Protein–RNA interactions for Protein: O54965

Rnf13, E3 ubiquitin-protein ligase RNF13, mousemouse

Predictions only

Length 381 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf13O54965 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Rnf13O54965 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Rnf13O54965 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Rnf13O54965 Vmn1r222-201ENSMUST00000077116 1054 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
Rnf13O54965 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
Rnf13O54965 Fgl2-201ENSMUST00000035799 3788 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Rnf13O54965 Matn2-205ENSMUST00000227759 3569 ntAPPRIS ALT2 BASIC10.39□□□□□ -0.75
Rnf13O54965 Gm13556-201ENSMUST00000132692 1412 ntTSL 3 BASIC10.39□□□□□ -0.75
Rnf13O54965 Gm19299-202ENSMUST00000215724 1435 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Rnf13O54965 Csnk1a1-204ENSMUST00000165123 4083 ntAPPRIS P2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Rnf13O54965 Dab2-211ENSMUST00000161812 2710 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Rnf13O54965 Enam-201ENSMUST00000031222 5483 ntAPPRIS P2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Rnf13O54965 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
Rnf13O54965 Neu2-206ENSMUST00000166259 1596 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
Rnf13O54965 Ciita-201ENSMUST00000023147 5254 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Rnf13O54965 Zeb1-201ENSMUST00000025081 5805 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Rnf13O54965 Siglec1-203ENSMUST00000110227 5790 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Rnf13O54965 Gm9200-201ENSMUST00000118513 1354 ntBASIC10.39□□□□□ -0.75
Rnf13O54965 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Rnf13O54965 Slc10a7-201ENSMUST00000034111 3595 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Rnf13O54965 Acad9-201ENSMUST00000011492 3930 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Rnf13O54965 Tox4-201ENSMUST00000022766 5350 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
Rnf13O54965 Igf1-201ENSMUST00000062862 2292 ntTSL 2 BASIC10.38□□□□□ -0.75
Rnf13O54965 Slc38a8-201ENSMUST00000036748 2623 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Rnf13O54965 Gm5124-202ENSMUST00000132683 2083 ntBASIC10.38□□□□□ -0.75
Rnf13O54965 Asb15-201ENSMUST00000031696 2088 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Rnf13O54965 AC124433.1-202ENSMUST00000224762 1535 ntBASIC10.38□□□□□ -0.75
Rnf13O54965 5330417C22Rik-202ENSMUST00000106625 5836 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
Rnf13O54965 Saxo2-201ENSMUST00000056728 2783 ntAPPRIS P2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Rnf13O54965 Wdr78-203ENSMUST00000106868 4045 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
Rnf13O54965 Alas2-202ENSMUST00000112715 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Rnf13O54965 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
Rnf13O54965 Rps6ka1-209ENSMUST00000174481 2228 ntTSL 5 BASIC10.38□□□□□ -0.75
Rnf13O54965 Krt75-201ENSMUST00000042957 3266 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Rnf13O54965 Rps9-202ENSMUST00000108623 1347 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Rnf13O54965 Tmem8b-209ENSMUST00000167153 4101 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Rnf13O54965 Gm20755-201ENSMUST00000196893 1827 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Rnf13O54965 Ehd2-201ENSMUST00000098799 5119 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Rnf13O54965 Txlna-201ENSMUST00000046425 4569 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Rnf13O54965 Cntd1-201ENSMUST00000103107 2335 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Rnf13O54965 Sp6-201ENSMUST00000047997 3546 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Rnf13O54965 Gm28042-203ENSMUST00000156805 2844 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
Rnf13O54965 Chrne-201ENSMUST00000014753 1616 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
Rnf13O54965 Cntn4-203ENSMUST00000113258 2464 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Rnf13O54965 Ift46-201ENSMUST00000002099 4169 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Rnf13O54965 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Rnf13O54965 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
