ -0.68
Matn4O89029 Bco1-203ENSMUST00000176860 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Matn4O89029 Gm11033-203ENSMUST00000156185 2321 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Matn4O89029 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Matn4O89029 Stk17b-201ENSMUST00000027263 3293 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Matn4O89029 Ahnak2-201ENSMUST00000101010 2821 ntAPPRIS ALT2 BASIC10.82□□□□□ -0.68
Matn4O89029 Elmod3-201ENSMUST00000070990 2122 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Matn4O89029 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Matn4O89029 Derl2-206ENSMUST00000143850 3666 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Matn4O89029 Crot-201ENSMUST00000003720 2996 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Matn4O89029 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC10.82□□□□□ -0.68
Matn4O89029 Rasal1-201ENSMUST00000031606 3212 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Matn4O89029 Nlrp6-201ENSMUST00000106045 3823 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Matn4O89029 Olfr279-203ENSMUST00000216822 5605 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Matn4O89029 Cobl-202ENSMUST00000109650 5271 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Matn4O89029 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Matn4O89029 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC10.82□□□□□ -0.68
Matn4O89029 Nek1-208ENSMUST00000211256 4810 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Matn4O89029 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Matn4O89029 3830406C13Rik-209ENSMUST00000224389 2444 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Matn4O89029 Oxct1-201ENSMUST00000110690 3527 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Matn4O89029 Ccdc129-201ENSMUST00000044729 3431 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Matn4O89029 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Matn4O89029 Gm43908-201ENSMUST00000205074 1472 ntBASIC10.81□□□□□ -0.68
Matn4O89029 Arc-202ENSMUST00000110009 3054 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Matn4O89029 Arc-201ENSMUST00000023268 3055 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Matn4O89029 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Matn4O89029 Cep128-210ENSMUST00000141429 4807 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Matn4O89029 Gm45532-201ENSMUST00000210342 3620 ntBASIC10.81□□□□□ -0.68
Matn4O89029 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Matn4O89029 Dyrk4-202ENSMUST00000078521 2252 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Matn4O89029 Zfp37-206ENSMUST00000222050 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Matn4O89029 B3glct-201ENSMUST00000100404 4570 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Matn4O89029 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Matn4O89029 Nfx1-203ENSMUST00000098143 4594 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Matn4O89029 Sugp1-201ENSMUST00000011450 2681 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Matn4O89029 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Matn4O89029 Gm10807-201ENSMUST00000177134 795 ntBASIC10.81□□□□□ -0.68
Matn4O89029 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Matn4O89029 Gm5342-201ENSMUST00000181982 1003 ntBASIC10.81□□□□□ -0.68
Matn4O89029 Gapdh-ps14-201ENSMUST00000183246 1002 ntBASIC10.81□□□□□ -0.68
Matn4O89029 Gm8856-201ENSMUST00000185254 1144 ntBASIC10.81□□□□□ -0.68
Matn4O89029 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Matn4O89029 Ighv5-7-201ENSMUST00000192302 244 ntBASIC10.81□□□□□ -0.68
Matn4O89029 AY036118-201ENSMUST00000200021 923 ntBASIC10.81□□□□□ -0.68
Matn4O89029 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC10.81□□□□□ -0.68
Matn4O89029 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Matn4O89029 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Matn4O89029 H3f3a-201ENSMUST00000081026 888 ntAPPRIS ALT1 TSL 5 BASIC10.81□□□□□ -0.68
Matn4O89029 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Matn4O89029 D930020B18Rik-201ENSMUST00000120642 3335 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Matn4O89029 Azin1-203ENSMUST00000110329 4217 ntAPPRIS P1 TSL 2 BASIC10.81□□□□□ -0.68
Matn4O89029 Slc38a4-202ENSMUST00000166223 1908 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Matn4O89029 Clp1-201ENSMUST00000028475 1912 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Matn4O89029 Nynrin-201ENSMUST00000100529 6990 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Matn4O89029 Tmem231-201ENSMUST00000034429 2984 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Matn4O89029 Setd1a-201ENSMUST00000047075 6487 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Matn4O89029 Ptpru-202ENSMUST00000097860 3365 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Matn4O89029 Prrc2b-202ENSMUST00000069817 10671 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Matn4O89029 Pisd-203ENSMUST00000120591 2491 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Matn4O89029 Slc35a4-201ENSMUST00000036158 2462 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Matn4O89029 Irf5-202ENSMUST00000163511 2241 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Matn4O89029 1810053B23Rik-205ENSMUST00000188056 1592 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Matn4O89029 Wnt5a-201ENSMUST00000063465 7010 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Matn4O89029 Fbxo39-201ENSMUST00000108504 1708 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Matn4O89029 Srrm2-201ENSMUST00000088621 8564 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Matn4O89029 Srp54b-202ENSMUST00000218879 3642 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Matn4O89029 Nol6-201ENSMUST00000030138 4599 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Matn4O89029 Ces3b-202ENSMUST00000093221 2403 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Matn4O89029 Bcar1-203ENSMUST00000212349 3116 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Matn4O89029 Gmppb-202ENSMUST00000112295 2702 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Matn4O89029 Pkp4-201ENSMUST00000037903 4378 ntTSL 5 BASIC10.8□□□□□ -0.68
Matn4O89029 Mob3b-201ENSMUST00000102975 6030 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Matn4O89029 Smc4-202ENSMUST00000107803 3983 ntTSL 5 BASIC10.8□□□□□ -0.68
Matn4O89029 Fam53b-207ENSMUST00000106169 4536 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Matn4O89029 Chmp1b-202ENSMUST00000210564 2490 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Matn4O89029 Kif1a-203ENSMUST00000171556 5391 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Matn4O89029 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Matn4O89029 Sept9-205ENSMUST00000106354 3869 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Matn4O89029 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Matn4O89029 Ano10-203ENSMUST00000214409 2384 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Matn4O89029 Hsh2d-201ENSMUST00000072097 1824 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Matn4O89029 Elf2-206ENSMUST00000163748 2656 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Matn4O89029 Rplp2-202ENSMUST00000106003 449 ntAPPRIS P1 TSL 2 BASIC10.8□□□□□ -0.68
Matn4O89029 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Matn4O89029 Gm13392-201ENSMUST00000117708 150 ntBASIC10.8□□□□□ -0.68
Matn4O89029 Gm8876-201ENSMUST00000120768 1122 ntBASIC10.8□□□□□ -0.68
Matn4O89029 Gm12953-201ENSMUST00000138426 751 ntTSL 2 BASIC10.8□□□□□ -0.68
Matn4O89029 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 116.8 ms