Protein–RNA interactions for Protein: O35451

Atf6b, Cyclic AMP-dependent transcription factor ATF-6 beta, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf6bO35451 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Atf6bO35451 Gm26660-202ENSMUST00000223620 4112 ntBASIC10.03□□□□□ -0.8
Atf6bO35451 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Atf6bO35451 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Atf6bO35451 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Atf6bO35451 Pip5k1b-201ENSMUST00000025800 2573 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Atf6bO35451 Zmynd11-203ENSMUST00000110634 3824 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
Atf6bO35451 Dcun1d3-202ENSMUST00000098080 3072 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Atf6bO35451 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC10.03□□□□□ -0.8
Atf6bO35451 Sema5b-201ENSMUST00000050625 4350 ntAPPRIS P2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Atf6bO35451 Tro-203ENSMUST00000112709 6610 ntAPPRIS P3 TSL 5 BASIC10.02□□□□□ -0.8
Atf6bO35451 Odf2-209ENSMUST00000113764 2450 ntAPPRIS P3 TSL 5 BASIC10.02□□□□□ -0.8
Atf6bO35451 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC10.02□□□□□ -0.8
Atf6bO35451 Gm42372-201ENSMUST00000206129 5067 ntAPPRIS P1 BASIC10.02□□□□□ -0.8
Atf6bO35451 Nectin4-201ENSMUST00000006578 3636 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Atf6bO35451 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC10.02□□□□□ -0.8
Atf6bO35451 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Atf6bO35451 Herc4-201ENSMUST00000020258 3898 ntAPPRIS P2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Atf6bO35451 Lhx9-204ENSMUST00000112026 2065 ntAPPRIS P2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Atf6bO35451 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Atf6bO35451 Hsd3b3-203ENSMUST00000107018 1443 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Atf6bO35451 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC10.02□□□□□ -0.81
Atf6bO35451 AC108858.2-201ENSMUST00000228186 1425 ntBASIC10.02□□□□□ -0.81
Atf6bO35451 Abhd18-203ENSMUST00000159774 4455 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.81
Atf6bO35451 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Atf6bO35451 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Atf6bO35451 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC10.02□□□□□ -0.81
Atf6bO35451 Gm11941-201ENSMUST00000119904 610 ntBASIC10.02□□□□□ -0.81
Atf6bO35451 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Atf6bO35451 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC10.02□□□□□ -0.81
Atf6bO35451 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC10.02□□□□□ -0.81
Atf6bO35451 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC10.02□□□□□ -0.81
Atf6bO35451 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC10.02□□□□□ -0.81
Atf6bO35451 Gm5732-201ENSMUST00000182596 1007 ntBASIC10.02□□□□□ -0.81
Atf6bO35451 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC10.02□□□□□ -0.81
Atf6bO35451 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC10.02□□□□□ -0.81
Atf6bO35451 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Atf6bO35451 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC10.02□□□□□ -0.81
Atf6bO35451 Cotl1-203ENSMUST00000211873 826 ntTSL 5 BASIC10.02□□□□□ -0.81
Atf6bO35451 AC131330.1-201ENSMUST00000227814 1015 ntBASIC10.02□□□□□ -0.81
Atf6bO35451 Ly6g5c-201ENSMUST00000037849 509 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Atf6bO35451 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Atf6bO35451 Zmynd8-220ENSMUST00000170272 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Atf6bO35451 Wnk1-204ENSMUST00000088646 8364 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Atf6bO35451 Zfp518b-203ENSMUST00000179555 6816 ntAPPRIS P1 TSL 2 BASIC10.02□□□□□ -0.81
Atf6bO35451 Gm3716-202ENSMUST00000198582 2879 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Atf6bO35451 Pex11g-201ENSMUST00000004686 2870 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Atf6bO35451 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Atf6bO35451 Crispld2-202ENSMUST00000108972 2928 ntAPPRIS P3 TSL 1 (best) BASIC10.02□□□□□ -0.81
