Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
NpcdF8VQB8 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
NpcdF8VQB8 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
NpcdF8VQB8 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
NpcdF8VQB8 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
NpcdF8VQB8 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
NpcdF8VQB8 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC13.86□□□□□ -0.19
NpcdF8VQB8 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
NpcdF8VQB8 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
NpcdF8VQB8 Rpl22-204ENSMUST00000139685 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
NpcdF8VQB8 Gm45218-201ENSMUST00000205533 1678 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
NpcdF8VQB8 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
NpcdF8VQB8 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
NpcdF8VQB8 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
NpcdF8VQB8 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
NpcdF8VQB8 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
NpcdF8VQB8 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC13.86□□□□□ -0.19
NpcdF8VQB8 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
NpcdF8VQB8 Krt40-202ENSMUST00000107443 1080 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
NpcdF8VQB8 Gm14165-201ENSMUST00000121456 952 ntBASIC13.86□□□□□ -0.19
NpcdF8VQB8 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
NpcdF8VQB8 Tnfrsf14-201ENSMUST00000123514 1018 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
NpcdF8VQB8 Pradc1-204ENSMUST00000126805 953 ntTSL 2 BASIC13.86□□□□□ -0.19
NpcdF8VQB8 Gm14255-201ENSMUST00000128846 248 ntTSL 5 BASIC13.86□□□□□ -0.19
NpcdF8VQB8 Slc1a3-208ENSMUST00000157065 728 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
NpcdF8VQB8 Cdhr4-208ENSMUST00000176373 492 ntTSL 5 BASIC13.86□□□□□ -0.19
NpcdF8VQB8 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC13.86□□□□□ -0.19
NpcdF8VQB8 Vmn1r206-201ENSMUST00000187140 1135 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
NpcdF8VQB8 Gm4034-201ENSMUST00000187674 480 ntBASIC13.86□□□□□ -0.19
NpcdF8VQB8 Prrg2-211ENSMUST00000211337 676 ntTSL 3 BASIC13.86□□□□□ -0.19
NpcdF8VQB8 Gm40910-202ENSMUST00000223077 569 ntTSL 5 BASIC13.86□□□□□ -0.19
NpcdF8VQB8 Rhno1-207ENSMUST00000223237 1081 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
NpcdF8VQB8 AC154436.1-201ENSMUST00000227272 782 ntBASIC13.86□□□□□ -0.19
NpcdF8VQB8 Crygf-201ENSMUST00000027082 627 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
NpcdF8VQB8 Hddc2-201ENSMUST00000000304 858 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
NpcdF8VQB8 Atp5s-204ENSMUST00000220916 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
NpcdF8VQB8 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
NpcdF8VQB8 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
NpcdF8VQB8 Uba1y-ps1-201ENSMUST00000188314 1708 ntBASIC13.86□□□□□ -0.19
NpcdF8VQB8 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
NpcdF8VQB8 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
NpcdF8VQB8 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC13.86□□□□□ -0.19
NpcdF8VQB8 Gm9415-201ENSMUST00000200462 1321 ntBASIC13.86□□□□□ -0.19
NpcdF8VQB8 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
NpcdF8VQB8 4933406C10Rik-201ENSMUST00000180391 1451 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
NpcdF8VQB8 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
NpcdF8VQB8 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
NpcdF8VQB8 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
NpcdF8VQB8 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
NpcdF8VQB8 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC13.85□□□□□ -0.19
NpcdF8VQB8 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
NpcdF8VQB8 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
NpcdF8VQB8 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
NpcdF8VQB8 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
NpcdF8VQB8 D430013B06Rik-201ENSMUST00000192922 1872 ntBASIC13.85□□□□□ -0.19
NpcdF8VQB8 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC13.85□□□□□ -0.19
NpcdF8VQB8 Fopnl-202ENSMUST00000120707 1414 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
NpcdF8VQB8 Gm23769-201ENSMUST00000104441 121 ntBASIC13.85□□□□□ -0.19
NpcdF8VQB8 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC13.85□□□□□ -0.19
NpcdF8VQB8 Apoc3-202ENSMUST00000118649 453 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
NpcdF8VQB8 Tspan32os-201ENSMUST00000131740 975 ntTSL 2 BASIC13.85□□□□□ -0.19
NpcdF8VQB8 Gm7238-201ENSMUST00000206467 973 ntBASIC13.85□□□□□ -0.19
NpcdF8VQB8 Gm2448-201ENSMUST00000207080 559 ntBASIC13.85□□□□□ -0.19
NpcdF8VQB8 Gm45469-201ENSMUST00000210468 854 ntTSL 3 BASIC13.85□□□□□ -0.19
NpcdF8VQB8 Gm7192-201ENSMUST00000210793 1137 ntBASIC13.85□□□□□ -0.19
NpcdF8VQB8 E230014E18Rik-201ENSMUST00000215920 859 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
NpcdF8VQB8 Gm46224-201ENSMUST00000220221 1242 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
NpcdF8VQB8 AC152169.1-201ENSMUST00000223901 701 ntBASIC13.85□□□□□ -0.19
NpcdF8VQB8 Olfr435-201ENSMUST00000058118 942 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
NpcdF8VQB8 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC13.85□□□□□ -0.19
NpcdF8VQB8 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
NpcdF8VQB8 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
NpcdF8VQB8 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
NpcdF8VQB8 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
NpcdF8VQB8 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
NpcdF8VQB8 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
NpcdF8VQB8 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
NpcdF8VQB8 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
NpcdF8VQB8 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
NpcdF8VQB8 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
NpcdF8VQB8 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
NpcdF8VQB8 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
NpcdF8VQB8 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
NpcdF8VQB8 Gm43447-201ENSMUST00000198471 1535 ntBASIC13.85□□□□□ -0.19
NpcdF8VQB8 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
NpcdF8VQB8 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC13.85□□□□□ -0.19
NpcdF8VQB8 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
NpcdF8VQB8 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
NpcdF8VQB8 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
NpcdF8VQB8 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
NpcdF8VQB8 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
NpcdF8VQB8 Gm18642-201ENSMUST00000206642 1400 ntBASIC13.84□□□□□ -0.19
NpcdF8VQB8 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
NpcdF8VQB8 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
NpcdF8VQB8 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
NpcdF8VQB8 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
NpcdF8VQB8 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
NpcdF8VQB8 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
NpcdF8VQB8 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC13.84□□□□□ -0.19
NpcdF8VQB8 Ifna9-201ENSMUST00000102807 573 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms