Protein–RNA interactions for Protein: O70481

Ubr1, E3 ubiquitin-protein ligase UBR1, mousemouse

Predictions only

Length 1,757 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1O70481 Plscr1-202ENSMUST00000186364 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ubr1O70481 Frg2f1-201ENSMUST00000079611 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ubr1O70481 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Ubr1O70481 Gm37931-201ENSMUST00000194686 2866 ntBASIC14.63□□□□□ -0.07
Ubr1O70481 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ubr1O70481 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ubr1O70481 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ubr1O70481 Focad-202ENSMUST00000107147 1177 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Ubr1O70481 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ubr1O70481 Gm12426-201ENSMUST00000153083 371 ntTSL 5 BASIC14.63□□□□□ -0.07
Ubr1O70481 Gm13449-201ENSMUST00000153559 1231 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Ubr1O70481 Gm25872-201ENSMUST00000177784 100 ntBASIC14.63□□□□□ -0.07
Ubr1O70481 Gm26906-201ENSMUST00000180523 1228 ntTSL 5 BASIC14.63□□□□□ -0.07
Ubr1O70481 Gm28651-201ENSMUST00000185335 644 ntTSL 3 BASIC14.63□□□□□ -0.07
Ubr1O70481 Gm43667-201ENSMUST00000198616 1095 ntBASIC14.63□□□□□ -0.07
Ubr1O70481 Tbc1d24-211ENSMUST00000201583 893 ntTSL 5 BASIC14.63□□□□□ -0.07
Ubr1O70481 Gm7192-201ENSMUST00000210793 1137 ntBASIC14.63□□□□□ -0.07
Ubr1O70481 Nkain2-205ENSMUST00000219125 1166 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Ubr1O70481 Gm9791-201ENSMUST00000060997 447 ntBASIC14.63□□□□□ -0.07
Ubr1O70481 Rab7-201ENSMUST00000095048 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ubr1O70481 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ubr1O70481 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC14.63□□□□□ -0.07
Ubr1O70481 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ubr1O70481 Supt3-201ENSMUST00000050630 1508 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ubr1O70481 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ubr1O70481 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ubr1O70481 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Ubr1O70481 Os9-202ENSMUST00000164259 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ubr1O70481 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC14.63□□□□□ -0.07
Ubr1O70481 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Ubr1O70481 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ubr1O70481 Gm19027-201ENSMUST00000187291 1355 ntBASIC14.63□□□□□ -0.07
Ubr1O70481 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ubr1O70481 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC14.63□□□□□ -0.07
Ubr1O70481 Igtp-201ENSMUST00000035266 2022 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ubr1O70481 Lrit3-201ENSMUST00000179187 1683 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Ubr1O70481 Olfr29-ps1-201ENSMUST00000117959 963 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Ubr1O70481 Gm13827-201ENSMUST00000148801 372 ntBASIC14.62□□□□□ -0.07
Ubr1O70481 Gm25604-201ENSMUST00000158359 133 ntBASIC14.62□□□□□ -0.07
Ubr1O70481 Gm6794-201ENSMUST00000203829 457 ntBASIC14.62□□□□□ -0.07
Ubr1O70481 Gm44953-201ENSMUST00000208745 1286 ntBASIC14.62□□□□□ -0.07
Ubr1O70481 Gm6331-201ENSMUST00000217890 450 ntBASIC14.62□□□□□ -0.07
Ubr1O70481 Timm9-210ENSMUST00000221892 734 ntTSL 5 BASIC14.62□□□□□ -0.07
Ubr1O70481 Spink2-201ENSMUST00000065216 631 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ubr1O70481 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC14.62□□□□□ -0.07
Ubr1O70481 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ubr1O70481 Gm38192-201ENSMUST00000194364 1847 ntBASIC14.62□□□□□ -0.07
Ubr1O70481 Dusp22-202ENSMUST00000095914 3015 ntAPPRIS P4 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ubr1O70481 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ubr1O70481 Gm42480-201ENSMUST00000198434 2595 ntBASIC14.62□□□□□ -0.07