Atf6bO35451 Samd11-201ENSMUST00000179919 2610 ntAPPRIS P2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Atf6bO35451 Fntb-201ENSMUST00000041008 2613 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Atf6bO35451 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC10.02□□□□□ -0.81
Atf6bO35451 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Atf6bO35451 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Atf6bO35451 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Atf6bO35451 Nod1-201ENSMUST00000060655 4315 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Atf6bO35451 Chek1-202ENSMUST00000172702 3797 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Atf6bO35451 Zscan10-201ENSMUST00000095595 2698 ntAPPRIS P3 TSL 1 (best) BASIC10.01□□□□□ -0.81
Atf6bO35451 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Atf6bO35451 Fam210b-201ENSMUST00000028995 3617 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Atf6bO35451 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Atf6bO35451 Gper1-201ENSMUST00000066211 2537 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Atf6bO35451 Aars2-201ENSMUST00000024733 3348 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Atf6bO35451 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Atf6bO35451 Arpp21-223ENSMUST00000162097 3952 ntAPPRIS P1 TSL 5 BASIC10.01□□□□□ -0.81
Atf6bO35451 Ces4a-201ENSMUST00000161289 2433 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Atf6bO35451 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC10.01□□□□□ -0.81
Atf6bO35451 Gm24891-201ENSMUST00000104391 136 ntBASIC10.01□□□□□ -0.81
Atf6bO35451 Gm7851-201ENSMUST00000117574 323 ntBASIC10.01□□□□□ -0.81
Atf6bO35451 Gm15207-201ENSMUST00000119259 442 ntBASIC10.01□□□□□ -0.81
Atf6bO35451 Lamr1-ps1-201ENSMUST00000119759 874 ntBASIC10.01□□□□□ -0.81
Atf6bO35451 Gm8199-201ENSMUST00000121323 823 ntBASIC10.01□□□□□ -0.81
Atf6bO35451 Gm12566-201ENSMUST00000121479 359 ntBASIC10.01□□□□□ -0.81
Atf6bO35451 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC10.01□□□□□ -0.81
Atf6bO35451 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC10.01□□□□□ -0.81
Atf6bO35451 Mir5132-201ENSMUST00000175166 71 ntBASIC10.01□□□□□ -0.81
Atf6bO35451 1700125G22Rik-201ENSMUST00000181124 861 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Atf6bO35451 Gm42682-201ENSMUST00000198349 1265 ntBASIC10.01□□□□□ -0.81
Atf6bO35451 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC10.01□□□□□ -0.81
Atf6bO35451 4933424G06Rik-204ENSMUST00000208994 1120 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Atf6bO35451 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC10.01□□□□□ -0.81
Atf6bO35451 Tmem210-201ENSMUST00000028340 516 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Atf6bO35451 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC10.01□□□□□ -0.81
Atf6bO35451 AC093022.4-203ENSMUST00000228523 2657 ntBASIC10.01□□□□□ -0.81
Atf6bO35451 Srrm4-201ENSMUST00000076124 7472 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Atf6bO35451 Amotl1-201ENSMUST00000013220 8957 ntAPPRIS P2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Atf6bO35451 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Atf6bO35451 Myo18a-222ENSMUST00000168348 6582 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Atf6bO35451 Als2-204ENSMUST00000163058 5379 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Atf6bO35451 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Atf6bO35451 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC10.01□□□□□ -0.81
Atf6bO35451 Frmd4a-216ENSMUST00000176828 4355 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Atf6bO35451 Gm9333-201ENSMUST00000205452 1323 ntBASIC10.01□□□□□ -0.81
Atf6bO35451 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC10.01□□□□□ -0.81
Atf6bO35451 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC10.01□□□□□ -0.81
Atf6bO35451 Ewsr1-201ENSMUST00000063232 1320 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Atf6bO35451 Plekhb1-205ENSMUST00000107046 2793 ntAPPRIS ALT1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Atf6bO35451 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Atf6bO35451 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Atf6bO35451 Fut4-201ENSMUST00000061498 4074 ntAPPRIS P1 BASIC10.01□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms