Protein–RNA interactions for Protein: O54941

Smarce1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1, mousemouse

Known RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarce1O54941 Pcdh12-203ENSMUST00000194012 2702 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Smarce1O54941 H2-T24-201ENSMUST00000113760 2182 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
Smarce1O54941 Cep76-201ENSMUST00000097542 3979 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Smarce1O54941 Gm15958-202ENSMUST00000153479 2087 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Smarce1O54941 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Smarce1O54941 Kat7-203ENSMUST00000103159 3248 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Smarce1O54941 B4galt4-201ENSMUST00000023482 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Smarce1O54941 Dpysl4-201ENSMUST00000026551 3552 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Smarce1O54941 Dclk2-202ENSMUST00000191752 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Smarce1O54941 Gm5846-201ENSMUST00000193146 1414 ntBASIC13.63□□□□□ -0.23
Smarce1O54941 Zfp608-201ENSMUST00000064763 6112 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Smarce1O54941 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Smarce1O54941 Nme1-203ENSMUST00000135884 3181 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Smarce1O54941 Fcrla-201ENSMUST00000046322 1679 ntAPPRIS P4 TSL 1 (best) BASIC13.63□□□□□ -0.23
Smarce1O54941 Gm44573-201ENSMUST00000191753 2370 ntBASIC13.63□□□□□ -0.23
Smarce1O54941 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC13.62□□□□□ -0.23
Smarce1O54941 Pls3-201ENSMUST00000033547 3242 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Smarce1O54941 5330417C22Rik-202ENSMUST00000106625 5836 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Smarce1O54941 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Smarce1O54941 Gm15622-201ENSMUST00000143025 1464 ntTSL 5 BASIC13.62□□□□□ -0.23
Smarce1O54941 Gm15997-201ENSMUST00000202188 1491 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Smarce1O54941 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC13.62□□□□□ -0.23
Smarce1O54941 Zfp772-201ENSMUST00000074455 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Smarce1O54941 Lamc2-203ENSMUST00000185356 4916 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Smarce1O54941 Prdm5-204ENSMUST00000172638 1714 ntTSL 5 BASIC13.62□□□□□ -0.23
Smarce1O54941 Pdp2-201ENSMUST00000059588 5692 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Smarce1O54941 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Smarce1O54941 Ubxn10-202ENSMUST00000105810 3304 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Smarce1O54941 Uox-202ENSMUST00000121133 768 ntTSL 5 BASIC13.62□□□□□ -0.23
Smarce1O54941 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Smarce1O54941 Gm28686-201ENSMUST00000187404 609 ntBASIC13.62□□□□□ -0.23
Smarce1O54941 3110031N09Rik-201ENSMUST00000201115 326 ntBASIC13.62□□□□□ -0.23
Smarce1O54941 Gm3961-201ENSMUST00000204425 994 ntBASIC13.62□□□□□ -0.23
Smarce1O54941 Styk1-202ENSMUST00000121078 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Smarce1O54941 C030034L19Rik-203ENSMUST00000181930 3133 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Smarce1O54941 Zfp941-201ENSMUST00000080651 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Smarce1O54941 Gm38292-201ENSMUST00000192646 3045 ntBASIC13.62□□□□□ -0.23
Smarce1O54941 Cox15-201ENSMUST00000045562 4798 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Smarce1O54941 Tmem109-201ENSMUST00000038128 2188 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Smarce1O54941 Stkld1-201ENSMUST00000055406 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Smarce1O54941 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Smarce1O54941 Gm44663-201ENSMUST00000206898 3150 ntBASIC13.62□□□□□ -0.23
Smarce1O54941 Spock2-203ENSMUST00000165024 3699 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Smarce1O54941 Thbs2-201ENSMUST00000170872 5922 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Smarce1O54941 Add1-202ENSMUST00000052836 2337 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Smarce1O54941 Chil1-207ENSMUST00000153856 1839 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Smarce1O54941 Gm14005-209ENSMUST00000224993 1832 ntBASIC13.62□□□□□ -0.23
