Protein–RNA interactions for Protein: O35134

Polr1a, DNA-directed RNA polymerase I subunit RPA1, mousemouse

Known RBP Predictions only

Length 1,717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Polr1aO35134 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Polr1aO35134 Os9-202ENSMUST00000164259 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Polr1aO35134 Papss1-205ENSMUST00000199878 2648 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Polr1aO35134 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Polr1aO35134 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Polr1aO35134 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Polr1aO35134 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC17.38■□□□□ 0.37
Polr1aO35134 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC17.38■□□□□ 0.37
Polr1aO35134 Ap1s2-203ENSMUST00000112294 3199 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Polr1aO35134 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Polr1aO35134 Gm9947-201ENSMUST00000067599 2920 ntBASIC17.37■□□□□ 0.37
Polr1aO35134 Paqr8-203ENSMUST00000187651 1463 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Polr1aO35134 Gm20758-201ENSMUST00000220339 2171 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Polr1aO35134 Ino80dos-201ENSMUST00000138611 1576 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Polr1aO35134 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Polr1aO35134 Ltc4s-201ENSMUST00000101265 480 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Polr1aO35134 Trbv31-201ENSMUST00000103300 334 ntAPPRIS ALT2 BASIC17.37■□□□□ 0.37
Polr1aO35134 Polr2j-203ENSMUST00000111129 474 ntTSL 3 BASIC17.37■□□□□ 0.37
Polr1aO35134 Gm15540-201ENSMUST00000136052 674 ntTSL 2 BASIC17.37■□□□□ 0.37
Polr1aO35134 AC160929.1-201ENSMUST00000221247 415 ntBASIC17.37■□□□□ 0.37
Polr1aO35134 AC164099.1-201ENSMUST00000227780 333 ntBASIC17.37■□□□□ 0.37
Polr1aO35134 Abi1-208ENSMUST00000139038 2899 ntAPPRIS ALT1 TSL 5 BASIC17.37■□□□□ 0.37
Polr1aO35134 Gm5766-201ENSMUST00000160520 1977 ntBASIC17.37■□□□□ 0.37
Polr1aO35134 Sept9-205ENSMUST00000106354 3869 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Polr1aO35134 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Polr1aO35134 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Polr1aO35134 Gm31938-201ENSMUST00000218081 1818 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Polr1aO35134 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Polr1aO35134 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Polr1aO35134 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Polr1aO35134 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC17.36■□□□□ 0.37
Polr1aO35134 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Polr1aO35134 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Polr1aO35134 Ankrd55-202ENSMUST00000056047 1556 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Polr1aO35134 Gm8152-201ENSMUST00000120842 637 ntBASIC17.36■□□□□ 0.37
Polr1aO35134 Gm12000-201ENSMUST00000132007 629 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Polr1aO35134 4930571N24Rik-202ENSMUST00000142914 598 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Polr1aO35134 Tnnt1-206ENSMUST00000163710 885 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Polr1aO35134 Mir6387-201ENSMUST00000184042 108 ntBASIC17.36■□□□□ 0.37
Polr1aO35134 Wbp1-209ENSMUST00000205023 716 ntBASIC17.36■□□□□ 0.37
Polr1aO35134 AC163703.1-201ENSMUST00000214133 339 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
Polr1aO35134 Gm8170-201ENSMUST00000218581 945 ntBASIC17.36■□□□□ 0.37
Polr1aO35134 Ggta1-201ENSMUST00000044255 1221 ntAPPRIS P3 TSL 5 BASIC17.36■□□□□ 0.37
Polr1aO35134 Defb29-201ENSMUST00000060598 462 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Polr1aO35134 Tex101-201ENSMUST00000078001 1059 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Polr1aO35134 AC124397.2-201ENSMUST00000225575 2215 ntBASIC17.36■□□□□ 0.37
Polr1aO35134 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Polr1aO35134 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Polr1aO35134 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Polr1aO35134 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC17.36■□□□□ 0.37
