Protein–RNA interactions for Protein: J3QNX5

Shisa8, Cysteine-knot AMPAR-modulating protein 39, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa8J3QNX5 Tasp1-202ENSMUST00000099304 2127 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Shisa8J3QNX5 Slc9a8-201ENSMUST00000047815 4521 ntAPPRIS P3 TSL 1 (best) BASIC10.44□□□□□ -0.74
Shisa8J3QNX5 Eif3a-201ENSMUST00000025955 5176 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Shisa8J3QNX5 Fbxo8-201ENSMUST00000040218 3571 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Shisa8J3QNX5 Raver1-201ENSMUST00000115487 3470 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Shisa8J3QNX5 Kalrn-207ENSMUST00000114960 6452 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Shisa8J3QNX5 Ccdc191-201ENSMUST00000122014 1822 ntAPPRIS ALT2 TSL 5 BASIC10.44□□□□□ -0.74
Shisa8J3QNX5 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Shisa8J3QNX5 4732490B19Rik-201ENSMUST00000130373 2446 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Shisa8J3QNX5 Ano10-203ENSMUST00000214409 2384 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Shisa8J3QNX5 Camk2g-201ENSMUST00000071816 3703 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Shisa8J3QNX5 Nsl1-202ENSMUST00000078259 4879 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Shisa8J3QNX5 Pcsk9-201ENSMUST00000049507 3521 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Shisa8J3QNX5 Anxa7-201ENSMUST00000065504 2851 ntAPPRIS P2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Shisa8J3QNX5 Gm5703-201ENSMUST00000186658 3973 ntBASIC10.43□□□□□ -0.74
Shisa8J3QNX5 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Shisa8J3QNX5 Ddx52-201ENSMUST00000049257 3194 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Shisa8J3QNX5 Glb1l2-207ENSMUST00000162702 2555 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Shisa8J3QNX5 Eef2k-201ENSMUST00000047875 6580 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Shisa8J3QNX5 AC171277.1-201ENSMUST00000216902 1441 ntBASIC10.43□□□□□ -0.74
Shisa8J3QNX5 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Shisa8J3QNX5 Cox15-201ENSMUST00000045562 4798 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Shisa8J3QNX5 Olfr370-203ENSMUST00000214156 2475 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
Shisa8J3QNX5 Gm38115-201ENSMUST00000194317 2413 ntTSL 5 BASIC10.43□□□□□ -0.74
Shisa8J3QNX5 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Shisa8J3QNX5 Gtf3c1-204ENSMUST00000205659 6570 ntAPPRIS ALT2 TSL 5 BASIC10.43□□□□□ -0.74
Shisa8J3QNX5 Gm35021-201ENSMUST00000210105 2329 ntTSL 5 BASIC10.43□□□□□ -0.74
Shisa8J3QNX5 Parp14-201ENSMUST00000042665 7417 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Shisa8J3QNX5 Mamdc2-201ENSMUST00000036069 3338 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Shisa8J3QNX5 AA474408-201ENSMUST00000098110 3339 ntBASIC10.43□□□□□ -0.74
Shisa8J3QNX5 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC10.43□□□□□ -0.74
Shisa8J3QNX5 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC10.43□□□□□ -0.74
Shisa8J3QNX5 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Shisa8J3QNX5 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC10.43□□□□□ -0.74
Shisa8J3QNX5 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC10.43□□□□□ -0.74
Shisa8J3QNX5 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Shisa8J3QNX5 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Shisa8J3QNX5 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Shisa8J3QNX5 Gm5370-201ENSMUST00000187187 574 ntBASIC10.43□□□□□ -0.74
Shisa8J3QNX5 Gm43438-201ENSMUST00000198133 379 ntBASIC10.43□□□□□ -0.74
Shisa8J3QNX5 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC10.43□□□□□ -0.74
Shisa8J3QNX5 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Shisa8J3QNX5 CT010486.3-201ENSMUST00000224555 811 ntBASIC10.43□□□□□ -0.74
Shisa8J3QNX5 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Shisa8J3QNX5 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Shisa8J3QNX5 Vmn1r222-201ENSMUST00000077116 1054 ntAPPRIS P1 BASIC10.43□□□□□ -0.74
Shisa8J3QNX5 Gm10436-202ENSMUST00000220521 1788 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Shisa8J3QNX5 Wif1-203ENSMUST00000175867 2183 ntTSL 5 BASIC10.43□□□□□ -0.74
Shisa8J3QNX5 Acvrl1-201ENSMUST00000000542 3640 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Shisa8J3QNX5 Gm10912-201ENSMUST00000104891 1661 ntAPPRIS P1 BASIC10.43□□□□□ -0.74
