Protein–RNA interactions for Protein: G3X9Z4

Pcf11, Cleavage and polyadenylation factor subunit homolog (S. cerevisiae), mousemouse

Predictions only

Length 1,553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcf11G3X9Z4 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC17.11■□□□□ 0.33
Pcf11G3X9Z4 Myl3-202ENSMUST00000124267 575 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Pcf11G3X9Z4 Slfn5os-201ENSMUST00000127074 574 ntTSL 2 BASIC17.11■□□□□ 0.33
Pcf11G3X9Z4 4930571N24Rik-202ENSMUST00000142914 598 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Pcf11G3X9Z4 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Pcf11G3X9Z4 Bnip2-208ENSMUST00000165389 945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcf11G3X9Z4 U2af1l4-218ENSMUST00000166960 747 ntTSL 3 BASIC17.11■□□□□ 0.33
Pcf11G3X9Z4 Nat8f6-201ENSMUST00000087656 925 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcf11G3X9Z4 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Pcf11G3X9Z4 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcf11G3X9Z4 Samd13-202ENSMUST00000125965 1590 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Pcf11G3X9Z4 4921524J17Rik-201ENSMUST00000047749 1587 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcf11G3X9Z4 Aldoa-202ENSMUST00000087566 1549 ntTSL 5 BASIC17.1■□□□□ 0.33
Pcf11G3X9Z4 Clu-201ENSMUST00000022616 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcf11G3X9Z4 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Pcf11G3X9Z4 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcf11G3X9Z4 Ikzf2-202ENSMUST00000187184 2013 ntTSL 5 BASIC17.1■□□□□ 0.33
Pcf11G3X9Z4 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcf11G3X9Z4 Ubap2l-201ENSMUST00000029553 3509 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcf11G3X9Z4 Cage1-201ENSMUST00000074969 2856 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Pcf11G3X9Z4 Psapl1-201ENSMUST00000052224 2548 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Pcf11G3X9Z4 Gm35363-201ENSMUST00000209330 1317 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Pcf11G3X9Z4 Xpc-201ENSMUST00000032182 3634 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcf11G3X9Z4 Ikbkg-204ENSMUST00000114128 1867 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
Pcf11G3X9Z4 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcf11G3X9Z4 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcf11G3X9Z4 Cbx7-202ENSMUST00000109615 710 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Pcf11G3X9Z4 Gm12463-201ENSMUST00000118271 849 ntBASIC17.1■□□□□ 0.33
Pcf11G3X9Z4 Gm5764-201ENSMUST00000118817 885 ntBASIC17.1■□□□□ 0.33
Pcf11G3X9Z4 Gm13558-201ENSMUST00000140464 554 ntTSL 2 BASIC17.1■□□□□ 0.33
Pcf11G3X9Z4 Gm13449-201ENSMUST00000153559 1231 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Pcf11G3X9Z4 Gm26119-201ENSMUST00000175601 104 ntBASIC17.1■□□□□ 0.33
Pcf11G3X9Z4 Mir8091-201ENSMUST00000183602 139 ntBASIC17.1■□□□□ 0.33
Pcf11G3X9Z4 Gm7255-201ENSMUST00000187371 908 ntBASIC17.1■□□□□ 0.33
Pcf11G3X9Z4 Gm19918-201ENSMUST00000194858 400 ntBASIC17.1■□□□□ 0.33
Pcf11G3X9Z4 Gm42779-201ENSMUST00000198807 406 ntBASIC17.1■□□□□ 0.33
Pcf11G3X9Z4 Gm44507-201ENSMUST00000206249 343 ntTSL 5 BASIC17.1■□□□□ 0.33
Pcf11G3X9Z4 Gm45258-201ENSMUST00000210042 853 ntBASIC17.1■□□□□ 0.33
Pcf11G3X9Z4 AC134793.1-202ENSMUST00000227444 803 ntBASIC17.1■□□□□ 0.33
Pcf11G3X9Z4 Dntt-201ENSMUST00000051806 2128 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Pcf11G3X9Z4 Scpep1-201ENSMUST00000000287 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcf11G3X9Z4 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcf11G3X9Z4 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcf11G3X9Z4 AC022682.1-201ENSMUST00000224624 2023 ntBASIC17.1■□□□□ 0.33
Pcf11G3X9Z4 Plscr1-202ENSMUST00000186364 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcf11G3X9Z4 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcf11G3X9Z4 Pdcl-202ENSMUST00000112940 3056 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcf11G3X9Z4 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcf11G3X9Z4 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Pcf11G3X9Z4 Gm42970-201ENSMUST00000196407 1352 ntBASIC17.09■□□□□ 0.33