Polr1aO35134 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Polr1aO35134 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Polr1aO35134 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Polr1aO35134 Lck-208ENSMUST00000167288 2074 ntTSL 5 BASIC17.36■□□□□ 0.37
Polr1aO35134 Cpeb1-209ENSMUST00000178892 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Polr1aO35134 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Polr1aO35134 Scp2-202ENSMUST00000106701 772 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Polr1aO35134 Mir1249-201ENSMUST00000116791 98 ntBASIC17.35■□□□□ 0.37
Polr1aO35134 Smim6-201ENSMUST00000132961 978 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Polr1aO35134 Gm17226-201ENSMUST00000166637 780 ntTSL 3 BASIC17.35■□□□□ 0.37
Polr1aO35134 Ghrl-204ENSMUST00000203770 891 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Polr1aO35134 Ghrl-205ENSMUST00000204163 447 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Polr1aO35134 Cklf-210ENSMUST00000212939 737 ntAPPRIS ALT2 TSL 3 BASIC17.35■□□□□ 0.37
Polr1aO35134 Haao-201ENSMUST00000000687 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Polr1aO35134 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Polr1aO35134 Slc26a11-201ENSMUST00000050880 2695 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Polr1aO35134 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Polr1aO35134 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Polr1aO35134 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Polr1aO35134 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Polr1aO35134 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Polr1aO35134 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Polr1aO35134 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Polr1aO35134 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Polr1aO35134 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC17.35■□□□□ 0.37
Polr1aO35134 Gm24933-201ENSMUST00000103762 110 ntBASIC17.35■□□□□ 0.37
Polr1aO35134 Gm23252-201ENSMUST00000103776 110 ntBASIC17.35■□□□□ 0.37
Polr1aO35134 Mapk8-202ENSMUST00000111942 927 ntTSL 5 BASIC17.35■□□□□ 0.37
Polr1aO35134 Tstd1-201ENSMUST00000171362 551 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
Polr1aO35134 Gm26443-201ENSMUST00000179610 110 ntBASIC17.35■□□□□ 0.37
Polr1aO35134 Auts2-216ENSMUST00000185450 144 ntTSL 5 BASIC17.35■□□□□ 0.37
Polr1aO35134 Gm7445-201ENSMUST00000192115 340 ntBASIC17.35■□□□□ 0.37
Polr1aO35134 AC116680.1-201ENSMUST00000222804 613 ntTSL 3 BASIC17.35■□□□□ 0.37
Polr1aO35134 Ebi3-201ENSMUST00000003274 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Polr1aO35134 4930553M12Rik-201ENSMUST00000057837 498 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Polr1aO35134 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Polr1aO35134 Ptpn2-202ENSMUST00000120934 1497 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Polr1aO35134 Gm18806-201ENSMUST00000207607 1775 ntBASIC17.35■□□□□ 0.37
Polr1aO35134 Slc38a5-201ENSMUST00000033512 1868 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Polr1aO35134 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC17.34■□□□□ 0.37
Polr1aO35134 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Polr1aO35134 4932438H23Rik-201ENSMUST00000035689 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Polr1aO35134 Gm43127-201ENSMUST00000195890 2789 ntBASIC17.34■□□□□ 0.37
Polr1aO35134 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
Polr1aO35134 Gm23255-201ENSMUST00000102244 110 ntBASIC17.34■□□□□ 0.37
Polr1aO35134 Trav10d-201ENSMUST00000103646 406 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Polr1aO35134 Wdr31-202ENSMUST00000107452 1437 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Polr1aO35134 Camk2a-204ENSMUST00000115295 979 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Polr1aO35134 Ufd1-202ENSMUST00000115578 2078 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Polr1aO35134 Gm16209-201ENSMUST00000118457 627 ntBASIC17.34■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 44.3 ms