Shisa8J3QNX5 Pfkfb2-208ENSMUST00000187089 1690 ntAPPRIS ALT2 TSL 5 BASIC10.43□□□□□ -0.74
Shisa8J3QNX5 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Shisa8J3QNX5 Dzip1l-204ENSMUST00000112886 3970 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Shisa8J3QNX5 Dclk3-201ENSMUST00000111879 3005 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Shisa8J3QNX5 Gm38901-201ENSMUST00000202448 3008 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Shisa8J3QNX5 Tgfb1i1-201ENSMUST00000070656 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Shisa8J3QNX5 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Shisa8J3QNX5 Tgif1-201ENSMUST00000059775 1631 ntAPPRIS P3 TSL 1 (best) BASIC10.43□□□□□ -0.74
Shisa8J3QNX5 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Shisa8J3QNX5 Gsdmc2-202ENSMUST00000188404 2078 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Shisa8J3QNX5 Dld-201ENSMUST00000110857 2544 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Shisa8J3QNX5 Gpr17-201ENSMUST00000064016 5195 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Shisa8J3QNX5 Ppp1r10-201ENSMUST00000087210 4222 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Shisa8J3QNX5 Actl7a-201ENSMUST00000095079 1513 ntAPPRIS P1 BASIC10.43□□□□□ -0.74
Shisa8J3QNX5 Rgs8-201ENSMUST00000041776 8474 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Shisa8J3QNX5 Ap1b1-201ENSMUST00000009234 4085 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Shisa8J3QNX5 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC10.42□□□□□ -0.74
Shisa8J3QNX5 Dnm3-202ENSMUST00000086074 7523 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
Shisa8J3QNX5 Gm8110-202ENSMUST00000211297 1782 ntTSL 5 BASIC10.42□□□□□ -0.74
Shisa8J3QNX5 Sorbs3-201ENSMUST00000022682 2914 ntAPPRIS P2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Shisa8J3QNX5 Rxfp2-201ENSMUST00000065745 2539 ntAPPRIS P3 TSL 1 (best) BASIC10.42□□□□□ -0.74
Shisa8J3QNX5 Dpt-201ENSMUST00000027861 1724 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Shisa8J3QNX5 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Shisa8J3QNX5 Gm43375-201ENSMUST00000196705 2480 ntBASIC10.42□□□□□ -0.74
Shisa8J3QNX5 AC169511.2-201ENSMUST00000226674 2063 ntBASIC10.42□□□□□ -0.74
Shisa8J3QNX5 Zfp454-201ENSMUST00000050595 2059 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Shisa8J3QNX5 Lman1-201ENSMUST00000048260 3563 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Shisa8J3QNX5 Gal3st4-201ENSMUST00000100530 3162 ntAPPRIS P3 TSL 1 (best) BASIC10.42□□□□□ -0.74
Shisa8J3QNX5 Ces3b-202ENSMUST00000093221 2403 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Shisa8J3QNX5 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
Shisa8J3QNX5 Gm6559-201ENSMUST00000204678 1694 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Shisa8J3QNX5 Pias2-203ENSMUST00000168882 4984 ntAPPRIS P4 TSL 1 (best) BASIC10.42□□□□□ -0.74
Shisa8J3QNX5 Ift88os-201ENSMUST00000149702 2016 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Shisa8J3QNX5 Ranbp10-201ENSMUST00000041400 5308 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Shisa8J3QNX5 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Shisa8J3QNX5 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Shisa8J3QNX5 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC10.42□□□□□ -0.74
Shisa8J3QNX5 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Shisa8J3QNX5 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
Shisa8J3QNX5 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC10.42□□□□□ -0.74
Shisa8J3QNX5 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Shisa8J3QNX5 Gm10608-202ENSMUST00000213924 676 ntBASIC10.42□□□□□ -0.74
Shisa8J3QNX5 AC102569.1-201ENSMUST00000221563 685 ntBASIC10.42□□□□□ -0.74
Shisa8J3QNX5 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Shisa8J3QNX5 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Shisa8J3QNX5 Gm9823-201ENSMUST00000051212 327 ntBASIC10.42□□□□□ -0.74
Shisa8J3QNX5 Gm5455-201ENSMUST00000058710 715 ntBASIC10.42□□□□□ -0.74
Shisa8J3QNX5 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Shisa8J3QNX5 Rad1-202ENSMUST00000100775 4085 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Shisa8J3QNX5 Dhx34-202ENSMUST00000118795 4076 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 70.7 ms