Rnf13O54965 Gm14726-201ENSMUST00000120623 896 ntBASIC10.38□□□□□ -0.75
Rnf13O54965 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC10.38□□□□□ -0.75
Rnf13O54965 Gm3329-201ENSMUST00000159873 556 ntBASIC10.38□□□□□ -0.75
Rnf13O54965 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC10.38□□□□□ -0.75
Rnf13O54965 Gm6621-201ENSMUST00000193251 772 ntBASIC10.38□□□□□ -0.75
Rnf13O54965 AY702102-202ENSMUST00000194651 1173 ntBASIC10.38□□□□□ -0.75
Rnf13O54965 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
Rnf13O54965 Gm45598-202ENSMUST00000210719 986 ntBASIC10.38□□□□□ -0.75
Rnf13O54965 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC10.38□□□□□ -0.75
Rnf13O54965 AC159896.2-201ENSMUST00000214753 269 ntBASIC10.38□□□□□ -0.75
Rnf13O54965 Gm9368-201ENSMUST00000219348 831 ntBASIC10.38□□□□□ -0.75
Rnf13O54965 Crot-201ENSMUST00000003720 2996 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Rnf13O54965 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Rnf13O54965 Gm5705-201ENSMUST00000066241 711 ntBASIC10.38□□□□□ -0.75
Rnf13O54965 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC10.38□□□□□ -0.75
Rnf13O54965 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC10.38□□□□□ -0.75
Rnf13O54965 Ddx54-201ENSMUST00000031598 4322 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Rnf13O54965 Mrrf-201ENSMUST00000028250 2623 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Rnf13O54965 Olfr582-202ENSMUST00000210119 1787 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
Rnf13O54965 Gm13684-201ENSMUST00000152569 2264 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Rnf13O54965 Gm1840-201ENSMUST00000051687 1432 ntBASIC10.38□□□□□ -0.75
Rnf13O54965 Vamp1-202ENSMUST00000063588 1400 ntTSL 2 BASIC10.38□□□□□ -0.75
Rnf13O54965 Parp11-202ENSMUST00000112191 3414 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Rnf13O54965 Kng2-203ENSMUST00000115349 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Rnf13O54965 Gm37122-201ENSMUST00000195313 1567 ntBASIC10.38□□□□□ -0.75
Rnf13O54965 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Rnf13O54965 Smtn-210ENSMUST00000170588 3386 ntAPPRIS P2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Rnf13O54965 Platr25-207ENSMUST00000222477 1705 ntTSL 5 BASIC10.38□□□□□ -0.75
Rnf13O54965 Dusp22-202ENSMUST00000095914 3015 ntAPPRIS P4 TSL 1 (best) BASIC10.38□□□□□ -0.75
Rnf13O54965 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Rnf13O54965 Tns1-209ENSMUST00000187691 2813 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Rnf13O54965 Esco1-201ENSMUST00000025142 4433 ntAPPRIS P2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Rnf13O54965 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC10.38□□□□□ -0.75
Rnf13O54965 Nfx1-203ENSMUST00000098143 4594 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Rnf13O54965 Cdc42ep4-202ENSMUST00000106616 3405 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Rnf13O54965 Smarca2-216ENSMUST00000176769 5703 ntTSL 5 BASIC10.37□□□□□ -0.75
Rnf13O54965 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Rnf13O54965 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Rnf13O54965 Shc1-210ENSMUST00000191485 3154 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
Rnf13O54965 Zfp30-202ENSMUST00000122387 3342 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Rnf13O54965 Lhx9-204ENSMUST00000112026 2065 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Rnf13O54965 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
Rnf13O54965 Tmem231-201ENSMUST00000034429 2984 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Rnf13O54965 Gm43064-201ENSMUST00000199710 3144 ntAPPRIS P1 TSL 2 BASIC10.37□□□□□ -0.75
Rnf13O54965 Dhx38-201ENSMUST00000042601 4463 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Rnf13O54965 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC10.37□□□□□ -0.75
Rnf13O54965 Gm14109-201ENSMUST00000118814 309 ntBASIC10.37□□□□□ -0.75
Rnf13O54965 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Rnf13O54965 Kcnmb3-201ENSMUST00000164954 1715 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
Rnf13O54965 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Rnf13O54965 Gm6548-201ENSMUST00000167498 1165 ntBASIC10.37□□□□□ -0.75
Rnf13O54965 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC10.37□□□□□ -0.75
Rnf13O54965 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 50.3 ms