Ubr1O70481 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ubr1O70481 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC14.62□□□□□ -0.07
Ubr1O70481 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Ubr1O70481 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC14.62□□□□□ -0.07
Ubr1O70481 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Ubr1O70481 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
Ubr1O70481 Msantd1-201ENSMUST00000050535 2793 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ubr1O70481 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Ubr1O70481 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Ubr1O70481 Scpep1-201ENSMUST00000000287 2097 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ubr1O70481 Ncbp2-202ENSMUST00000115178 515 ntTSL 5 BASIC14.62□□□□□ -0.07
Ubr1O70481 7330404K18Rik-201ENSMUST00000125558 487 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Ubr1O70481 Cnfn-202ENSMUST00000167591 698 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ubr1O70481 Ppy-202ENSMUST00000170554 487 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ubr1O70481 Gm8601-201ENSMUST00000182096 909 ntBASIC14.62□□□□□ -0.07
Ubr1O70481 Gm7069-201ENSMUST00000182418 1008 ntBASIC14.62□□□□□ -0.07
Ubr1O70481 1700001J11Rik-201ENSMUST00000185917 759 ntBASIC14.62□□□□□ -0.07
Ubr1O70481 Gm19918-201ENSMUST00000194858 400 ntBASIC14.62□□□□□ -0.07
Ubr1O70481 Lsm8-204ENSMUST00000201141 503 ntTSL 3 BASIC14.62□□□□□ -0.07
Ubr1O70481 Gm43460-201ENSMUST00000202491 1057 ntBASIC14.62□□□□□ -0.07
Ubr1O70481 Saa-ps-201ENSMUST00000211148 320 ntBASIC14.62□□□□□ -0.07
Ubr1O70481 AC134793.1-202ENSMUST00000227444 803 ntBASIC14.62□□□□□ -0.07
Ubr1O70481 Gm8894-201ENSMUST00000074642 666 ntBASIC14.62□□□□□ -0.07
Ubr1O70481 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC14.62□□□□□ -0.07
Ubr1O70481 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC14.62□□□□□ -0.07
Ubr1O70481 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
Ubr1O70481 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Ubr1O70481 Pde4c-201ENSMUST00000034307 3203 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Ubr1O70481 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ubr1O70481 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Ubr1O70481 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ubr1O70481 Kcnk10-201ENSMUST00000110113 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ubr1O70481 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Ubr1O70481 Prg4-201ENSMUST00000006171 1869 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Ubr1O70481 Pmp22-201ENSMUST00000018361 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ubr1O70481 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ubr1O70481 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC14.61□□□□□ -0.07
Ubr1O70481 Cars-202ENSMUST00000105909 2462 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ubr1O70481 Galntl6-202ENSMUST00000098757 2210 ntTSL 5 BASIC14.61□□□□□ -0.07
Ubr1O70481 Snx27-208ENSMUST00000200642 1308 ntTSL 5 BASIC14.61□□□□□ -0.07
Ubr1O70481 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC14.61□□□□□ -0.07
Ubr1O70481 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ubr1O70481 Slc10a1-202ENSMUST00000218162 1749 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ubr1O70481 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ubr1O70481 Unc119-202ENSMUST00000100755 933 ntTSL 2 BASIC14.61□□□□□ -0.07
Ubr1O70481 Gm12463-201ENSMUST00000118271 849 ntBASIC14.61□□□□□ -0.07
Ubr1O70481 Smim6-201ENSMUST00000132961 978 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ubr1O70481 Aamdc-207ENSMUST00000138060 467 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Ubr1O70481 2610016A17Rik-201ENSMUST00000185211 474 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Ubr1O70481 Scnn1g-201ENSMUST00000000221 2991 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms