Protein–RNA interactions for Protein: J3QNE4

Ccdc180, Coiled-coil domain-containing 180, mousemouse

Predictions only

Length 1,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc180J3QNE4 n-R5s103-201ENSMUST00000178755 119 ntBASIC20.68■□□□□ 0.9
Ccdc180J3QNE4 n-R5s123-201ENSMUST00000178804 119 ntBASIC20.68■□□□□ 0.9
Ccdc180J3QNE4 n-R5s142-201ENSMUST00000178820 119 ntBASIC20.68■□□□□ 0.9
Ccdc180J3QNE4 n-R5s144-201ENSMUST00000178859 119 ntBASIC20.68■□□□□ 0.9
Ccdc180J3QNE4 n-R5s139-201ENSMUST00000178975 119 ntBASIC20.68■□□□□ 0.9
Ccdc180J3QNE4 n-R5s134-201ENSMUST00000178983 119 ntBASIC20.68■□□□□ 0.9
Ccdc180J3QNE4 n-R5s136-201ENSMUST00000179080 119 ntBASIC20.68■□□□□ 0.9
Ccdc180J3QNE4 Gm25018-201ENSMUST00000179081 119 ntBASIC20.68■□□□□ 0.9
Ccdc180J3QNE4 n-R5s104-201ENSMUST00000179107 119 ntBASIC20.68■□□□□ 0.9
Ccdc180J3QNE4 n-R5s113-201ENSMUST00000179143 119 ntBASIC20.68■□□□□ 0.9
Ccdc180J3QNE4 n-R5s133-201ENSMUST00000179275 119 ntBASIC20.68■□□□□ 0.9
Ccdc180J3QNE4 n-R5s117-201ENSMUST00000179431 119 ntBASIC20.68■□□□□ 0.9
Ccdc180J3QNE4 Gm25212-201ENSMUST00000179432 119 ntBASIC20.68■□□□□ 0.9
Ccdc180J3QNE4 n-R5s138-201ENSMUST00000179476 119 ntBASIC20.68■□□□□ 0.9
Ccdc180J3QNE4 n-R5s122-201ENSMUST00000179500 119 ntBASIC20.68■□□□□ 0.9
Ccdc180J3QNE4 n-R5s143-201ENSMUST00000179542 119 ntBASIC20.68■□□□□ 0.9
Ccdc180J3QNE4 n-R5s107-201ENSMUST00000179704 119 ntBASIC20.68■□□□□ 0.9
Ccdc180J3QNE4 Gm26391-201ENSMUST00000179843 119 ntBASIC20.68■□□□□ 0.9
Ccdc180J3QNE4 n-R5s110-201ENSMUST00000179995 119 ntBASIC20.68■□□□□ 0.9
Ccdc180J3QNE4 n-R5s128-201ENSMUST00000180096 119 ntBASIC20.68■□□□□ 0.9
Ccdc180J3QNE4 n-R5s124-201ENSMUST00000180334 119 ntBASIC20.68■□□□□ 0.9
Ccdc180J3QNE4 Gm7627-201ENSMUST00000183205 999 ntBASIC20.68■□□□□ 0.9
Ccdc180J3QNE4 Gm37207-201ENSMUST00000194284 296 ntBASIC20.68■□□□□ 0.9
Ccdc180J3QNE4 Gm37452-201ENSMUST00000194416 1160 ntBASIC20.68■□□□□ 0.9
Ccdc180J3QNE4 Gm26782-203ENSMUST00000227103 751 ntBASIC20.68■□□□□ 0.9
Ccdc180J3QNE4 Olfr1015-201ENSMUST00000047870 1016 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Ccdc180J3QNE4 Olfr372-201ENSMUST00000093434 1016 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Ccdc180J3QNE4 Gm24089-201ENSMUST00000093696 109 ntBASIC20.68■□□□□ 0.9
Ccdc180J3QNE4 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ccdc180J3QNE4 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ccdc180J3QNE4 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Ccdc180J3QNE4 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ccdc180J3QNE4 2310043M15Rik-201ENSMUST00000180967 1580 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Ccdc180J3QNE4 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Ccdc180J3QNE4 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ccdc180J3QNE4 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ccdc180J3QNE4 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ccdc180J3QNE4 Gm44573-201ENSMUST00000191753 2370 ntBASIC20.68■□□□□ 0.9
Ccdc180J3QNE4 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ccdc180J3QNE4 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ccdc180J3QNE4 Il34-201ENSMUST00000076846 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ccdc180J3QNE4 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ccdc180J3QNE4 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ccdc180J3QNE4 Pfn1-202ENSMUST00000108549 608 ntTSL 2 BASIC20.67■□□□□ 0.9
Ccdc180J3QNE4 Tnfrsf14-201ENSMUST00000123514 1018 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ccdc180J3QNE4 Mrgpra2a-201ENSMUST00000159004 1240 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ccdc180J3QNE4 Gm44498-201ENSMUST00000199509 111 ntBASIC20.67■□□□□ 0.9
Ccdc180J3QNE4 Itgax-203ENSMUST00000205460 1215 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Ccdc180J3QNE4 Gm3318-201ENSMUST00000217604 1183 ntBASIC20.67■□□□□ 0.9
Ccdc180J3QNE4 AC099934.4-201ENSMUST00000220745 523 ntTSL 5 BASIC20.67■□□□□ 0.9
Ccdc180J3QNE4 Zfp286-202ENSMUST00000108705 1979 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Ccdc180J3QNE4 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ccdc180J3QNE4 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ccdc180J3QNE4 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ccdc180J3QNE4 Gm44740-201ENSMUST00000205603 1614 ntBASIC20.67■□□□□ 0.9
Ccdc180J3QNE4 Triml2-202ENSMUST00000209200 1519 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ccdc180J3QNE4 Ces2f-203ENSMUST00000212926 1430 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Ccdc180J3QNE4 Snord17-201ENSMUST00000104526 238 ntBASIC20.67■□□□□ 0.9
Ccdc180J3QNE4 Gm13709-201ENSMUST00000138573 614 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Ccdc180J3QNE4 Pax5-209ENSMUST00000165417 1056 ntTSL 5 BASIC20.67■□□□□ 0.9
Ccdc180J3QNE4 Gm37723-201ENSMUST00000194480 565 ntBASIC20.67■□□□□ 0.9
Ccdc180J3QNE4 D730050B12Rik-201ENSMUST00000223149 585 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Ccdc180J3QNE4 Tcl1b5-201ENSMUST00000000717 1055 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ccdc180J3QNE4 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ccdc180J3QNE4 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC20.67■□□□□ 0.9
Ccdc180J3QNE4 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC20.67■□□□□ 0.9
Ccdc180J3QNE4 Gm3836-201ENSMUST00000211377 1613 ntBASIC20.66■□□□□ 0.9
Ccdc180J3QNE4 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ccdc180J3QNE4 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ccdc180J3QNE4 Srpk3-201ENSMUST00000002081 1981 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ccdc180J3QNE4 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ccdc180J3QNE4 Gm44153-201ENSMUST00000204162 1580 ntBASIC20.66■□□□□ 0.9
Ccdc180J3QNE4 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ccdc180J3QNE4 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC20.66■□□□□ 0.9
Ccdc180J3QNE4 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ccdc180J3QNE4 Ighv1-58-201ENSMUST00000103529 351 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Ccdc180J3QNE4 Gm11952-201ENSMUST00000121172 821 ntBASIC20.66■□□□□ 0.9
Ccdc180J3QNE4 Gm8601-201ENSMUST00000182096 909 ntBASIC20.66■□□□□ 0.9
Ccdc180J3QNE4 4930557B06Rik-201ENSMUST00000200193 381 ntBASIC20.66■□□□□ 0.9
Ccdc180J3QNE4 Gm7238-201ENSMUST00000206467 973 ntBASIC20.66■□□□□ 0.9
Ccdc180J3QNE4 1700086D15Rik-201ENSMUST00000020855 1092 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Ccdc180J3QNE4 Gm45682-201ENSMUST00000209434 1256 ntTSL 5 BASIC20.66■□□□□ 0.9
Ccdc180J3QNE4 Eef1akmt1-201ENSMUST00000022518 880 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ccdc180J3QNE4 H2-Aa-201ENSMUST00000040655 1132 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ccdc180J3QNE4 Slc44a4-202ENSMUST00000169230 2246 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Ccdc180J3QNE4 Rufy2-204ENSMUST00000131718 2816 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Ccdc180J3QNE4 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ccdc180J3QNE4 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
Ccdc180J3QNE4 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
Ccdc180J3QNE4 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ccdc180J3QNE4 Impdh2-ps-201ENSMUST00000120826 1545 ntBASIC20.65■□□□□ 0.9
Ccdc180J3QNE4 Gm14592-201ENSMUST00000117201 560 ntBASIC20.65■□□□□ 0.9
Ccdc180J3QNE4 Bnip2-208ENSMUST00000165389 945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ccdc180J3QNE4 4930578M01Rik-201ENSMUST00000180490 907 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Ccdc180J3QNE4 Gm42779-201ENSMUST00000198807 406 ntBASIC20.65■□□□□ 0.9
Ccdc180J3QNE4 Lsm8-204ENSMUST00000201141 503 ntTSL 3 BASIC20.65■□□□□ 0.9
Ccdc180J3QNE4 Olfr56-203ENSMUST00000179282 1935 ntTSL 5 BASIC20.65■□□□□ 0.9
Ccdc180J3QNE4 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Ccdc180J3QNE4 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ccdc180J3QNE4 Tbp-203ENSMUST00000118001 1652 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 48.5 ms