Smarce1O54941 Cd55b-201ENSMUST00000112488 1325 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Smarce1O54941 Gpr179-201ENSMUST00000093942 9219 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Smarce1O54941 Slc25a48-201ENSMUST00000021971 3374 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Smarce1O54941 Gpr146-203ENSMUST00000100514 4264 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Smarce1O54941 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Smarce1O54941 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Smarce1O54941 Gm11413-201ENSMUST00000155822 1461 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Smarce1O54941 Ktn1-220ENSMUST00000190252 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Smarce1O54941 Pip5k1a-205ENSMUST00000107233 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Smarce1O54941 Nefm-202ENSMUST00000111089 3680 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Smarce1O54941 Scaf1-206ENSMUST00000211735 4209 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Smarce1O54941 Pfkp-201ENSMUST00000021614 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Smarce1O54941 Gtf2i-216ENSMUST00000173888 2820 ntTSL 5 BASIC13.61□□□□□ -0.23
Smarce1O54941 Arhgef4-204ENSMUST00000159747 6514 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Smarce1O54941 Dmbx1-203ENSMUST00000124071 4017 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Smarce1O54941 Swap70-201ENSMUST00000033325 4027 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Smarce1O54941 Fbxo40-201ENSMUST00000075869 5137 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Smarce1O54941 Tnc-203ENSMUST00000107372 7106 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Smarce1O54941 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC13.61□□□□□ -0.23
Smarce1O54941 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Smarce1O54941 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Smarce1O54941 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Smarce1O54941 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Smarce1O54941 7530416G11Rik-201ENSMUST00000178942 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Smarce1O54941 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Smarce1O54941 Ighv5-7-201ENSMUST00000192302 244 ntBASIC13.61□□□□□ -0.23
Smarce1O54941 Gm5852-201ENSMUST00000194119 1021 ntBASIC13.61□□□□□ -0.23
Smarce1O54941 Gm45113-201ENSMUST00000207518 165 ntBASIC13.61□□□□□ -0.23
Smarce1O54941 Npff-201ENSMUST00000023814 540 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Smarce1O54941 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Smarce1O54941 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Smarce1O54941 Gm4978-201ENSMUST00000071565 801 ntBASIC13.61□□□□□ -0.23
Smarce1O54941 Poc5-201ENSMUST00000099295 5183 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Smarce1O54941 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Smarce1O54941 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Smarce1O54941 Gm19299-202ENSMUST00000215724 1435 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Smarce1O54941 Gm4593-201ENSMUST00000205334 1555 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Smarce1O54941 Ankrd55-202ENSMUST00000056047 1556 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Smarce1O54941 Rxrg-201ENSMUST00000015987 2110 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Smarce1O54941 1700061G19Rik-201ENSMUST00000025048 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Smarce1O54941 Rcor3-202ENSMUST00000110849 3791 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Smarce1O54941 Gm45206-201ENSMUST00000206885 2285 ntBASIC13.61□□□□□ -0.23
Smarce1O54941 Nr5a2-202ENSMUST00000168126 3446 ntTSL 5 BASIC13.61□□□□□ -0.23
Smarce1O54941 Slc38a3-202ENSMUST00000167868 3151 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Smarce1O54941 Trpc6-203ENSMUST00000217462 3168 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Smarce1O54941 Cit-201ENSMUST00000051704 9514 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Smarce1O54941 Kdm3a-202ENSMUST00000167220 4853 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Smarce1O54941 Aar2-202ENSMUST00000109570 2766 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Smarce1O54941 Gm38140-201ENSMUST00000193617 2755 ntBASIC13.6□□□□□ -0.23
Smarce1O54941 Cct3-208ENSMUST00000168062 1943 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Smarce1O54941 Gm45416-201ENSMUST00000209713 2201 ntBASIC13.6□□□□□ -0.23
Smarce1O54941 AC153380.1-201ENSMUST00000214959 2364 ntBASIC13.6□□□□□ -0.23
Smarce1O54941 Zbtb21-201ENSMUST00000052089 5410 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 109.6 ms