Pcf11G3X9Z4 Gm13722-201ENSMUST00000117964 3066 ntBASIC17.09■□□□□ 0.33
Pcf11G3X9Z4 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcf11G3X9Z4 Mindy1-201ENSMUST00000039537 2800 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Pcf11G3X9Z4 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcf11G3X9Z4 Acsm2-202ENSMUST00000098084 2099 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Pcf11G3X9Z4 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcf11G3X9Z4 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcf11G3X9Z4 Gm13027-201ENSMUST00000135858 241 ntTSL 5 BASIC17.09■□□□□ 0.33
Pcf11G3X9Z4 Gm13817-201ENSMUST00000142249 604 ntTSL 3 BASIC17.09■□□□□ 0.33
Pcf11G3X9Z4 Mrto4-ps2-201ENSMUST00000164169 549 ntBASIC17.09■□□□□ 0.33
Pcf11G3X9Z4 Tex29-204ENSMUST00000166638 561 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
Pcf11G3X9Z4 Gm43610-201ENSMUST00000199117 365 ntBASIC17.09■□□□□ 0.33
Pcf11G3X9Z4 Gm44498-201ENSMUST00000199509 111 ntBASIC17.09■□□□□ 0.33
Pcf11G3X9Z4 4930557B06Rik-201ENSMUST00000200193 381 ntBASIC17.09■□□□□ 0.33
Pcf11G3X9Z4 AC138716.2-201ENSMUST00000226670 1016 ntBASIC17.09■□□□□ 0.33
Pcf11G3X9Z4 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC17.09■□□□□ 0.33
Pcf11G3X9Z4 Ss18l2-206ENSMUST00000215966 2316 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Pcf11G3X9Z4 Gm15965-201ENSMUST00000123318 1428 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Pcf11G3X9Z4 Tubb1-201ENSMUST00000016399 1406 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcf11G3X9Z4 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcf11G3X9Z4 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcf11G3X9Z4 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Pcf11G3X9Z4 Gatb-203ENSMUST00000107674 1980 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Pcf11G3X9Z4 Wif1-203ENSMUST00000175867 2183 ntTSL 5 BASIC17.08■□□□□ 0.33
Pcf11G3X9Z4 Hsd3b3-204ENSMUST00000107019 1533 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
Pcf11G3X9Z4 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC17.08■□□□□ 0.33
Pcf11G3X9Z4 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Pcf11G3X9Z4 Bpifb1-202ENSMUST00000081816 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pcf11G3X9Z4 Gm25998-201ENSMUST00000175397 53 ntBASIC17.08■□□□□ 0.32
Pcf11G3X9Z4 9530085P06Rik-201ENSMUST00000182121 827 ntBASIC17.08■□□□□ 0.32
Pcf11G3X9Z4 Gm27440-201ENSMUST00000184785 107 ntBASIC17.08■□□□□ 0.32
Pcf11G3X9Z4 Mmp7-201ENSMUST00000018767 1068 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pcf11G3X9Z4 Gm7183-201ENSMUST00000213870 1005 ntBASIC17.08■□□□□ 0.32
Pcf11G3X9Z4 E230034D01Rik-203ENSMUST00000217357 1159 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Pcf11G3X9Z4 Gm8170-201ENSMUST00000218581 945 ntBASIC17.08■□□□□ 0.32
Pcf11G3X9Z4 Mrpl33-201ENSMUST00000031024 478 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pcf11G3X9Z4 Defa3-201ENSMUST00000098893 410 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pcf11G3X9Z4 Rasgrp4-208ENSMUST00000161522 3242 ntTSL 5 BASIC17.08■□□□□ 0.32
Pcf11G3X9Z4 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pcf11G3X9Z4 Tex45-201ENSMUST00000047265 1613 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Pcf11G3X9Z4 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pcf11G3X9Z4 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pcf11G3X9Z4 AC122811.1-201ENSMUST00000222257 2921 ntBASIC17.08■□□□□ 0.32
Pcf11G3X9Z4 Gm5766-201ENSMUST00000160520 1977 ntBASIC17.08■□□□□ 0.32
Pcf11G3X9Z4 Slc10a1-202ENSMUST00000218162 1749 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pcf11G3X9Z4 Metap2-208ENSMUST00000181091 1876 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Pcf11G3X9Z4 Prg4-201ENSMUST00000006171 1869 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Pcf11G3X9Z4 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pcf11G3X9Z4 Dglucy-202ENSMUST00000110069 3058 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcf11G3X9Z4 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 156.4 ms